Discovery - University of Dundee - Online Publications

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College of Life Sciences

  1. DNA entropy reveals a significant difference in complexity between housekeeping and tissue specific gene promoters

    Thomas, D., Finan, C., Newport, M. J. & Jones, S. Oct 2015 In : Computational Biology and Chemistry. 58, p. 19-24 6 p.

    Research output: Contribution to journalArticle

  2. A proposed harmonized LPS molecular-subtyping scheme for Cronobacter species

    Yan, Q., Jarvis, K. G., Chase, H. R., Hébert, K., Trach, L. H., Lee, C., Sadowski, J., Lee, B., Hwang, S., Sathyamoorthy, V., Mullane, N., Pava-Ripoll, M., Iversen, C., Pagotto, F., Fanning, S. & Tall, B. D. Sep 2015 In : Food Microbiology. 50, p. 38-43 6 p.

    Research output: Contribution to journalArticle

  3. The biocathode of microbial electrochemical systems and microbially-influenced corrosion

    Kim, B. H., Lim, S. S., Daud, W. R. W., Gadd, G. M. & Chang, I. S. Aug 2015 In : Bioresource Technology. 190, p. 395-401 7 p.

    Research output: Contribution to journalArticle

  4. Inhibition of the ERCC1-XPF structure-specific endonuclease to overcome cancer chemoresistance

    McNeil, E. M., Astell, K. R., Ritchie, A. M., Shave, S., Houston, D. R., Bakrania, P., Jones, H. M., Khurana, P., Wallace, C., Chapman, T., Wear, M. A., Walkinshaw, M. D., Saxty, B. & Melton, D. W. 1 Jul 2015 In : DNA Repair. 31, p. 19-28 10 p.

    Research output: Contribution to journalArticle

  5. Maintenance of distinct melanocyte populations in the interfollicular epidermis

    Glover, J. D., Knolle, S., Wells, K. L., Liu, D., Jackson, I. J., Mort, R. L. & Headon, D. J. 1 Jul 2015 In : Pigment Cell and Melanoma Research. 28, 4, p. 476-480 5 p.

    Research output: Contribution to journalArticle

  6. Global proteomics analysis of the response to starvation in C. elegans

    Larance, M., Pourkarimi, E., Wang, B., Brenes Murillo, A., Kent, R., Lamond, A. I. & Gartner, A. Jul 2015 In : Molecular & Cellular Proteomics. 14, 7, 26 p., MCP.2014.044289

    Research output: Contribution to journalArticle

  7. A link between ATP and SUR2A: a novel mechanism explaining cardioprotection at high altitude

    Mohammed Abdul, K. S., Jovanovic, S., Du, Q., Sukhodub, A. & Jovanovic, A. 15 Jun 2015 In : International Journal of Cardiology. 189, p. 73-76 4 p.

    Research output: Contribution to journalLetter

  8. GRP78 is implicated in the modulation of tumor aerobic glycolysis by promoting autophagic degradation of IKKβ

    Li, Z., Wang, Y., Newton, I. P., Zhang, L., Ji, P. & Li, Z. Jun 2015 In : Cellular Signalling. 27, 6, p. 1237-1245 9 p.

    Research output: Contribution to journalArticle

  9. Progressive dopaminergic alterations and mitochondrial abnormalities in LRRK2 G2019S knock in mice

    Yue, M., Hinkle, K., Davies, P., Trushina, E., Fiesel, F., Christenson, T., Schroeder, A., Zhang, L., Bowles, E., Behrouz, B., Lincoln, S., Beevers, J., Milnerwood, A., Kurti, A., McLean, P. J., Fryer, J. D., Springer, W., Dickson, D., Farrer, M. & Melrose, H. Jun 2015 In : Neurobiology of Disease. 78, p. 172-195 24 p.

    Research output: Contribution to journalArticle

  10. Application of RNAi to genomic drug target validation in schistosomes

    Guidi, A., Mansour, N. R., Paveley, R. A., Carruthers, I. M., Besnard, J., Hopkins, A. L., Gilbert, I. H. & Bickle, Q. D. 20 May 2015 In : PLoS Neglected Tropical Diseases. 9, 5, 22 p., e0003801

    Research output: Contribution to journalArticle

  11. Characterization of Arabidopsis transcriptional responses to different aphid species reveals genes that contribute to host susceptibility and non-host resistance

    Jaouannet, M., Morris, J. A., Hedley, P. E. & Bos, J. I. B. 20 May 2015 In : PLoS Pathogens. 11, 5, 26 p., e1004918

    Research output: Contribution to journalArticle

  12. Intestinal intraepithelial lymphocyte activation promotes innate antiviral resistance

    Swamy, M., Abeler-Dörner, L., Chettle, J., Mahlakõiv, T., Goubau, D., Chakravarty, P., Ramsay, G., Reis E. Sousa, C., Staeheli, P., Blacklaws, B. A., Heeney, J. L. & Hayday, A. C. 19 May 2015 In : Nature Communications. 6, 12 p., 7090

    Research output: Contribution to journalArticle

  13. Protein degradation and dynamic tRNA thiolation fine-tune translation at elevated temperatures

    Tyagi, K. & Pedrioli, P. G. A. 19 May 2015 In : Nucleic Acids Research. 43, 9, p. 4701-4712 12 p.

