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The tomato genome sequence provides insights into fleshy fruit evolution

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The tomato genome sequence provides insights into fleshy fruit evolution. / Sato, Shusei; Tabata, Satoshi; Hirakawa, Hideki; Asamizu, Erika; Shirasawa, Kenta; Isobe, Sachiko; Kaneko, Takakazu; Nakamura, Yasukazu; Shibata, Daisuke; Aoki, Koh; Egholm, Michael; Knight, James; Bogden, Robert; Li, Changbao; Shuang, Yang; Xu, Xun; Pan, Shengkai; Cheng, Shifeng; Liu, Xin; Ren, Yuanyuan; Wang, Jun; Albiero, Alessandro; Dal Pero, Francesca; Todesco, Sara; Van Eck, Joyce; Buels, Robert M.; Bombarely, Aureliano; Gosselin, Joseph R.; Huang, Minyun; Leto, Jonathan A.; Menda, Naama; Strickler, Susan; Mao, Linyong; Gao, Shan; Tecle, Isaak Y.; York, Thomas; Zheng, Yi; Vrebalov, Julia T.; Lee, JeMin; Zhong, Silin; Mueller, Lukas A.; Stiekema, Willem J.; Ribeca, Paolo; Alioto, Tyler; Yang, Wencai; Huang, Sanwen; Du, Yongchen; Zhang, Zhonghua; Gao, Jianchang; Guo, Yanmei; Wang, Xiaoxuan; Li, Ying; He, Jun; Li, Chuanyou; Cheng, Zhukuan; Zuo, Jianru; Ren, Jianfeng; Zhao, Jiuhai; Yan, Liuhua; Jiang, Hongling; Wang, Bao; Li, Hongshuang; Li, Zhenjun; Fu, Fuyou; Chen, Bingtang; Han, Bin; Feng, Qi; Fan, Danlin; Wang, Ying; Ling, Hongqing; Xue, Yongbiao; Ware, Doreen; McCombie, W. Richard; Lippman, Zachary B.; Chia, Jer-Ming; Jiang, Ke; Pasternak, Shiran; Gelley, Laura; Kramer, Melissa; Anderson, Lorinda K.; Chang, Song-Bin; Royer, Suzanne M.; Shearer, Lindsay A.; Stack, Stephen M.; Rose, Jocelyn K. C.; Xu, Yimin; Eannetta, Nancy; Matas, Antonio J.; McQuinn, Ryan; Tanksley, Steven D.; Camara, Francisco; Guigo, Roderic; Rombauts, Stephane; Fawcett, Jeffrey; Van de Peer, Yves; Zamir, Dani; Liang, Chunbo; Spannagl, Manuel; Gundlach, Heidrun; Bruggmann, Remy; Mayer, Klaus; Jia, Zhiqi; Zhang, Junhong; Ye, Zhibiao; Bishop, Gerard J.; Butcher, Sarah; Lopez-Cobollo, Rosa; Buchan, Daniel; Filippis, Ioannis; Abbott, James; Dixit, Rekha; Singh, Manju; Singh, Archana; Pal, Jitendra Kumar; Pandit, Awadhesh; Singh, Pradeep Kumar; Mahato, Ajay Kumar; Dogra, Vivek; Gaikwad, Kishor; Sharma, Tilak Raj; Mohapatra, Trilochan; Singh, Nagendra Kumar; Causse, Mathilde; Rothan, Christophe; Schiex, Thomas; Noirot, Celine; Bellec, Arnaud; Klopp, Christophe; Delalande, Corinne; Berges, Helene; Mariette, Jerome; Frasse, Pierre; Vautrin, Sonia; Zouine, Mohamed; Latche, Alain; Rousseau, Christine; Regad, Farid; Pech, Jean-Claude; Philippot, Murielle; Bouzayen, Mondher; Pericard, Pierre; Osorio, Sonia; Fernandez del Carmen, Asuncion; Monforte, Antonio; Granell, Antonio; Fernandez-Munoz, Rafael; Conte, Mariana; Lichtenstein, Gabriel; Carrari, Fernando; De Bellis, Gianluca; Fuligni, Fabio; Peano, Clelia; Grandillo, Silvana; Termolino, Pasquale; Pietrella, Marco; Fantini, Elio; Falcone, Giulia; Fiore, Alessia; Giuliano, Giovanni; Lopez, Loredana; Facella, Paolo; Perrotta, Gaetano; Daddiego, Loretta; Bryan, Glenn; Orozco, Modesto; Pastor, Xavier; Torrents, David; van Schriek, Keygene N. V. Marco G. M.; Feron, Richard M. C.; van Oeveren, Jan; de Heer, Peter; daPonte, Lorena; Jacobs-Oomen, Saskia; Cariaso, Mike; Prins, Marcel; van Eijk, Michiel J. T.; Janssen, Antoine; van Haaren, Mark J. J.; Jo, Sung-Hwan; Kim, Jungeun; Kwon, Suk-Yoon; Kim, Sangmi; Koo, Dal-Hoe; Lee, Sanghyeob; Hur, Cheol-Goo; Clouser, Christopher; Rico, Alain; Hallab, Asis; Gebhardt, Christiane; Klee, Kathrin; Jöcker, Anika; Warfsmann, Jens; Goebel, Ulrike; Kawamura, Shingo; Yano, Kentaro; Sherman, Jamie D.; Fukuoka, Hiroyuki; Negoro, Satomi; Bhutty, Sarita; Chowdhury, Parul; Chattopadhyay, Debasis; Datema, Erwin; Smit, Sandra; Schijlen, Eliog. W. M.; van de Belt, Jose; van Haarst, Jan C.; Peters, Sander A.; van Staveren, Marjo J.; Henkens, Marleen H. C.; Mooyman, Paul J. W.; Hesselink, Thamara; van Ham, Roeland C. H. J.; Jiang, Guoyong; Droege, Marcus; Choi, Doil; Kang, Byung-Cheol; Kim, Byung Dong; Park, Minkyu; Kim, Seungill; Yeom, Seon-In; Lee, Yong-Hwan; Choi, Yang-Do; Li, Guangcun; Gao, Jianwei; Liu, Yongsheng; Huang, Shengxiong; Fernandez-Pedrosa, Victoria; Collado, Carmen; Zuniga, Sheila; Wang, Guoping; Cade, Rebecca; Dietrich, Robert A.; Rogers, Jane; Knapp, Sandra; Fei, Zhangjun; White, Ruth A.; Thannhauser, Theodore W.; Giovannoni, James J.; Angel Botella, Miguel; Gilbert, Louise; Gonzalez, Ramon; Goicoechea, Jose Luis; Yu, Yeisoo; Kudrna, David; Collura, Kristi; Wissotski, Marina; Wing, Rod; Schoof, Heiko; Meyers, Blake C.; Gurazada, Aishwarya Bala; Green, Pamela J.; Mathur, Saloni; Vyas, Shailendra; Solanke, Amolkumar U.; Kumar, Rahul; Gupta, Vikrant; Sharma, Arun K.; Khurana, Paramjit; Khurana, Jitendra P.; Tyagi, Akhilesh K.; Dalmay, Tamas; Mohorianu, Irina; Walts, Brandon; Chamala, Srikar; Barbazuk, W. Brad; Li, Jingping; Guo, Hui; Lee, Tae-Ho; Wang, Yupeng; Zhang, Dong; Paterson, Andrew H.; Wang, Xiyin; Tang, Haibao; Barone, Amalia; Chiusano, Maria Luisa; Ercolano, Maria Raffaella; D'Agostino, Nunzio; Di Filippo, Miriam; Traini, Alessandra; Sanseverino, Walter; Frusciante, Luigi; Seymour, Graham B.; Elharam, Mounir; Fu, Ying; Hua, Axin; Kenton, Steven; Lewis, Jennifer; Lin, Shaoping; Najar, Fares; Lai, Hongshing; Qin, Baifang; Qu, Chunmei; Shi, Ruihua; White, Douglas; White, James; Xing, Yanbo; Yang, Keqin; Yi, Jing; Yao, Ziyun; Zhou, Liping; Roe, Bruce A.; Vezzi, Alessandro; D'Angelo, Michela; Zimbello, Rosanna; Schiavon, Riccardo; Caniato, Elisa; Rigobello, Chiara; Campagna, Davide; Vitulo, Nicola; Valle, Giorgio; Nelson, David R.; De Paoli, Emanuele; Szinay, Dora; de Jong, Hans H.; Bai, Yuling; Visser, Richard G. F.; Lankhorst, Rene M. Klein; Beasley, Helen; McLaren, Karen; Nicholson, Christine; Riddle, Claire; Gianese, Giulio; Tomato Genome Consortium.

