Genome-wide association study identifies a variant in HDAC9 associated with large vessel ischemic stroke. / Bellenguez, Celine; Bevan, Steve; Gschwendtner, Andreas; Spencer, Chris C. A.; Burgess, Annette I.; Pirinen, Matti; Jackson, Caroline A.; Traylor, Matthew; Strange, Amy; Su, Zhan; Band, Gavin; Syme, Paul D.; Malik, Rainer; Pera, Joanna; Norrving, Bo; Lemmens, Robin; Freeman, Colin; Schanz, Renata; James, Tom; Poole, Deborah; Murphy, Lee; Segal, Helen; Cortellini, Lynelle; Cheng, Yu-Ching; Woo, Daniel; Nalls, Michael A.; Mueller-Myhsok, Bertram; Meisinger, Christa; Seedorf, Udo; Ross-Adams, Helen; Boonen, Steven; Wloch-Kopec, Dorota; Valant, Valerie; Slark, Julia; Furie, Karen; Delavaran, Hossein; Langford, Cordelia; Deloukas, Panos; Edkins, Sarah; Hunt, Sarah; Gray, Emma; Dronov, Serge; Peltonen, Leena; Gretarsdottir, Solveig; Thorleifsson, Gudmar; Thorsteinsdottir, Unnur; Stefansson, Kari; Boncoraglio, Giorgio B.; Parati, Eugenio A.; Attia, John; Holliday, Elizabeth; Levi, Chris; Franzosi, Maria-Grazia; Goel, Anuj; Helgadottir, Anna; Blackwell, Jenefer M.; Bramon, Elvira; Brown, Matthew A.; Casas, Juan P.; Corvin, Aiden; Duncanson, Audrey; Jankowski, Janusz; Mathew, Christopher G.; Palmer, Colin N. A.; Plomin, Robert; Rautanen, Anna; Sawcer, Stephen J.; Trembath, Richard C.; Viswanathan, Ananth C.; Wood, Nicholas W.; Worrall, Bradford B.; Kittner, Steven J.; Mitchell, Braxton D.; Kissela, Brett; Meschia, James F.; Thijs, Vincent; Lindgren, Arne; Macleod, Mary Joan; Slowik, Agnieszka; Walters, Matthew; Rosand, Jonathan; Sharma, Pankaj; Farrall, Martin; Sudlow, Cathie L. M.; Rothwell, Peter M.; Dichgans, Martin; Donnelly, Peter; Markus, Hugh S.; WTCCC2, ISGC.
In: Nature Genetics, Vol. 44, No. 3, 03.2012, p. 328-U141.Research output: Contribution to journal › Article
}
TY - JOUR
T1 - Genome-wide association study identifies a variant in HDAC9 associated with large vessel ischemic stroke
A1 - Bellenguez,Celine
A1 - Bevan,Steve
A1 - Gschwendtner,Andreas
A1 - Spencer,Chris C. A.
A1 - Burgess,Annette I.
A1 - Pirinen,Matti
A1 - Jackson,Caroline A.
A1 - Traylor,Matthew
A1 - Strange,Amy
A1 - Su,Zhan
A1 - Band,Gavin
A1 - Syme,Paul D.
A1 - Malik,Rainer
A1 - Pera,Joanna
A1 - Norrving,Bo
A1 - Lemmens,Robin
A1 - Freeman,Colin
A1 - Schanz,Renata
A1 - James,Tom
A1 - Poole,Deborah
A1 - Murphy,Lee
A1 - Segal,Helen
A1 - Cortellini,Lynelle
A1 - Cheng,Yu-Ching
A1 - Woo,Daniel
A1 - Nalls,Michael A.
A1 - Mueller-Myhsok,Bertram
A1 - Meisinger,Christa
A1 - Seedorf,Udo
A1 - Ross-Adams,Helen
A1 - Boonen,Steven
A1 - Wloch-Kopec,Dorota
A1 - Valant,Valerie
A1 - Slark,Julia
A1 - Furie,Karen
A1 - Delavaran,Hossein
A1 - Langford,Cordelia
A1 - Deloukas,Panos
A1 - Edkins,Sarah
A1 - Hunt,Sarah
A1 - Gray,Emma
A1 - Dronov,Serge
A1 - Peltonen,Leena
A1 - Gretarsdottir,Solveig
A1 - Thorleifsson,Gudmar
A1 - Thorsteinsdottir,Unnur
A1 - Stefansson,Kari
A1 - Boncoraglio,Giorgio B.
A1 - Parati,Eugenio A.
A1 - Attia,John
A1 - Holliday,Elizabeth
A1 - Levi,Chris
A1 - Franzosi,Maria-Grazia
A1 - Goel,Anuj
A1 - Helgadottir,Anna
A1 - Blackwell,Jenefer M.
A1 - Bramon,Elvira
A1 - Brown,Matthew A.
A1 - Casas,Juan P.
A1 - Corvin,Aiden
A1 - Duncanson,Audrey
A1 - Jankowski,Janusz
A1 - Mathew,Christopher G.
A1 - Palmer,Colin N. A.
A1 - Plomin,Robert
A1 - Rautanen,Anna
A1 - Sawcer,Stephen J.
A1 - Trembath,Richard C.
A1 - Viswanathan,Ananth C.
A1 - Wood,Nicholas W.
A1 - Worrall,Bradford B.
A1 - Kittner,Steven J.
A1 - Mitchell,Braxton D.
A1 - Kissela,Brett
A1 - Meschia,James F.