    Research output: Contribution to journalArticle

  14. Discovery of a pyrrolopyrimidine (JH-II-127), a highly potent, selective, and brain penetrant LRRK2 inhibitor

    Hatcher, J. M., Zhang, J., Choi, H. G., Ito, G., Alessi, D. R. & Gray, N. S. 14 May 2015 In : ACS Medicinal Chemistry Letters. 6, 5, p. 584-589 6 p.

    Research output: Contribution to journalArticle

  15. Neural differentiation of mouse embryonic stem cells in serum-free monolayer culture

    Wongpaiboonwattana, W. & Stavridis, M. P. 14 May 2015 In : JoVE: Journal of Visualized Experiments. 99, e52823

    Research output: Contribution to journalArticle

  16. Structural characterization of LRRK2 inhibitors

    Gilsbach, B. K., Messias, A. C., Ito, G., Sattler, M., Alessi, D. R., Wittinghofer, A. & Kortholt, A. 14 May 2015 In : Journal of Medicinal Chemistry. 58, 9, p. 3751-3756 6 p.

    Research output: Contribution to journalArticle

  17. The early metazoan Trichoplax adhaerens possesses a functional O-GlcNAc system

    Selvan, N., Mariappa, D., van den Toorn, H. W. P., Heck, A. J. R., Ferenbach, A. T. & van Aalten, D. M. F. 8 May 2015 In : Journal of Biological Chemistry. p. 11969-11982 14 p.

    Research output: Contribution to journalArticle

  18. Barley: a translational model for adaptation to climate change

    Dawson, I. K., Russell, J., Powell, W., Steffenson, B., Thomas, W. T. B. & Waugh, R. 1 May 2015 In : New Phytologist. 206, 3, p. 913-931 19 p.

    Research output: Contribution to journalArticle

  19. Pharmacological inhibition of ULK1 kinase blocks mammalian target of rapamycin (mTOR)-dependent autophagy

    Petherick, K. J., Conway, O. J. L., Mpamhanga, C., Osborne, S. A., Kamal, A., Saxty, B. & Ganley, I. G. 1 May 2015 In : Journal of Biological Chemistry. 290, 18, p. 11376-11383 8 p.

    Research output: Contribution to journalArticle

  20. Quantitative proteome analysis of temporally-resolved phagosomes following uptake via key phagocytic receptors

    Dill, B., Gierliński, M., Härtlova, A., González Arandilla, A., Guo, M., Clarke, R. G. & Trost, M. 1 May 2015 In : Molecular & Cellular Proteomics. 14, 5, p. 1334 1349 p., 16

    Research output: Contribution to journalArticle

  21. Targeting Cullin-RING E3 ubiquitin ligases for drug discovery: structure, assembly and small-molecule modulation

    Bulatov, E. & Ciulli, A. 1 May 2015 In : Biochemical Journal. 467, 3, p. 365-386 22 p.

    Research output: Contribution to journalArticle

  22. Changes in the osmolarity of the embryonic microenvironment induce neural tube defects

    Jin, Y. M., Wang, G., Zhang, N., Wei, Y., Li, S., Chen, Y., Chuai, M., Lee, H. S. S., Hocher, B. & Yang, X. May 2015 In : Molecular Reproduction and Development. 82, 5, p. 365-376 12 p.

    Research output: Contribution to journalArticle

  23. Identification and structure solution of fragment hits against kinetoplastid N-myristoyltransferase

    Robinson, D. A. & Wyatt, P. G. May 2015 In : Acta Crystallographica Section F: Structural Biology Communications. 71, 5, p. 586-593 8 p.

    Research output: Contribution to journalArticle

  24. In search of future earths: assessing the possibility of finding Earth analogues in the later stages of their habitable lifetimes

    O'Malley-James, J. T., Greaves, J. S., Raven, J. A. & Cockell, C. S. May 2015 In : Astrobiology. 15, 5, p. 400-411 12 p.

    Research output: Contribution to journalArticle

  25. Macromolecular crystallography and what it can contribute to antiparasite drug discovery

    Hunter, W. N. & Weiss, M. S. May 2015 In : Acta Crystallographica Section F: Structural Biology Communications. 71, 5, p. 483-484 2 p.