In: Nature, Vol. 485, No. 7400, 31.05.2012, p. 635-641.

Research output: Contribution to journalArticle

Harvard

Sato, S, Tabata, S, Hirakawa, H, Asamizu, E, Shirasawa, K, Isobe, S, Kaneko, T, Nakamura, Y, Shibata, D, Aoki, K, Egholm, M, Knight, J, Bogden, R, Li, C, Shuang, Y, Xu, X, Pan, S, Cheng, S, Liu, X, Ren, Y, Wang, J, Albiero, A, Dal Pero, F, Todesco, S, Van Eck, J, Buels, RM, Bombarely, A, Gosselin, JR, Huang, M, Leto, JA, Menda, N, Strickler, S, Mao, L, Gao, S, Tecle, IY, York, T, Zheng, Y, Vrebalov, JT, Lee, J, Zhong, S, Mueller, LA, Stiekema, WJ, Ribeca, P, Alioto, T, Yang, W, Huang, S, Du, Y, Zhang, Z, Gao, J, Guo, Y, Wang, X, Li, Y, He, J, Li, C, Cheng, Z, Zuo, J, Ren, J, Zhao, J, Yan, L, Jiang, H, Wang, B, Li, H, Li, Z, Fu, F, Chen, B, Han, B, Feng, Q, Fan, D, Wang, Y, Ling, H, Xue, Y, Ware, D, McCombie, WR, Lippman, ZB, Chia, J-M, Jiang, K, Pasternak, S, Gelley, L, Kramer, M, Anderson, LK, Chang, S-B, Royer, SM, Shearer, LA, Stack, SM, Rose, JKC, Xu, Y, Eannetta, N, Matas, AJ, McQuinn, R, Tanksley, SD, Camara, F, Guigo, R, Rombauts, S, Fawcett, J, Van de Peer, Y, Zamir, D, Liang, C, Spannagl, M, Gundlach, H, Bruggmann, R, Mayer, K, Jia, Z, Zhang, J, Ye, Z, Bishop, GJ, Butcher, S, Lopez-Cobollo, R, Buchan, D, Filippis, I, Abbott, J, Dixit, R, Singh, M, Singh, A, Pal, JK, Pandit, A, Singh, PK, Mahato, AK, Dogra, V, Gaikwad, K, Sharma, TR, Mohapatra, T, Singh, NK, Causse, M, Rothan, C, Schiex, T, Noirot, C, Bellec, A, Klopp, C, Delalande, C, Berges, H, Mariette, J, Frasse, P, Vautrin, S, Zouine, M, Latche, A, Rousseau, C, Regad, F, Pech, J-C, Philippot, M, Bouzayen, M, Pericard, P, Osorio, S, Fernandez del Carmen, A, Monforte, A, Granell, A, Fernandez-Munoz, R, Conte, M, Lichtenstein, G, Carrari, F, De Bellis, G, Fuligni, F, Peano, C, Grandillo, S, Termolino, P, Pietrella, M, Fantini, E, Falcone, G, Fiore, A, Giuliano, G, Lopez, L, Facella, P, Perrotta, G, Daddiego, L, Bryan, G, Orozco, M, Pastor, X, Torrents, D, van Schriek, KNVMGM, Feron, RMC, van Oeveren, J, de Heer, P, daPonte, L, Jacobs-Oomen, S, Cariaso, M, Prins, M, van Eijk, MJT, Janssen, A, van Haaren, MJJ, Jo, S-H, Kim, J, Kwon, S-Y, Kim, S, Koo, D-H, Lee, S, Hur, C-G, Clouser, C, Rico, A, Hallab, A, Gebhardt, C, Klee, K, Jöcker, A, Warfsmann, J, Goebel, U, Kawamura, S, Yano, K, Sherman, JD, Fukuoka, H, Negoro, S, Bhutty, S, Chowdhury, P, Chattopadhyay, D, Datema, E, Smit, S, Schijlen, EWM, van de Belt, J, van Haarst, JC, Peters, SA, van Staveren, MJ, Henkens, MHC, Mooyman, PJW, Hesselink, T, van Ham, RCHJ, Jiang, G, Droege, M, Choi, D, Kang, B-C, Kim, BD, Park, M, Kim, S, Yeom, S-I, Lee, Y-H, Choi, Y-D, Li, G, Gao, J, Liu, Y, Huang, S, Fernandez-Pedrosa, V, Collado, C, Zuniga, S, Wang, G, Cade, R, Dietrich, RA, Rogers, J, Knapp, S, Fei, Z, White, RA, Thannhauser, TW, Giovannoni, JJ, Angel Botella, M, Gilbert, L, Gonzalez, R, Goicoechea, JL, Yu, Y, Kudrna, D, Collura, K, Wissotski, M, Wing, R, Schoof, H, Meyers, BC, Gurazada, AB, Green, PJ, Mathur, S, Vyas, S, Solanke, AU, Kumar, R, Gupta, V, Sharma, AK, Khurana, P, Khurana, JP, Tyagi, AK, Dalmay, T, Mohorianu, I, Walts, B, Chamala, S, Barbazuk, WB, Li, J, Guo, H, Lee, T-H, Wang, Y, Zhang, D, Paterson, AH, Wang, X, Tang, H, Barone, A, Chiusano, ML, Ercolano, MR, D'Agostino, N, Di Filippo, M, Traini, A, Sanseverino, W, Frusciante, L, Seymour, GB, Elharam, M, Fu, Y, Hua, A, Kenton, S, Lewis, J, Lin, S, Najar, F, Lai, H, Qin, B, Qu, C, Shi, R, White, D, White, J, Xing, Y, Yang, K, Yi, J, Yao, Z, Zhou, L, Roe, BA, Vezzi, A, D'Angelo, M, Zimbello, R, Schiavon, R, Caniato, E, Rigobello, C, Campagna, D, Vitulo, N, Valle, G, Nelson, DR, De Paoli, E, Szinay, D, de Jong, HH, Bai, Y, Visser, RGF, Lankhorst, RMK, Beasley, H, McLaren, K, Nicholson, C, Riddle, C, Gianese, G & Tomato Genome Consortium 2012, 'The tomato genome sequence provides insights into fleshy fruit evolution' Nature, vol 485, no. 7400, pp. 635-641. DOI: 10.1038/nature11119

APA

Sato, S., Tabata, S., Hirakawa, H., Asamizu, E., Shirasawa, K., Isobe, S., ... Tomato Genome Consortium (2012). The tomato genome sequence provides insights into fleshy fruit evolution. Nature, 485(7400), 635-641. DOI: 10.1038/nature11119

Vancouver

Sato S, Tabata S, Hirakawa H, Asamizu E, Shirasawa K, Isobe S et al. The tomato genome sequence provides insights into fleshy fruit evolution. Nature. 2012 May 31;485(7400):635-641. Available from, DOI: 10.1038/nature11119

