Common variants at the MHC locus and at chromosome 16q24.1 predispose to Barrett's esophagus. / Su, Zhan; Gay, Laura J.; Strange, Amy; Palles, Claire; Band, Gavin; Whiteman, David C.; Lescai, Francesco; Langford, Cordelia; Nanji, Manoj; Edkins, Sarah; Van Der Winkel, Anouk; Levine, David; Sasieni, Peter; Bellenguez, Celine; Howarth, Kimberley; Freeman, Colin; Trudgill, Nigel; Tucker, Art T.; Pirinen, Matti; Peppelenbosch, Maikel P.; Van Der Laan, Luc J.W.; Kuipers, Ernst J.; Drenth, Joost P.H.; Peters, Wilbert H.; Reynolds, John V.; Kelleher, Dermot P.; McManus, Ross; Grabsch, Heike; Prenen, Hans; Bisschops, Raf; Krishnadath, Kausila; Siersema, Peter D.; Van Baal, Jantine W.P.M.; Middleton, Mark; Petty, Russell; Gillies, Richard; Burch, Nicola; Bhandari, Pradeep; Paterson, Stuart; Edwards, Cathryn; Penman, Ian; Vaidya, Kishor; Ang, Yeng; Murray, Iain; Patel, Praful; Ye, Weimin; Mullins, Paul; Wu, Anna H.; Bird, Nigel C.; Dallal, Helen; Shaheen, Nicholas J.; Murray, Liam J.; Koss, Konrad; Bernstein, Leslie; Romero, Yvonne; Hardie, Laura J.; Zhang, Rui; Winter, Helen; Corley, Douglas .A.; Panter, Simon; Risch, Harvey A.; Reid, Brian J.; Sargeant, Ian; Gammon, Marilie D.; Smart, Howard; Dhar, Anjan; McMurtry, Hugh; Ali, Haythem; Liu, Geoffrey; Casson, Allan G.; Chow, Wong-Ho; Rutter, Matt; Tawil, Ashref; Morris, Danielle; Nwokolo, Chuka; Isaacs, Peter; Rodgers, Colin; Ragunath, Krish; MacDonald, Chris; Haigh, Chris; Monk, David; Davies, Gareth; Wajed, Saj; Johnston, David; Gibbons, Michael; Cullen, Sue; Church, Nicholas; Langley, Ruth; Griffin, Michael; Alderson, Derek; Deloukas, Panos; Hunt, Sarah E.; Gray, Emma; Dronov, Serge; Potter, Simon C.; Tashakkori-Ghanbaria, Avazeh; Anderson, Mark; Brooks, Claire; Blackwell, Jenefer M.; Bramon, Elvira; Brown, Mathew A.; Casas, Juan P.; Corvin, Aiden; Duncanson, Audrey; Markus, Hugh S.; Mathew, Christopher G.; Palmer, Colin N.A.; Plomin, Robert; Rautanen, Anna; Sawcer, Stephen J.; Trembath, Richard C.; Viswanathan, Ananth C.; Wood, Nicholas; Trynka, Gosia; Wijmenga, Cisca; Cazier, Jean-Baptiste; Atherfold, Paul; Nicholson, Anna M.; Gellatly, Nichola L.; Glancy, Deborah; Cooper, Sheldon C.; Cunningham, David; Lind, Tore; Hapeshi, Julie; Ferry, David; Rathbone, Barrie; Brown, Julia; Love, Sharon; Attwood, Stephen; MacGregor, Stuart; Watson, Peter; Sanders, Scott; Ek, Weronica; Harrison, Rebecca F.; Moayyedi, Paul; De Caestecker, John; Barr, Hugh; Stupka, Elia; Vaughan, Thomas L.; Peltonen, Leena; Spencer, Chris C.A.; Tomlinson, Ian; Donnelly, Peter; Jankowski, Janus A.Z.
In: Nature Genetics, Vol. 44, No. 10, 2012, p. 1131-1136.Research output: Contribution to journal › Article
}
TY - JOUR
T1 - Common variants at the MHC locus and at chromosome 16q24.1 predispose to Barrett's esophagus
A1 - Su,Zhan
A1 - Gay,Laura J.