A1 - Thijs,Vincent
A1 - Lindgren,Arne
A1 - Macleod,Mary Joan
A1 - Slowik,Agnieszka
A1 - Walters,Matthew
A1 - Rosand,Jonathan
A1 - Sharma,Pankaj
A1 - Farrall,Martin
A1 - Sudlow,Cathie L. M.
A1 - Rothwell,Peter M.
A1 - Dichgans,Martin
A1 - Donnelly,Peter
A1 - Markus,Hugh S.
A1 - WTCCC2, ISGC
AU - Bellenguez,Celine
AU - Bevan,Steve
AU - Gschwendtner,Andreas
AU - Spencer,Chris C. A.
AU - Burgess,Annette I.
AU - Pirinen,Matti
AU - Jackson,Caroline A.
AU - Traylor,Matthew
AU - Strange,Amy
AU - Su,Zhan
AU - Band,Gavin
AU - Syme,Paul D.
AU - Malik,Rainer
AU - Pera,Joanna
AU - Norrving,Bo
AU - Lemmens,Robin
AU - Freeman,Colin
AU - Schanz,Renata
AU - James,Tom
AU - Poole,Deborah
AU - Murphy,Lee
AU - Segal,Helen
AU - Cortellini,Lynelle
AU - Cheng,Yu-Ching
AU - Woo,Daniel
AU - Nalls,Michael A.
AU - Mueller-Myhsok,Bertram
AU - Meisinger,Christa
AU - Seedorf,Udo
AU - Ross-Adams,Helen
AU - Boonen,Steven
AU - Wloch-Kopec,Dorota
AU - Valant,Valerie
AU - Slark,Julia
AU - Furie,Karen
AU - Delavaran,Hossein
AU - Langford,Cordelia
AU - Deloukas,Panos
AU - Edkins,Sarah
AU - Hunt,Sarah
AU - Gray,Emma
AU - Dronov,Serge
AU - Peltonen,Leena
AU - Gretarsdottir,Solveig
AU - Thorleifsson,Gudmar
AU - Thorsteinsdottir,Unnur
AU - Stefansson,Kari
AU - Boncoraglio,Giorgio B.
AU - Parati,Eugenio A.
AU - Attia,John
AU - Holliday,Elizabeth
AU - Levi,Chris
AU - Franzosi,Maria-Grazia
AU - Goel,Anuj
AU - Helgadottir,Anna
AU - Blackwell,Jenefer M.
AU - Bramon,Elvira
AU - Brown,Matthew A.
AU - Casas,Juan P.
AU - Corvin,Aiden
AU - Duncanson,Audrey
AU - Jankowski,Janusz
AU - Mathew,Christopher G.
AU - Palmer,Colin N. A.
AU - Plomin,Robert
AU - Rautanen,Anna
AU - Sawcer,Stephen J.
AU - Trembath,Richard C.
AU - Viswanathan,Ananth C.
AU - Wood,Nicholas W.
AU - Worrall,Bradford B.
AU - Kittner,Steven J.
AU - Mitchell,Braxton D.
AU - Kissela,Brett
AU - Meschia,James F.
AU - Thijs,Vincent
AU - Lindgren,Arne
AU - Macleod,Mary Joan
AU - Slowik,Agnieszka
AU - Walters,Matthew
AU - Rosand,Jonathan
AU - Sharma,Pankaj
AU - Farrall,Martin
AU - Sudlow,Cathie L. M.
AU - Rothwell,Peter M.
AU - Dichgans,Martin
AU - Donnelly,Peter
AU - Markus,Hugh S.
AU - WTCCC2, ISGC
PY - 2012/3
Y1 - 2012/3
N2 - <p>Genetic factors have been implicated in stroke risk, but few replicated associations have been reported. We conducted a genome-wide association study (GWAS) for ischemic stroke and its subtypes in 3,548 affected individuals and 5,972 controls, all of European ancestry. Replication of potential signals was performed in 5,859 affected individuals and 6,281 controls. We replicated previous associations for cardioembolic stroke near PITX2 and ZFHX3 and for large vessel stroke at a 9p21 locus. We identified a new association for large vessel stroke within HDAC9 (encoding histone deacetylase 9) on chromosome 7p21.1 (including further replication in an additional 735 affected individuals and 28,583 controls) (rs11984041; combined P = 1.87 x 10(-11); odds ratio (OR) = 1.42, 95% confidence interval (CI) = 1.28-1.57). All four loci exhibited evidence for heterogeneity of effect across the stroke subtypes, with some and possibly all affecting risk for only one subtype. This suggests distinct genetic architectures for different stroke subtypes.</p>
AB - <p>Genetic factors have been implicated in stroke risk, but few replicated associations have been reported. We conducted a genome-wide association study (GWAS) for ischemic stroke and its subtypes in 3,548 affected individuals and 5,972 controls, all of European ancestry. Replication of potential signals was performed in 5,859 affected individuals and 6,281 controls. We replicated previous associations for cardioembolic stroke near PITX2 and ZFHX3 and for large vessel stroke at a 9p21 locus. We identified a new association for large vessel stroke within HDAC9 (encoding histone deacetylase 9) on chromosome 7p21.1 (including further replication in an additional 735 affected individuals and 28,583 controls) (rs11984041; combined P = 1.87 x 10(-11); odds ratio (OR) = 1.42, 95% confidence interval (CI) = 1.28-1.57). All four loci exhibited evidence for heterogeneity of effect across the stroke subtypes, with some and possibly all affecting risk for only one subtype. This suggests distinct genetic architectures for different stroke subtypes.</p>
U2 - 10.1038/ng.1081
DO - 10.1038/ng.1081
M1 - Article
JO - Nature Genetics
JF - Nature Genetics
SN - 1061-4036
IS - 3
VL - 44
SP - 328-U141
ER -