Author

Sato, Shusei; Tabata, Satoshi; Hirakawa, Hideki; Asamizu, Erika; Shirasawa, Kenta; Isobe, Sachiko; Kaneko, Takakazu; Nakamura, Yasukazu; Shibata, Daisuke; Aoki, Koh; Egholm, Michael; Knight, James; Bogden, Robert; Li, Changbao; Shuang, Yang; Xu, Xun; Pan, Shengkai; Cheng, Shifeng; Liu, Xin; Ren, Yuanyuan; Wang, Jun; Albiero, Alessandro; Dal Pero, Francesca; Todesco, Sara; Van Eck, Joyce; Buels, Robert M.; Bombarely, Aureliano; Gosselin, Joseph R.; Huang, Minyun; Leto, Jonathan A.; Menda, Naama; Strickler, Susan; Mao, Linyong; Gao, Shan; Tecle, Isaak Y.; York, Thomas; Zheng, Yi; Vrebalov, Julia T.; Lee, JeMin; Zhong, Silin; Mueller, Lukas A.; Stiekema, Willem J.; Ribeca, Paolo; Alioto, Tyler; Yang, Wencai; Huang, Sanwen; Du, Yongchen; Zhang, Zhonghua; Gao, Jianchang; Guo, Yanmei; Wang, Xiaoxuan; Li, Ying; He, Jun; Li, Chuanyou; Cheng, Zhukuan; Zuo, Jianru; Ren, Jianfeng; Zhao, Jiuhai; Yan, Liuhua; Jiang, Hongling; Wang, Bao; Li, Hongshuang; Li, Zhenjun; Fu, Fuyou; Chen, Bingtang; Han, Bin; Feng, Qi; Fan, Danlin; Wang, Ying; Ling, Hongqing; Xue, Yongbiao; Ware, Doreen; McCombie, W. Richard; Lippman, Zachary B.; Chia, Jer-Ming; Jiang, Ke; Pasternak, Shiran; Gelley, Laura; Kramer, Melissa; Anderson, Lorinda K.; Chang, Song-Bin; Royer, Suzanne M.; Shearer, Lindsay A.; Stack, Stephen M.; Rose, Jocelyn K. C.; Xu, Yimin; Eannetta, Nancy; Matas, Antonio J.; McQuinn, Ryan; Tanksley, Steven D.; Camara, Francisco; Guigo, Roderic; Rombauts, Stephane; Fawcett, Jeffrey; Van de Peer, Yves; Zamir, Dani; Liang, Chunbo; Spannagl, Manuel; Gundlach, Heidrun; Bruggmann, Remy; Mayer, Klaus; Jia, Zhiqi; Zhang, Junhong; Ye, Zhibiao; Bishop, Gerard J.; Butcher, Sarah; Lopez-Cobollo, Rosa; Buchan, Daniel; Filippis, Ioannis; Abbott, James; Dixit, Rekha; Singh, Manju; Singh, Archana; Pal, Jitendra Kumar; Pandit, Awadhesh; Singh, Pradeep Kumar; Mahato, Ajay Kumar; Dogra, Vivek; Gaikwad, Kishor; Sharma, Tilak Raj; Mohapatra, Trilochan; Singh, Nagendra Kumar; Causse, Mathilde; Rothan, Christophe; Schiex, Thomas; Noirot, Celine; Bellec, Arnaud; Klopp, Christophe; Delalande, Corinne; Berges, Helene; Mariette, Jerome; Frasse, Pierre; Vautrin, Sonia; Zouine, Mohamed; Latche, Alain; Rousseau, Christine; Regad, Farid; Pech, Jean-Claude; Philippot, Murielle; Bouzayen, Mondher; Pericard, Pierre; Osorio, Sonia; Fernandez del Carmen, Asuncion; Monforte, Antonio; Granell, Antonio; Fernandez-Munoz, Rafael; Conte, Mariana; Lichtenstein, Gabriel; Carrari, Fernando; De Bellis, Gianluca; Fuligni, Fabio; Peano, Clelia; Grandillo, Silvana; Termolino, Pasquale; Pietrella, Marco; Fantini, Elio; Falcone, Giulia; Fiore, Alessia; Giuliano, Giovanni; Lopez, Loredana; Facella, Paolo; Perrotta, Gaetano; Daddiego, Loretta; Bryan, Glenn; Orozco, Modesto; Pastor, Xavier; Torrents, David; van Schriek, Keygene N. V. Marco G. M.; Feron, Richard M. C.; van Oeveren, Jan; de Heer, Peter; daPonte, Lorena; Jacobs-Oomen, Saskia; Cariaso, Mike; Prins, Marcel; van Eijk, Michiel J. T.; Janssen, Antoine; van Haaren, Mark J. J.; Jo, Sung-Hwan; Kim, Jungeun; Kwon, Suk-Yoon; Kim, Sangmi; Koo, Dal-Hoe; Lee, Sanghyeob; Hur, Cheol-Goo; Clouser, Christopher; Rico, Alain; Hallab, Asis; Gebhardt, Christiane; Klee, Kathrin; Jöcker, Anika; Warfsmann, Jens; Goebel, Ulrike; Kawamura, Shingo; Yano, Kentaro; Sherman, Jamie D.; Fukuoka, Hiroyuki; Negoro, Satomi; Bhutty, Sarita; Chowdhury, Parul; Chattopadhyay, Debasis; Datema, Erwin; Smit, Sandra; Schijlen, Eliog. W. M.; van de Belt, Jose; van Haarst, Jan C.; Peters, Sander A.; van Staveren, Marjo J.; Henkens, Marleen H. C.; Mooyman, Paul J. W.; Hesselink, Thamara; van Ham, Roeland C. H. J.; Jiang, Guoyong; Droege, Marcus; Choi, Doil; Kang, Byung-Cheol; Kim, Byung Dong; Park, Minkyu; Kim, Seungill; Yeom, Seon-In; Lee, Yong-Hwan; Choi, Yang-Do; Li, Guangcun; Gao, Jianwei; Liu, Yongsheng; Huang, Shengxiong; Fernandez-Pedrosa, Victoria; Collado, Carmen; Zuniga, Sheila; Wang, Guoping; Cade, Rebecca; Dietrich, Robert A.; Rogers, Jane; Knapp, Sandra; Fei, Zhangjun; White, Ruth A.; Thannhauser, Theodore W.; Giovannoni, James J.; Angel Botella, Miguel; Gilbert, Louise; Gonzalez, Ramon; Goicoechea, Jose Luis; Yu, Yeisoo; Kudrna, David; Collura, Kristi; Wissotski, Marina; Wing, Rod; Schoof, Heiko; Meyers, Blake C.; Gurazada, Aishwarya Bala; Green, Pamela J.; Mathur, Saloni; Vyas, Shailendra; Solanke, Amolkumar U.; Kumar, Rahul; Gupta, Vikrant; Sharma, Arun K.; Khurana, Paramjit; Khurana, Jitendra P.; Tyagi, Akhilesh K.; Dalmay, Tamas; Mohorianu, Irina; Walts, Brandon; Chamala, Srikar; Barbazuk, W. Brad; Li, Jingping; Guo, Hui; Lee, Tae-Ho; Wang, Yupeng; Zhang, Dong; Paterson, Andrew H.; Wang, Xiyin; Tang, Haibao; Barone, Amalia; Chiusano, Maria Luisa; Ercolano, Maria Raffaella; D'Agostino, Nunzio; Di Filippo, Miriam; Traini, Alessandra; Sanseverino, Walter; Frusciante, Luigi; Seymour, Graham B.; Elharam, Mounir; Fu, Ying; Hua, Axin; Kenton, Steven; Lewis, Jennifer; Lin, Shaoping; Najar, Fares; Lai, Hongshing; Qin, Baifang; Qu, Chunmei; Shi, Ruihua; White, Douglas; White, James; Xing, Yanbo; Yang, Keqin; Yi, Jing; Yao, Ziyun; Zhou, Liping; Roe, Bruce A.; Vezzi, Alessandro; D'Angelo, Michela; Zimbello, Rosanna; Schiavon, Riccardo; Caniato, Elisa; Rigobello, Chiara; Campagna, Davide; Vitulo, Nicola; Valle, Giorgio; Nelson, David R.; De Paoli, Emanuele; Szinay, Dora; de Jong, Hans H.; Bai, Yuling; Visser, Richard G. F.; Lankhorst, Rene M. Klein; Beasley, Helen; McLaren, Karen; Nicholson, Christine; Riddle, Claire; Gianese, Giulio; Tomato Genome Consortium / The tomato genome sequence provides insights into fleshy fruit evolution.