A1 - Strange,Amy
A1 - Palles,Claire
A1 - Band,Gavin
A1 - Whiteman,David C.
A1 - Lescai,Francesco
A1 - Langford,Cordelia
A1 - Nanji,Manoj
A1 - Edkins,Sarah
A1 - Van Der Winkel,Anouk
A1 - Levine,David
A1 - Sasieni,Peter
A1 - Bellenguez,Celine
A1 - Howarth,Kimberley
A1 - Freeman,Colin
A1 - Trudgill,Nigel
A1 - Tucker,Art T.
A1 - Pirinen,Matti
A1 - Peppelenbosch,Maikel P.
A1 - Van Der Laan,Luc J.W.
A1 - Kuipers,Ernst J.
A1 - Drenth,Joost P.H.
A1 - Peters,Wilbert H.
A1 - Reynolds,John V.
A1 - Kelleher,Dermot P.
A1 - McManus,Ross
A1 - Grabsch,Heike
A1 - Prenen,Hans
A1 - Bisschops,Raf
A1 - Krishnadath,Kausila
A1 - Siersema,Peter D.
A1 - Van Baal,Jantine W.P.M.
A1 - Middleton,Mark
A1 - Petty,Russell
A1 - Gillies,Richard
A1 - Burch,Nicola
A1 - Bhandari,Pradeep
A1 - Paterson,Stuart
A1 - Edwards,Cathryn
A1 - Penman,Ian
A1 - Vaidya,Kishor
A1 - Ang,Yeng
A1 - Murray,Iain
A1 - Patel,Praful
A1 - Ye,Weimin
A1 - Mullins,Paul
A1 - Wu,Anna H.
A1 - Bird,Nigel C.
A1 - Dallal,Helen
A1 - Shaheen,Nicholas J.
A1 - Murray,Liam J.
A1 - Koss,Konrad
A1 - Bernstein,Leslie
A1 - Romero,Yvonne
A1 - Hardie,Laura J.
A1 - Zhang,Rui
A1 - Winter,Helen
A1 - Corley,Douglas .A.
A1 - Panter,Simon
A1 - Risch,Harvey A.
A1 - Reid,Brian J.
A1 - Sargeant,Ian
A1 - Gammon,Marilie D.
A1 - Smart,Howard
A1 - Dhar,Anjan
A1 - McMurtry,Hugh
A1 - Ali,Haythem
A1 - Liu,Geoffrey
A1 - Casson,Allan G.
A1 - Chow,Wong-Ho
A1 - Rutter,Matt
A1 - Tawil,Ashref
A1 - Morris,Danielle
A1 - Nwokolo,Chuka
A1 - Isaacs,Peter
A1 - Rodgers,Colin
A1 - Ragunath,Krish
A1 - MacDonald,Chris
A1 - Haigh,Chris
A1 - Monk,David
A1 - Davies,Gareth
A1 - Wajed,Saj
A1 - Johnston,David
A1 - Gibbons,Michael
A1 - Cullen,Sue
A1 - Church,Nicholas
A1 - Langley,Ruth
A1 - Griffin,Michael
A1 - Alderson,Derek
A1 - Deloukas,Panos
A1 - Hunt,Sarah E.
A1 - Gray,Emma
A1 - Dronov,Serge
A1 - Potter,Simon C.
A1 - Tashakkori-Ghanbaria,Avazeh
A1 - Anderson,Mark
A1 - Brooks,Claire
A1 - Blackwell,Jenefer M.
A1 - Bramon,Elvira
A1 - Brown,Mathew A.
A1 - Casas,Juan P.
A1 - Corvin,Aiden
A1 - Duncanson,Audrey
A1 - Markus,Hugh S.
A1 - Mathew,Christopher G.
A1 - Palmer,Colin N.A.
A1 - Plomin,Robert
A1 - Rautanen,Anna
A1 - Sawcer,Stephen J.
A1 - Trembath,Richard C.
A1 - Viswanathan,Ananth C.
A1 - Wood,Nicholas
A1 - Trynka,Gosia
A1 - Wijmenga,Cisca
A1 - Cazier,Jean-Baptiste
A1 - Atherfold,Paul
A1 - Nicholson,Anna M.