    Research output: Contribution to journalEditorial

  26. Mild hypoxia in vivo regulates cardioprotective SUR2A: A role for Akt and LDH

    Mohammed Abdul, K. S., Jovanović, S., Du, Q., Sukhodub, A. & Jovanović, A. May 2015 In : Biochimica et Biophysica Acta. Molecular Basis of Disease. 1852, 5, p. 709-719 11 p.

    Research output: Contribution to journalArticle

  27. Multidimentional proteomics for cell biology

    Larance, M. & Lamond, A. I. May 2015 In : Nature Reviews Molecular Cell Biology. 16, 5, p. 269-280 12 p.

    Research output: Contribution to journalArticle

  28. Myc and mRNA capping

    Dunn, S. & Cowling, V. H. May 2015 In : Biochimica et Biophysica Acta - Gene Regulatory Mechanisms. 1849, 5, p. 501-505 5 p.

    Research output: Contribution to journalArticle

  29. Optimising ketocarotenoid production in potato tubers: Effect of genetic background, transgene combinations and environment

    Campbell, R., Morris, W. L., Mortimer, C. L., Misawa, N., Ducreux, L. J. M., Morris, J. A., Hedley, P. E., Fraser, P. D. & Taylor, M. A. May 2015 In : Plant Science. 234, p. 27-37 11 p.

    Research output: Contribution to journalArticle

  30. The Top 10 oomycete pathogens in molecular plant pathology

    Kamoun, S. , Furzer, O. , Jones, J. D. G. , Judelson, H. S. , Ali, G. S. , Dalio, R. J. D. , Roy, S. G. , Schena, L. , Zambounis, A. , Panabières, F. , Cahill, D. , Ruocco, M. , Figueiredo, A. , Chen, X. R. , Hulvey, J. , Stam, R. , Lamour, K. , Gijzen, M. , Tyler, B. M. , Grünwald, N. J. & 14 others Mukhtar, M. S., Tomé, D. F. A., Tör, M., Van Den Ackerveken, G., McDowell, J., Daayf, F., Fry, W. E., Lindqvist-Kreuze, H., Meijer, H. J. G., Petre, B., Ristaino, J., Yoshida, K., Birch, P. R. J. & Govers, F. May 2015 In : Molecular Plant Pathology. 16, 4, p. 413-434 22 p.

    Research output: Contribution to journalArticle

  31. Development of a custom-designed, pan genomic DNA microarray to characterize strain-level diversity among Cronobacter spp.

    Tall, B. D. , Gangiredla, J. , Gopinath, G. R. , Yan, Q. , Chase, H. R. , Lee, B. , Hwang, S. , Trach, L. , Park, E. , Yoo, Y. , Chung, T. , Jackson, S. A. , Patel, I. R. , Sathyamoorthy, V. , Pava-Ripoll, M. , Kotewicz, M. L. , Carter, L. , Iversen, C. , Pagotto, F. , Stephan, R. & 3 others Lehner, A., Fanning, S. & Grim, C. J. 30 Apr 2015 In : Frontiers in Pediatrics. 3, 11 p., 36

    Research output: Contribution to journalArticle

  32. Editorial on plants as alternative hosts for human and animal pathogens

    Holden, N. J., Jackson, R. W. & Schikora, A. 30 Apr 2015 In : Frontiers in Microbiology. 6, 2 p., 397

    Research output: Contribution to journalEditorial

  33. Rapid generation of endogenously driven transcriptional reporters in cells through CRISPR/Cas9

    Rojas-Fernandez, A., Herhaus, L., Macartney, T., Lachaud, C., Hay, R. T. & Sapkota, G. P. 29 Apr 2015 In : Scientific Reports. 5, 6 p., 9811

    Research output: Contribution to journalArticle

  34. HIF-1α, a novel piece in the NF-κB puzzle

    Bandarra, D. & Rocha, S. 28 Apr 2015 In : Infammation and Cell Signaling. 2, 1, 4 p., e792

    Research output: Contribution to journalArticle

  35. Interfacial self-assembly of a bacterial hydrophobin

    Bromley, K. M., Morris, R. J., Hobley, L., Brandani, G., Gillespie, R. M. C., McCluskey, M., Zachariae, U., Marenduzzo, D., Stanley-Wall, N. R. & MacPhee, C. E. 28 Apr 2015 In : Proceedings of the National Academy of Sciences of the United States of America. 112, 17, p. 5419-5424 6 p.