In: Nature, Vol. 485, No. 7400, 31.05.2012, p. 635-641.

Research output: Contribution to journalArticle

Bibtex - Download

@article{45aced88a46a4b81872ae76b4d2fa7ac,
title = "The tomato genome sequence provides insights into fleshy fruit evolution",
author = "Shusei Sato and Satoshi Tabata and Hideki Hirakawa and Erika Asamizu and Kenta Shirasawa and Sachiko Isobe and Takakazu Kaneko and Yasukazu Nakamura and Daisuke Shibata and Koh Aoki and Michael Egholm and James Knight and Robert Bogden and Changbao Li and Yang Shuang and Xun Xu and Shengkai Pan and Shifeng Cheng and Xin Liu and Yuanyuan Ren and Jun Wang and Alessandro Albiero and {Dal Pero}, Francesca and Sara Todesco and {Van Eck}, Joyce and Buels, {Robert M.} and Aureliano Bombarely and Gosselin, {Joseph R.} and Minyun Huang and Leto, {Jonathan A.} and Naama Menda and Susan Strickler and Linyong Mao and Shan Gao and Tecle, {Isaak Y.} and Thomas York and Yi Zheng and Vrebalov, {Julia T.} and JeMin Lee and Silin Zhong and Mueller, {Lukas A.} and Stiekema, {Willem J.} and Paolo Ribeca and Tyler Alioto and Wencai Yang and Sanwen Huang and Yongchen Du and Zhonghua Zhang and Jianchang Gao and Yanmei Guo and Xiaoxuan Wang and Ying Li and Jun He and Chuanyou Li and Zhukuan Cheng and Jianru Zuo and Jianfeng Ren and Jiuhai Zhao and Liuhua Yan and Hongling Jiang and Bao Wang and Hongshuang Li and Zhenjun Li and Fuyou Fu and Bingtang Chen and Bin Han and Qi Feng and Danlin Fan and Ying Wang and Hongqing Ling and Yongbiao Xue and Doreen Ware and McCombie, {W. Richard} and Lippman, {Zachary B.} and Jer-Ming Chia and Ke Jiang and Shiran Pasternak and Laura Gelley and Melissa Kramer and Anderson, {Lorinda K.} and Song-Bin Chang and Royer, {Suzanne M.} and Shearer, {Lindsay A.} and Stack, {Stephen M.} and Rose, {Jocelyn K. C.} and Yimin Xu and Nancy Eannetta and Matas, {Antonio J.} and Ryan McQuinn and Tanksley, {Steven D.} and Francisco Camara and Roderic Guigo and Stephane Rombauts and Jeffrey Fawcett and {Van de Peer}, Yves and Dani Zamir and Chunbo Liang and Manuel Spannagl and Heidrun Gundlach and Remy Bruggmann and Klaus Mayer and Zhiqi Jia and Junhong Zhang and Zhibiao Ye and Bishop, {Gerard J.} and Sarah Butcher and Rosa Lopez-Cobollo and Daniel Buchan and Ioannis Filippis and James Abbott and Rekha Dixit and Manju Singh and Archana Singh and Pal, {Jitendra Kumar} and Awadhesh Pandit and Singh, {Pradeep Kumar} and Mahato, {Ajay Kumar} and Vivek Dogra and Kishor Gaikwad and Sharma, {Tilak Raj} and Trilochan Mohapatra and Singh, {Nagendra Kumar} and Mathilde Causse and Christophe Rothan and Thomas Schiex and Celine Noirot and Arnaud Bellec and Christophe Klopp and Corinne Delalande and Helene Berges and Jerome Mariette and Pierre Frasse and Sonia Vautrin and Mohamed Zouine and Alain Latche and Christine Rousseau and Farid Regad and Jean-Claude Pech and Murielle Philippot and Mondher Bouzayen and Pierre Pericard and Sonia Osorio and {Fernandez del Carmen}, Asuncion and Antonio Monforte and Antonio Granell and Rafael Fernandez-Munoz and Mariana Conte and Gabriel Lichtenstein and Fernando Carrari and {De Bellis}, Gianluca and Fabio Fuligni and Clelia Peano and Silvana Grandillo and Pasquale Termolino and Marco Pietrella and Elio Fantini and Giulia Falcone and Alessia Fiore and Giovanni Giuliano and Loredana Lopez and Paolo Facella and Gaetano Perrotta and Loretta Daddiego and Glenn Bryan and Modesto Orozco and Xavier Pastor and David Torrents and {van Schriek}, {Keygene N. V. Marco G. M.