A1 - Gellatly,Nichola L.
A1 - Glancy,Deborah
A1 - Cooper,Sheldon C.
A1 - Cunningham,David
A1 - Lind,Tore
A1 - Hapeshi,Julie
A1 - Ferry,David
A1 - Rathbone,Barrie
A1 - Brown,Julia
A1 - Love,Sharon
A1 - Attwood,Stephen
A1 - MacGregor,Stuart
A1 - Watson,Peter
A1 - Sanders,Scott
A1 - Ek,Weronica
A1 - Harrison,Rebecca F.
A1 - Moayyedi,Paul
A1 - De Caestecker,John
A1 - Barr,Hugh
A1 - Stupka,Elia
A1 - Vaughan,Thomas L.
A1 - Peltonen,Leena
A1 - Spencer,Chris C.A.
A1 - Tomlinson,Ian
A1 - Donnelly,Peter
A1 - Jankowski,Janus A.Z.
AU - Su,Zhan
AU - Gay,Laura J.
AU - Strange,Amy
AU - Palles,Claire
AU - Band,Gavin
AU - Whiteman,David C.
AU - Lescai,Francesco
AU - Langford,Cordelia
AU - Nanji,Manoj
AU - Edkins,Sarah
AU - Van Der Winkel,Anouk
AU - Levine,David
AU - Sasieni,Peter
AU - Bellenguez,Celine
AU - Howarth,Kimberley
AU - Freeman,Colin
AU - Trudgill,Nigel
AU - Tucker,Art T.
AU - Pirinen,Matti
AU - Peppelenbosch,Maikel P.
AU - Van Der Laan,Luc J.W.
AU - Kuipers,Ernst J.
AU - Drenth,Joost P.H.
AU - Peters,Wilbert H.
AU - Reynolds,John V.
AU - Kelleher,Dermot P.
AU - McManus,Ross
AU - Grabsch,Heike
AU - Prenen,Hans
AU - Bisschops,Raf
AU - Krishnadath,Kausila
AU - Siersema,Peter D.
AU - Van Baal,Jantine W.P.M.
AU - Middleton,Mark
AU - Petty,Russell
AU - Gillies,Richard
AU - Burch,Nicola
AU - Bhandari,Pradeep
AU - Paterson,Stuart
AU - Edwards,Cathryn
AU - Penman,Ian
AU - Vaidya,Kishor
AU - Ang,Yeng
AU - Murray,Iain
AU - Patel,Praful
AU - Ye,Weimin
AU - Mullins,Paul
AU - Wu,Anna H.
AU - Bird,Nigel C.
AU - Dallal,Helen
AU - Shaheen,Nicholas J.
AU - Murray,Liam J.
AU - Koss,Konrad
AU - Bernstein,Leslie
AU - Romero,Yvonne
AU - Hardie,Laura J.
AU - Zhang,Rui
AU - Winter,Helen
AU - Corley,Douglas .A.
AU - Panter,Simon
AU - Risch,Harvey A.
AU - Reid,Brian J.
AU - Sargeant,Ian
AU - Gammon,Marilie D.
AU - Smart,Howard
AU - Dhar,Anjan
AU - McMurtry,Hugh
AU - Ali,Haythem
AU - Liu,Geoffrey
AU - Casson,Allan G.
AU - Chow,Wong-Ho
AU - Rutter,Matt
AU - Tawil,Ashref
AU - Morris,Danielle
AU - Nwokolo,Chuka
AU - Isaacs,Peter
AU - Rodgers,Colin
AU - Ragunath,Krish
AU - MacDonald,Chris
AU - Haigh,Chris
AU - Monk,David
AU - Davies,Gareth
AU - Wajed,Saj
AU - Johnston,David
AU - Gibbons,Michael
AU - Cullen,Sue
AU - Church,Nicholas
AU - Langley,Ruth
AU - Griffin,Michael
AU - Alderson,Derek
AU - Deloukas,Panos
AU - Hunt,Sarah E.
AU - Gray,Emma
AU - Dronov,Serge
AU - Potter,Simon C.