    Research output: Contribution to journalArticle

  36. Ubiquitination of the Dishevelled DIX domain blocks its head-to-tail polymerization

    Madrzak, J., Fiedler, M., Johnson, C. M., Ewan, R., Knebel, A., Bienz, M. & Chin, J. W. 24 Apr 2015 In : Nature Communications. 6, 11 p., 6718

    Research output: Contribution to journalArticle

  37. A mass spectrometric-derived cell surface protein atlas

    Bausch-Fluck, D., Hofmann, A., Bock, T., Frei, A. P., Cerciello, F., Jacobs, A., Moest, H., Omasits, U., Gundry, R. L., Yoon, C., Schiess, R., Schmidt, A., Mirkowska, P., Härtlová, A., Van Eyk, J. E., Bourquin, J. P., Aebersold, R., Boheler, K. R., Zandstra, P. & Wollscheid, B. 20 Apr 2015 In : PLoS ONE. 10, 4, e0121314

    Research output: Contribution to journalArticle

  38. A conserved signalling pathway for amoebozoan encystation that was co-opted for multicellular development

    Kawabe, Y., Schilde, C., Du, Q. & Schaap, P. 16 Apr 2015 In : Scientific Reports. 5, 6 p., 9644

    Research output: Contribution to journalArticle

  39. Casein kinase 2 (CK2) phosphorylates the deubiquitylase OTUB1 at Ser16 to trigger its nuclear localization

    Herhaus, L., Perez-Oliva, A. B., Cozza, G., Gourlay, R., Weidlich, S., Campbell, D. G., Pinna, L. A. & Sapkota, G. P. 14 Apr 2015 In : Science Signaling. 8, 372, 13 p., ra35

    Research output: Contribution to journalArticle

  40. Modelling the genetic architecture of flowering time control in barley through nested association mapping

    Maurer, A., Draba, V., Jiang, Y., Schnaithmann, F., Sharma, R., Schumann, E., Kilian, B., Reif, J. C. & Pillen, K. 12 Apr 2015 In : BMC Genomics. 16, 12 p., 290

    Research output: Contribution to journalArticle

  41. Modelling cell movement, cell differentiation, cell sorting and proportion regulation in Dictyostelium discoideum aggregations

    Pineda, M., Weijer, C. J. & Eftimie, R. 7 Apr 2015 In : Journal of Theoretical Biology. 370, p. 135-150 16 p.

    Research output: Contribution to journalArticle

  42. Modelling cell movement, cell differentiation, cell sorting and proportion regulation in dictyostelium discoideum aggregations

    Pineda, M., Weijer, C. J. & Eftimie, R. 7 Apr 2015 In : Journal of Theoretical Biology. 370, p. 135-150 16 p.

    Research output: Contribution to journalArticle

  43. K29-selective ubiquitin binding domain reveals structural basis of specificity and heterotypic nature of K29 polyubiquitin

    Kristariyanto, Y. A., Abdul Rehman, S. A., Campbell, D. G., Morrice, N. A., Johnson, C., Toth, R. & Kulathu, Y. 2 Apr 2015 In : Molecular Cell. 58, 1, p. 83-94 12 p.

    Research output: Contribution to journalArticle

  44. Compartmentation of defensive compound synthesis in a red alga

    Raven, J. A. 1 Apr 2015 In : Journal of Applied Phycology. 51, 2, p. 222-224 3 p.

    Research output: Contribution to journalArticle

  45. Dose-dependent effects of Allopurinol on human foreskin fibroblast cell and human umbilical vein endothelial cell under hypoxia

    Sun, Y., George, J. & Rocha, S. 1 Apr 2015 In : PLoS ONE. 10, 4, 12 p., e0123649

    Research output: Contribution to journalArticle

  46. Dose-dependent effects of Allopurinol on human foreskin fibroblast cells and human umbilical vein endothelial cells under hypoxia

    Sun, Y., George, J. & Rocha, S. 1 Apr 2015 In : PLoS ONE. 10, 4, 12 p., e0123649

    Research output: Contribution to journalArticle

  47. Phenolic compounds in blackcurrant (Ribes nigrum L.) leaves relative to leaf position and harvest date

    Vagiri, M., Conner, S., Stewart, D., Andersson, S. C., Verrall, S., Johansson, E. & Rumpunen, K. 1 Apr 2015 In : Food Chemistry. 172, p. 135-142 8 p.

    Research output: Contribution to journalArticle

  48. The role of hypoxia in inflammatory disease (Review)

    Biddlestone, J., Bandarra, D. & Rocha, S. 1 Apr 2015 In : International Journal of Molecular Medicine. 35, 4, p. 859-869 11 p.

    Research output: Contribution to journalArticle

  49. Rhizobium leguminosarum HupE is a highly-specific diffusion facilitator for nickel uptake

    Albareda, M., Rodrigue, A., Brito, B., Ruiz-Argüeso, T., Imperial, J., Mandrand-Berthelot, M. A. & Palacios, J. Apr 2015 In : Metallomics: Integrated Biometal Science. 7, 4, p. 691-701 11 p.

    Research output: Contribution to journalArticle

  50. AMPK: positive and negative regulation, and its role in whole-body energy homeostasis

    Hardie, D. G. Apr 2015 In : Current Opinion in Cell Biology. 33, April, p. 1-7 7 p.