} and Feron, {Richard M. C.} and {van Oeveren}, Jan and {de Heer}, Peter and Lorena daPonte and Saskia Jacobs-Oomen and Mike Cariaso and Marcel Prins and {van Eijk}, {Michiel J. T.} and Antoine Janssen and {van Haaren}, {Mark J. J.} and Sung-Hwan Jo and Jungeun Kim and Suk-Yoon Kwon and Sangmi Kim and Dal-Hoe Koo and Sanghyeob Lee and Cheol-Goo Hur and Christopher Clouser and Alain Rico and Asis Hallab and Christiane Gebhardt and Kathrin Klee and Anika Jöcker and Jens Warfsmann and Ulrike Goebel and Shingo Kawamura and Kentaro Yano and Sherman, {Jamie D.} and Hiroyuki Fukuoka and Satomi Negoro and Sarita Bhutty and Parul Chowdhury and Debasis Chattopadhyay and Erwin Datema and Sandra Smit and Schijlen, {Eliog. W. M.} and {van de Belt}, Jose and {van Haarst}, {Jan C.} and Peters, {Sander A.} and {van Staveren}, {Marjo J.} and Henkens, {Marleen H. C.} and Mooyman, {Paul J. W.} and Thamara Hesselink and {van Ham}, {Roeland C. H. J.} and Guoyong Jiang and Marcus Droege and Doil Choi and Byung-Cheol Kang and Kim, {Byung Dong} and Minkyu Park and Seungill Kim and Seon-In Yeom and Yong-Hwan Lee and Yang-Do Choi and Guangcun Li and Jianwei Gao and Yongsheng Liu and Shengxiong Huang and Victoria Fernandez-Pedrosa and Carmen Collado and Sheila Zuniga and Guoping Wang and Rebecca Cade and Dietrich, {Robert A.} and Jane Rogers and Sandra Knapp and Zhangjun Fei and White, {Ruth A.} and Thannhauser, {Theodore W.} and Giovannoni, {James J.} and {Angel Botella}, Miguel and Louise Gilbert and Ramon Gonzalez and Goicoechea, {Jose Luis} and Yeisoo Yu and David Kudrna and Kristi Collura and Marina Wissotski and Rod Wing and Heiko Schoof and Meyers, {Blake C.} and Gurazada, {Aishwarya Bala} and Green, {Pamela J.} and Saloni Mathur and Shailendra Vyas and Solanke, {Amolkumar U.} and Rahul Kumar and Vikrant Gupta and Sharma, {Arun K.} and Paramjit Khurana and Khurana, {Jitendra P.} and Tyagi, {Akhilesh K.} and Tamas Dalmay and Irina Mohorianu and Brandon Walts and Srikar Chamala and Barbazuk, {W. Brad} and Jingping Li and Hui Guo and Tae-Ho Lee and Yupeng Wang and Dong Zhang and Paterson, {Andrew H.} and Xiyin Wang and Haibao Tang and Amalia Barone and Chiusano, {Maria Luisa} and Ercolano, {Maria Raffaella} and Nunzio D'Agostino and {Di Filippo}, Miriam and Alessandra Traini and Walter Sanseverino and Luigi Frusciante and Seymour, {Graham B.} and Mounir Elharam and Ying Fu and Axin Hua and Steven Kenton and Jennifer Lewis and Shaoping Lin and Fares Najar and Hongshing Lai and Baifang Qin and Chunmei Qu and Ruihua Shi and Douglas White and James White and Yanbo Xing and Keqin Yang and Jing Yi and Ziyun Yao and Liping Zhou and Roe, {Bruce A.} and Alessandro Vezzi and Michela D'Angelo and Rosanna Zimbello and Riccardo Schiavon and Elisa Caniato and Chiara Rigobello and Davide Campagna and Nicola Vitulo and Giorgio Valle and Nelson, {David R.} and {De Paoli}, Emanuele and Dora Szinay and {de Jong}, {Hans H.} and Yuling Bai and Visser, {Richard G. F.} and Lankhorst, {Rene M. Klein} and Helen Beasley and Karen McLaren and Christine Nicholson and Claire Riddle and Giulio Gianese and {Tomato Genome Consortium}",
year = "2012",
month = "5",
doi = "10.1038/nature11119",
volume = "485",
pages = "635--641",
journal = "Nature",
issn = "0028-0836",
publisher = "Nature Publishing Group",
number = "7400",