AU - Tashakkori-Ghanbaria,Avazeh
AU - Anderson,Mark
AU - Brooks,Claire
AU - Blackwell,Jenefer M.
AU - Bramon,Elvira
AU - Brown,Mathew A.
AU - Casas,Juan P.
AU - Corvin,Aiden
AU - Duncanson,Audrey
AU - Markus,Hugh S.
AU - Mathew,Christopher G.
AU - Palmer,Colin N.A.
AU - Plomin,Robert
AU - Rautanen,Anna
AU - Sawcer,Stephen J.
AU - Trembath,Richard C.
AU - Viswanathan,Ananth C.
AU - Wood,Nicholas
AU - Trynka,Gosia
AU - Wijmenga,Cisca
AU - Cazier,Jean-Baptiste
AU - Atherfold,Paul
AU - Nicholson,Anna M.
AU - Gellatly,Nichola L.
AU - Glancy,Deborah
AU - Cooper,Sheldon C.
AU - Cunningham,David
AU - Lind,Tore
AU - Hapeshi,Julie
AU - Ferry,David
AU - Rathbone,Barrie
AU - Brown,Julia
AU - Love,Sharon
AU - Attwood,Stephen
AU - MacGregor,Stuart
AU - Watson,Peter
AU - Sanders,Scott
AU - Ek,Weronica
AU - Harrison,Rebecca F.
AU - Moayyedi,Paul
AU - De Caestecker,John
AU - Barr,Hugh
AU - Stupka,Elia
AU - Vaughan,Thomas L.
AU - Peltonen,Leena
AU - Spencer,Chris C.A.
AU - Tomlinson,Ian
AU - Donnelly,Peter
AU - Jankowski,Janus A.Z.
PY - 2012
Y1 - 2012
N2 - Barrett's esophagus is an increasingly common disease that is strongly associated with reflux of stomach acid and usually a hiatus hernia, and it strongly predisposes to esophageal adenocarcinoma (EAC), a tumor with a very poor prognosis. We report the first genome-wide association study on Barrett's esophagus, comprising 1,852 UK cases and 5,172 UK controls in the discovery stage and 5,986 cases and 12,825 controls in the replication stage. Variants at two loci were associated with disease risk: chromosome 6p21, rs9257809 (P combined = 4.09 × 10 ; odds ratio (OR) = 1.21, 95% confidence interval (CI) =1.13-1.28), within the major histocompatibility complex locus, and chromosome 16q24, rs9936833 (P combined = 2.74 × 10 ; OR = 1.14, 95% CI = 1.10-1.19), for which the closest protein-coding gene is FOXF1, which is implicated in esophageal development and structure. We found evidence that many common variants of small effect contribute to genetic susceptibility to Barrett's esophagus and that SNP alleles predisposing to obesity also increase risk for Barrett's esophagus. © 2012 Nature America, Inc. All rights reserved.
AB - Barrett's esophagus is an increasingly common disease that is strongly associated with reflux of stomach acid and usually a hiatus hernia, and it strongly predisposes to esophageal adenocarcinoma (EAC), a tumor with a very poor prognosis. We report the first genome-wide association study on Barrett's esophagus, comprising 1,852 UK cases and 5,172 UK controls in the discovery stage and 5,986 cases and 12,825 controls in the replication stage. Variants at two loci were associated with disease risk: chromosome 6p21, rs9257809 (P combined = 4.09 × 10 ; odds ratio (OR) = 1.21, 95% confidence interval (CI) =1.13-1.28), within the major histocompatibility complex locus, and chromosome 16q24, rs9936833 (P combined = 2.74 × 10 ; OR = 1.14, 95% CI = 1.10-1.19), for which the closest protein-coding gene is FOXF1, which is implicated in esophageal development and structure. We found evidence that many common variants of small effect contribute to genetic susceptibility to Barrett's esophagus and that SNP alleles predisposing to obesity also increase risk for Barrett's esophagus. © 2012 Nature America, Inc. All rights reserved.
U2 - 10.1038/ng.2408
DO - 10.1038/ng.2408
M1 - Article
JO - Nature Genetics
JF - Nature Genetics
SN - 1061-4036
IS - 10
VL - 44
SP - 1131
EP - 1136
ER -