    Research output: Contribution to journalArticle

  51. Improving intercropping: a synthesis of research in agronomy, plant physiology and ecology

    Brooker, R. W. , Bennett, A. E. , Cong, W. F. , Daniell, T. J. , George, T. S. , Hallett, P. D. , Hawes, C. , Iannetta, P. P. M. , Jones, H. G. , Karley, A. J. , Li, L. , Mckenzie, B. M. , Pakeman, R. J. , Paterson, E. , Schöb, C. , Shen, J. , Squire, G. , Watson, C. A. , Zhang, C. , Zhang, F. & 2 others Zhang, J. & White, P. J. Apr 2015 In : New Phytologist. 206, 1, p. 107-117 11 p.

    Research output: Contribution to journalArticle

  52. Kinetochore-microtubule error correction is driven by differentially regulated interaction modes

    Kalantzaki, M., Kitamura, E., Zhang, T., Mino, A., Novák , B. & Tanaka, T. U. Apr 2015 In : Nature Cell Biology. 17, 4, p. 421-433 13 p.

    Research output: Contribution to journalArticle

  53. Myosin-II-mediated cell shape changes and cell intercalation contribute to primitive streak formation

    Rozbicki, E., Chuai, M., Karjalainen, A., Song, F., Sang, H. M., Martin, R., Knolker, H-J., MacDonald, M. & Weijer, C. J. Apr 2015 In : Nature Cell Biology. 17, 4, p. 397-408 12 p.

    Research output: Contribution to journalArticle

  54. Photosynthesis in reproductive structures: costs and benefits

    Raven, J. A. & Griffiths, H. Apr 2015 In : Journal of Experimental Botany. 66, 7, p. 1699-1705 7 p.

    Research output: Contribution to journalArticle

  55. Plant lignin content altered by soil microbial community

    Bennett, A. E., Grussu, D., Kam, J., Caul, S. & Halpin, C. Apr 2015 In : New Phytologist. 206, 1, p. 166-174 9 p.

    Research output: Contribution to journalArticle

  56. Ribozymes: ancient and modern

    Lilley, D. M. J. Apr 2015 In : Biochemist. 37, 2, p. 4-8 5 p.

    Research output: Contribution to journalArticle

  57. RNA catalysis-is that it?

    Wilson, T. J. & Lilley, D. M. J. Apr 2015 In : RNA: a Publication of the RNA Society. 21, 4, p. 534-537 4 p.

    Research output: Contribution to journalArticle

  58. SlyD-dependent nickel delivery limits maturation of [NiFe]-hydrogenases in late-stationary phase Escherichia coli cells

    Pinske, C., Sargent, F. & Sawers, R. G. Apr 2015 In : Metallomics: Integrated Biometal Science. 7, 4, p. 683-690 8 p.

    Research output: Contribution to journalArticle

  59. An alternate route to phosphorylating DegU of Bacillus subtilis using acetyl phosphate

    Cairns, L. S., Martyn, J. E., Bromley, K. & Stanley-Wall, N. R. 31 Mar 2015 In : BMC Microbiology. 15, 12 p., 78

    Research output: Contribution to journalArticle

  60. Proteasomal modulation of cellular SNAT2 (SLC38A2) abundance and function by unsaturated fatty acid availability

    Nardi, F., Hoffmann, T. M., Stretton, C., Cwiklinski, E., Taylor, P. M. & Hundal, H. S. 27 Mar 2015 In : Journal of Biological Chemistry. 290, 13, p. 8173-8184 12 p.

    Research output: Contribution to journalArticle

  61. SINE transcription by RNA polymerase III is suppressed by histone methylation but not by DNA methylation

    Varshney, D., Vavrova-Anderson, J., Oler, A. J., Cowling, V. H., Cairns, B. R. & White, R. J. 23 Mar 2015 In : Nature Communications. 6, 12 p., 6569

    Research output: Contribution to journalArticle

  62. Ubiquitin-C-terminal hydrolases cleave isopeptide and peptide-linked ubiquitin from structured proteins but do not edit ubiquitin homopolymers

    Bett, J. S., Ritorto, M. S., Ewan, R., Jaffray, E. G., Virdee, S., Chin, J. W., Knebel, A., Kurz, T., Trost, M., Tatham, M. H. & Hay, R. T. 15 Mar 2015 In : Biochemical Journal. 466, 3, p. 489-498 10 p.

    Research output: Contribution to journalArticle

  63. Structure and function of the bacterial root microbiota in wild and domesticated barley

    Bulgarelli, D., Garrido-Oter, R., Münch, P. C., Weiman, A., Dröge, J., Pan, Y., McHardy, A. C. & Schulze-Lefert, P. 11 Mar 2015 In : Cell Host & Microbe. 17, 3, p. 392-403 12 p.