}

RIS (suitable for import to EndNote) - Download

TY - JOUR

T1 - The tomato genome sequence provides insights into fleshy fruit evolution

AU - Sato,Shusei

AU - Tabata,Satoshi

AU - Hirakawa,Hideki

AU - Asamizu,Erika

AU - Shirasawa,Kenta

AU - Isobe,Sachiko

AU - Kaneko,Takakazu

AU - Nakamura,Yasukazu

AU - Shibata,Daisuke

AU - Aoki,Koh

AU - Egholm,Michael

AU - Knight,James

AU - Bogden,Robert

AU - Li,Changbao

AU - Shuang,Yang

AU - Xu,Xun

AU - Pan,Shengkai

AU - Cheng,Shifeng

AU - Liu,Xin

AU - Ren,Yuanyuan

AU - Wang,Jun

AU - Albiero,Alessandro

AU - Dal Pero,Francesca

AU - Todesco,Sara

AU - Van Eck,Joyce

AU - Buels,Robert M.

AU - Bombarely,Aureliano

AU - Gosselin,Joseph R.

AU - Huang,Minyun

AU - Leto,Jonathan A.

AU - Menda,Naama

AU - Strickler,Susan

AU - Mao,Linyong

AU - Gao,Shan

AU - Tecle,Isaak Y.

AU - York,Thomas

AU - Zheng,Yi

AU - Vrebalov,Julia T.

AU - Lee,JeMin

AU - Zhong,Silin

AU - Mueller,Lukas A.

AU - Stiekema,Willem J.

AU - Ribeca,Paolo

AU - Alioto,Tyler

AU - Yang,Wencai

AU - Huang,Sanwen

AU - Du,Yongchen

AU - Zhang,Zhonghua

AU - Gao,Jianchang

AU - Guo,Yanmei

AU - Wang,Xiaoxuan

AU - Li,Ying

AU - He,Jun

AU - Li,Chuanyou

AU - Cheng,Zhukuan

AU - Zuo,Jianru

AU - Ren,Jianfeng

AU - Zhao,Jiuhai

AU - Yan,Liuhua

AU - Jiang,Hongling

AU - Wang,Bao

AU - Li,Hongshuang

AU - Li,Zhenjun

AU - Fu,Fuyou

AU - Chen,Bingtang

AU - Han,Bin

AU - Feng,Qi

AU - Fan,Danlin

AU - Wang,Ying

AU - Ling,Hongqing

AU - Xue,Yongbiao

AU - Ware,Doreen

AU - McCombie,W. Richard

AU - Lippman,Zachary B.

AU - Chia,Jer-Ming

AU - Jiang,Ke

AU - Pasternak,Shiran

AU - Gelley,Laura

AU - Kramer,Melissa

AU - Anderson,Lorinda K.

AU - Chang,Song-Bin

AU - Royer,Suzanne M.

AU - Shearer,Lindsay A.

AU - Stack,Stephen M.

AU - Rose,Jocelyn K. C.

AU - Xu,Yimin

AU - Eannetta,Nancy

AU - Matas,Antonio J.

AU - McQuinn,Ryan

AU - Tanksley,Steven D.

AU - Camara,Francisco

AU - Guigo,Roderic

AU - Rombauts,Stephane

AU - Fawcett,Jeffrey

AU - Van de Peer,Yves

AU - Zamir,Dani

AU - Liang,Chunbo

AU - Spannagl,Manuel

AU - Gundlach,Heidrun

AU - Bruggmann,Remy

AU - Mayer,Klaus

AU - Jia,Zhiqi

AU - Zhang,Junhong

AU - Ye,Zhibiao

AU - Bishop,Gerard J.

AU - Butcher,Sarah

AU - Lopez-Cobollo,Rosa

AU - Buchan,Daniel

AU - Filippis,Ioannis

AU - Abbott,James

AU - Dixit,Rekha

AU - Singh,Manju

AU - Singh,Archana

AU - Pal,Jitendra Kumar

AU - Pandit,Awadhesh

AU - Singh,Pradeep Kumar

AU - Mahato,Ajay Kumar

AU - Dogra,Vivek

AU - Gaikwad,Kishor

AU - Sharma,Tilak Raj

AU - Mohapatra,Trilochan

AU - Singh,Nagendra Kumar

AU - Causse,Mathilde

AU - Rothan,Christophe

AU - Schiex,Thomas

AU - Noirot,Celine

AU - Bellec,Arnaud

AU - Klopp,Christophe

AU - Delalande,Corinne

AU - Berges,Helene

AU - Mariette,Jerome

AU - Frasse,Pierre

AU - Vautrin,Sonia

AU - Zouine,Mohamed

AU - Latche,Alain

AU - Rousseau,Christine

AU - Regad,Farid

AU - Pech,Jean-Claude

AU - Philippot,Murielle

AU - Bouzayen,Mondher

AU - Pericard,Pierre

AU - Osorio,Sonia

AU - Fernandez del Carmen,Asuncion

AU - Monforte,Antonio

AU - Granell,Antonio

AU - Fernandez-Munoz,Rafael

AU - Conte,Mariana

AU - Lichtenstein,Gabriel

AU - Carrari,Fernando

AU - De Bellis,Gianluca

AU - Fuligni,Fabio

AU - Peano,Clelia

AU - Grandillo,Silvana

AU - Termolino,Pasquale

AU - Pietrella,Marco

AU - Fantini,Elio

AU - Falcone,Giulia

AU - Fiore,Alessia

AU - Giuliano,Giovanni

AU - Lopez,Loredana

AU - Facella,Paolo

AU - Perrotta,Gaetano

AU - Daddiego,Loretta

AU - Bryan,Glenn

AU - Orozco,Modesto

AU - Pastor,Xavier

AU - Torrents,David

AU - van Schriek,Keygene N. V. Marco G. M.

AU - Feron,Richard M. C.

AU - van Oeveren,Jan

AU - de Heer,Peter

AU - daPonte,Lorena

AU - Jacobs-Oomen,Saskia

AU - Cariaso,Mike

AU - Prins,Marcel

AU - van Eijk,Michiel J. T.

AU - Janssen,Antoine

AU - van Haaren,Mark J. J.

AU - Jo,Sung-Hwan

AU - Kim,Jungeun

AU - Kwon,Suk-Yoon

AU - Kim,Sangmi

AU - Koo,Dal-Hoe

AU - Lee,Sanghyeob

AU - Hur,Cheol-Goo

AU - Clouser,Christopher

AU - Rico,Alain

AU - Hallab,Asis

AU - Gebhardt,Christiane

AU - Klee,Kathrin

AU - Jöcker,Anika

AU - Warfsmann,Jens

AU - Goebel,Ulrike

AU - Kawamura,Shingo

AU - Yano,Kentaro

AU - Sherman,Jamie D.

AU - Fukuoka,Hiroyuki

AU - Negoro,Satomi

AU - Bhutty,Sarita

AU - Chowdhury,Parul

AU - Chattopadhyay,Debasis

AU - Datema,Erwin

AU - Smit,Sandra

AU - Schijlen,Eliog. W. M.

AU - van de Belt,Jose

AU - van Haarst,Jan C.

AU - Peters,Sander A.

AU - van Staveren,Marjo J.

AU - Henkens,Marleen H. C.

AU - Mooyman,Paul J. W.

AU - Hesselink,Thamara

AU - van Ham,Roeland C. H. J.