    Research output: Contribution to journalArticle

  64. Regulation of autocrine signaling in subsets of sympathetic neurons has regional effects on tissue innervation

    McWilliams, T. G., Howard, L., Wyatt, S. & Davies, A. M. 10 Mar 2015 In : Cell Reports. 10, 9, p. 1443-1449 7 p.

    Research output: Contribution to journalArticle

  65. Loss-of-function mutations in CAST cause peeling skin, leukonychia, acral punctate keratoses, cheilitis, and knuckle pads

    Lin, Z. , Zhao, J. , Nitoiu, D. , Scott, C. A. , Plagnol, V. , Smith, F. J. D. , Wilson, N. J. , Cole, C. , Schwartz, M. E. , McLean, W. H. I. , Wang, H. , Feng, C. , Duo, L. , Zhou, E. Y. , Ren, Y. , Dai, L. , Chen, Y. , Zhang, J. , Xu, X. , O'Toole, E. A. & 2 others Kelsell, D. P. & Yang, Y. 5 Mar 2015 In : American Journal of Human Genetics. 96, 3, p. 440-447 8 p.

    Research output: Contribution to journalArticle

  66. Misexpression of BRE gene in the developing chick neural tube affects neurulation and somitogenesis

    Wang, G., Li, Y., Wang, X-Y., Chuai, M., Chan, J. Y-H., Lei, J., Münsterberg, A., Lee, K. K. H. & Yang, X. 1 Mar 2015 In : Molecular Biology of the Cell. 26, 5, p. 978-992 15 p.

    Research output: Contribution to journalArticle

  67. Alternative splicing of mini-exons in the Arabidopsis leaf rust receptor-like kinase LRK10 genes affects subcellular localisation

    Shin, K. H., Yang, S. H., Lee, J. Y., Lim, C. W., Lee, S. C., Brown, J. W. S. & Kim, S. H. Mar 2015 In : Plant Cell Reports. 34, 3, p. 495-505 11 p.

    Research output: Contribution to journalArticle

  68. Evaluation of in-situ magnetic signals from iron oxide nanoparticle-labeled PC12 cells by atomic force microscopy

    Wang, L., Min, Y., Wang, Z., Riggio, C., Calatayud, M. P., Pinkernelle, J., Raffa, V., Goya, G. F. ., Keilhoff, G. & Cuschieri, A. Mar 2015 In : Journal of Biomedical Nanotechnology. 11, 3, p. 457-468 12 p.

    Research output: Contribution to journalArticle

  69. Expression, purification and renaturation of truncated human integrin β1 from inclusion bodies of Escherichia coli

    Shi, T., Zhang, L., Li, Z., Newton, I. P. & Zhang, Q. Mar 2015 In : Protein Expression and Purification. 107, p. 13-19 7 p.

    Research output: Contribution to journalArticle

  70. Gene expression profiling in pachyonychia congenita skin

    Cao, Y. A., Hickerson, R. P., Seegmiller, B. L., Grapov, D., Gross, M. M., Bessette, M. R., Phinney, B. S., Flores, M. A., Speaker, T. J., Vermeulen, A., Bravo, A. A., Bruckner, A. L., Milstone, L. M., Schwartz, M. E., Rice, R. H. & Kaspar, R. L. Mar 2015 In : Journal of Dermatological Science. 77, 3, p. 156-165 10 p.

    Research output: Contribution to journalArticle

  71. Identification of caveolar resident proteins in ventricular myocytes using a quantitative proteomic approach: dynamic changes in caveolar composition following adrenoceptor activation

    Wypijewski, K. J., Tinti, M., Chen, W., Lamont, D., Ashford, M. L. J., Calaghan, S. C. & Fuller, W. Mar 2015 In : Molecular & Cellular Proteomics. 14, 3, p. 596-608 13 p.

    Research output: Contribution to journalArticle

  72. The plant microbiome at work

    Schlaeppi, K. & Bulgarelli, D. Mar 2015 In : Molecular Plant - Microbe Interactions. 28, 3, p. 212-217 6 p.

    Research output: Contribution to journalArticle

  73. ICOS coreceptor signaling inactivates the transcription factor FOXO1 to promote Tfh cell differentiation

    Stone, E. L., Pepper, M., Katayama, C. D., Kerdiles, Y. M., Lai, C-Y., Emslie, E., Lin, Y. C., Yang, E., Goldrath, A. W., Li, M. O., Cantrell, D. A. & Hedrick, S. M. 17 Feb 2015 In : Immunity. 42, 2, p. 239-251 13 p.

    Research output: Contribution to journalArticle

  74. Decreased adipogenesis and adipose tissue in mice with inactivated protein phosphatase 5

    Jacob, W., Rosenzweig, D., Vázquez-Martin, C., Duce, S. L. & Cohen, P. T. W. 15 Feb 2015 In : Biochemical Journal. 466, 1, p. 163-176 14 p.