AU - Jiang,Guoyong

AU - Droege,Marcus

AU - Choi,Doil

AU - Kang,Byung-Cheol

AU - Kim,Byung Dong

AU - Park,Minkyu

AU - Kim,Seungill

AU - Yeom,Seon-In

AU - Lee,Yong-Hwan

AU - Choi,Yang-Do

AU - Li,Guangcun

AU - Gao,Jianwei

AU - Liu,Yongsheng

AU - Huang,Shengxiong

AU - Fernandez-Pedrosa,Victoria

AU - Collado,Carmen

AU - Zuniga,Sheila

AU - Wang,Guoping

AU - Cade,Rebecca

AU - Dietrich,Robert A.

AU - Rogers,Jane

AU - Knapp,Sandra

AU - Fei,Zhangjun

AU - White,Ruth A.

AU - Thannhauser,Theodore W.

AU - Giovannoni,James J.

AU - Angel Botella,Miguel

AU - Gilbert,Louise

AU - Gonzalez,Ramon

AU - Goicoechea,Jose Luis

AU - Yu,Yeisoo

AU - Kudrna,David

AU - Collura,Kristi

AU - Wissotski,Marina

AU - Wing,Rod

AU - Schoof,Heiko

AU - Meyers,Blake C.

AU - Gurazada,Aishwarya Bala

AU - Green,Pamela J.

AU - Mathur,Saloni

AU - Vyas,Shailendra

AU - Solanke,Amolkumar U.

AU - Kumar,Rahul

AU - Gupta,Vikrant

AU - Sharma,Arun K.

AU - Khurana,Paramjit

AU - Khurana,Jitendra P.

AU - Tyagi,Akhilesh K.

AU - Dalmay,Tamas

AU - Mohorianu,Irina

AU - Walts,Brandon

AU - Chamala,Srikar

AU - Barbazuk,W. Brad

AU - Li,Jingping

AU - Guo,Hui

AU - Lee,Tae-Ho

AU - Wang,Yupeng

AU - Zhang,Dong

AU - Paterson,Andrew H.

AU - Wang,Xiyin

AU - Tang,Haibao

AU - Barone,Amalia

AU - Chiusano,Maria Luisa

AU - Ercolano,Maria Raffaella

AU - D'Agostino,Nunzio

AU - Di Filippo,Miriam

AU - Traini,Alessandra

AU - Sanseverino,Walter

AU - Frusciante,Luigi

AU - Seymour,Graham B.

AU - Elharam,Mounir

AU - Fu,Ying

AU - Hua,Axin

AU - Kenton,Steven

AU - Lewis,Jennifer

AU - Lin,Shaoping

AU - Najar,Fares

AU - Lai,Hongshing

AU - Qin,Baifang

AU - Qu,Chunmei

AU - Shi,Ruihua

AU - White,Douglas

AU - White,James

AU - Xing,Yanbo

AU - Yang,Keqin

AU - Yi,Jing

AU - Yao,Ziyun

AU - Zhou,Liping

AU - Roe,Bruce A.

AU - Vezzi,Alessandro

AU - D'Angelo,Michela

AU - Zimbello,Rosanna

AU - Schiavon,Riccardo

AU - Caniato,Elisa

AU - Rigobello,Chiara

AU - Campagna,Davide

AU - Vitulo,Nicola

AU - Valle,Giorgio

AU - Nelson,David R.

AU - De Paoli,Emanuele

AU - Szinay,Dora

AU - de Jong,Hans H.

AU - Bai,Yuling

AU - Visser,Richard G. F.

AU - Lankhorst,Rene M. Klein

AU - Beasley,Helen

AU - McLaren,Karen

AU - Nicholson,Christine

AU - Riddle,Claire

AU - Gianese,Giulio

AU - Tomato Genome Consortium

PY - 2012/5/31

Y1 - 2012/5/31

N2 - Tomato (Solanum lycopersicum) is a major crop plant and a model system for fruit development. Solanum is one of the largest angiosperm genera(1) and includes annual and perennial plants from diverse habitats. Here we present a high-quality genome sequence of domesticated tomato, a draft sequence of its closest wild relative, Solanum pimpinellifolium(2), and compare them to each other and to the potato genome (Solanum tuberosum). The two tomato genomes show only 0.6% nucleotide divergence and signs of recent admixture, but show more than 8% divergence from potato, with nine large and several smaller inversions. In contrast to Arabidopsis, but similar to soybean, tomato and potato small RNAs map predominantly to gene-rich chromosomal regions, including gene promoters. The Solanum lineage has experienced two consecutive genome triplications: one that is ancient and shared with rosids, and a more recent one. These triplications set the stage for the neofunctionalization of genes controlling fruit characteristics, such as colour and fleshiness.</p>

AB - Tomato (Solanum lycopersicum) is a major crop plant and a model system for fruit development. Solanum is one of the largest angiosperm genera(1) and includes annual and perennial plants from diverse habitats. Here we present a high-quality genome sequence of domesticated tomato, a draft sequence of its closest wild relative, Solanum pimpinellifolium(2), and compare them to each other and to the potato genome (Solanum tuberosum). The two tomato genomes show only 0.6% nucleotide divergence and signs of recent admixture, but show more than 8% divergence from potato, with nine large and several smaller inversions. In contrast to Arabidopsis, but similar to soybean, tomato and potato small RNAs map predominantly to gene-rich chromosomal regions, including gene promoters. The Solanum lineage has experienced two consecutive genome triplications: one that is ancient and shared with rosids, and a more recent one. These triplications set the stage for the neofunctionalization of genes controlling fruit characteristics, such as colour and fleshiness.</p>

U2 - 10.1038/nature11119

DO - 10.1038/nature11119

M3 - Article

VL - 485

SP - 635

EP - 641

JO - Nature

T2 - Nature

JF - Nature

SN - 0028-0836

IS - 7400

ER -

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