    Research output: Contribution to journalArticle

  75. The Dictyostelium prestalk inducer differentiation inducing factor-1 (DIF-1) triggers unexpectedly complex global phosphorylation changes

    Sugden, C., Urbaniak, M. D., Araki, T. & Williams, J. G. 15 Feb 2015 In : Molecular Biology of the Cell. 26, 4, p. 805-820 16 p.

    Research output: Contribution to journalArticle

  76. Biophysical studies on interactions and assembly of full-size E3 ubiquitin ligase: suppressor of cytokine signaling 2 (SOCS2):ElonginBC:Cullin5:RING-box protein 2 (Rbx2)

    Bulatov, E., Martin, E. M., Chatterjee, S., Knebel, A., Shimamura, S., Konijnenberg, A., Johnson, C., Zinn, N., Grandi, P., Sobott, F. & Ciulli, A. 13 Feb 2015 In : Journal of Biological Chemistry. 290, 7, p. 4178-4191 14 p.

    Research output: Contribution to journalArticle

  77. Erratum: dynamic SUMO modification regulates mitotic chromosome assembly and cell cycle progression in Caenorhabditis elegans

    Pelisch, F., Sonneville, R., Pourkarimi, E., Agostinho, A., Blow, J. J., Gartner, A. & Hay, R. T. 12 Feb 2015 In : Nature Communications. 6, 6352

    Research output: Contribution to journalArticle

  78. Phosphorylation of synaptic vesicle protein 2A at Thr84 by casein kinase 1 family kinases controls the specific retrieval of synaptotagmin-1

    Zhang, N., Gordon, S. L., Fritsch, M. J., Esoof, N., Campbell, D. G., Gourlay, R., Srikannathasan, V., Macartney, T., Peggie, M., van Aalten, D. M. F., Cousin, M. A. & Alessi, D. R. 11 Feb 2015 In : Journal of Neuroscience. 35, 6, p. 2492-2507 16 p.

    Research output: Contribution to journalArticle

  79. Superficial cortical landmarks for localization of the hippocampus: Application for temporal lobectomy and amygdalohippocampectomy

    Tubbs, R. S., Loukas, M., Barbaro, N. M. & Cohen-Gadol, A. A. 3 Feb 2015 In : Surgical Neurology International. 6, 4 p., 16

    Research output: Contribution to journalArticle

  80. USP45 deubiquitylase controls ERCC1-XPF endonuclease-mediated DNA damage responses

    Perez-Oliva, A. B., Lachaud, C., Szyniarowski, P., Muñoz, I., Macartney, T., Hickson, I., Rouse, J. & Alessi, D. R. 3 Feb 2015 In : EMBO Journal. 34, 3, p. 326-343 18 p.

    Research output: Contribution to journalArticle

  81. Combined hereditary and somatic mutations of replication error repair genes result in rapid onset of ultra-hypermutated cancers

    Shlien, A. , Campbell, B. B. , De Borja, R. , Alexandrov, L. B. , Merico, D. , Wedge, D. , Van Loo, P. , Tarpey, P. S. , Coupland, P. , Behjati, S. , Pollett, A. , Lipman, T. , Heidari, A. , Deshmukh, S. , Avitzur, N. , Meier, B. , Gerstung, M. , Hong, Y. , Merino, D. M. , Ramakrishna, M. & 42 others Remke, M., Arnold, R., Panigrahi, G. B., Thakkar, N. P., Hodel, K. P., Henninger, E. E., Göksenin, A. Y., Bakry, D., Charames, G. S., Druker, H., Lerner-Ellis, J., Mistry, M., Dvir, R., Grant, R., Elhasid, R., Farah, R., Taylor, G. P., Nathan, P. C., Alexander, S., Ben-Shachar, S., Ling, S. C., Gallinger, S., Constantini, S., Dirks, P., Huang, A., Scherer, S. W., Grundy, R. G., Durno, C., Aronson, M., Gartner, A., Meyn, M. S., Taylor, M. D., Pursell, Z. F., Pearson, C. E., Malkin, D., Futreal, P. A., Stratton, M. R., Bouffet, E., Hawkins, C., Campbell, P. J., Tabori, U. & for the Biallelic Mismatch Repair Deficiency Consortium 2 Feb 2015 In : Nature Genetics. 47, 3, p. 257-262 6 p.

    Research output: Contribution to journalLetter

  82. Application of a novel regulatable Cre recombinase system to define the role of liver and gut metabolism in drug oral bioavailability

    Henderson, C. J., McLaughlin, L. A., Osuna-Cabello, M., Taylor, M., Gilbert, I., McLaren, A. W. & Wolf, C. R. 1 Feb 2015 In : Biochemical Journal. 465, 3, p. 479-488 10 p.

    Research output: Contribution to journalArticle

  83. Symbiotic diversity, specificity and distribution of rhizobia in native legumes of the core cape subregion (South Africa)

    Lemaire, B., Dlodlo, O., Chimphango, S., Stirton, C., Schrire, B., Boatwright, J. S., Honnay, O., Smets, E., Sprent, J., James, E. K. & Muasya, A. M. 1 Feb 2015 In : FEMS Microbiology Ecology. 91, 2, 17 p.

    Research output: Contribution to journalArticle

  84. Alignment of an acoustic manipulation device with cepstral analysis of electronic impedance data

    Hughes, D. A., Qiu, Y., Démoré, C., Weijer, C. J. & Cochran, S. Feb 2015 In : Ultrasonics. 56, p. 172-177 6 p.

    Research output: Contribution to journalArticle

  85. Evolutionary relationships among barley and Arabidopsis core circadian clock and clock-associated genes

    Calixto, C. P. G., Waugh, R. & Brown, J. W. S. Feb 2015 In : Journal of Molecular Evolution. 80, 2, p. 108-119 12 p.

    Research output: Contribution to journalArticle

  86. Functionally distinct groups of inherited PTEN mutations in autism and tumour syndromes

    Spinelli, L., Black, F. M., Berg, J. N., Eickholt, B. J. & Leslie, N. R. Feb 2015 In : Journal of Medical Genetics. 52, 2, p. 128-134 7 p.

    Research output: Contribution to journalArticle

  87. HIF-1α restricts NF-κB-dependent gene expression to control innate immunity signals

    Bandarra, D., Biddlestone, J., Mudie, S., Müller, H. -A. J. & Rocha, S. Feb 2015 In : Disease Models & Mechanisms. 8, 2, p. 169-181 13 p.

    Research output: Contribution to journalArticle

  88. Methotrexate promotes glucose uptake and lipid oxidation in skeletal muscle via AMPK activation

    Pirkmajer, S., Kulkarni, S. S., Tom, R. Z., Ross, F. A., Hawley, S. A., Hardie, D. G., Zierath, J. R. & Chibalin, A. V. Feb 2015 In : Diabetes. 64, 2, p. 360-369 10 p.

    Research output: Contribution to journalArticle

  89. p38MAPK/MK2-mediated phosphorylation of RBM7 regulates the human nuclear exosome targeting complex

    Tiedje, C., Lubas, M., Tehrani, M., Menon, M. B., Ronkina, N., Rousseau, S., Cohen, P., Kotlyarov, A. & Gaestel, M. Feb 2015 In : RNA: a Publication of the RNA Society. 21, 2, p. 262-278 17 p.

    Research output: Contribution to journalArticle

  90. The Joint European Compound Library: boosting precompetitive research

    Besnard, J., Jones, P. S., Hopkins, A. L. & Pannifer, A. D. Feb 2015 In : Drug Discovery Today. 20, 2, p. 181-186 6 p.

    Research output: Contribution to journalArticle

  91. Modified ribosome profiling reveals high abundance of ribosome protected mRNA fragments derived from 3′ untranslated regions

    Miettinen, T. P. & Björklund, M. 30 Jan 2015 In : Nucleic Acids Research. 43, 2, p. 1019-1034 16 p.

    Research output: Contribution to journalArticle

  92. Mitogen and stress-activated kinases 1/2 regulate ischemia-induced hippocampal progenitor cell proliferation and neurogenesis

    Karelina, K., Liu, Y., Alzate-Correa, D., Wheaton, K. L., Hoyt, K. R., Arthur, J. S. C. & Obrietan, K. 29 Jan 2015 In : Neuroscience. 285, p. 292-302 11 p.

    Research output: Contribution to journalArticle

  93. TrypanoCyc: a community-led biochemical pathways database for Trypanosoma brucei

    Fairlamb, A. H. , Ferguson, M. A. J. & 39 others Shameer, S., Logan-Klumpler, F. J., Vinson, F., Cottret, L., Merlet, B., Achcar, F., Boshart, M., Berriman, M., Breitling, R., Bringaud, F., Bütikofer, P., Cattanach, A. M., Bannerman-Chukualim, B., Creek, D. J., Crouch, K., de Koning, H. P., Denise, H., Ebikeme, C., Ginger, M. L., Hertz-Fowler, C., Kerkhoven, E. J., Mäser, P., Michels, P. A. M., Nayak, A., Nes, D. W., Nolan, D. P., Olsen, C., Silva-Franco, F., Smith, T. K., Taylor, M. C., Tielens, A. G. M., Urbaniak, M. D., van Hellemond, J. J., Vincent, I. M., Wilkinson, S. R., Wyllie, S., Opperdoes, F. R., Barrett, M. P. & Jourdan, F. 28 Jan 2015 In : Nucleic Acids Research. 43, D1, p. D637-D644 8 p.

    Research output: Contribution to journalArticle

  94. RAB1A promotes Vaccinia virus replication by facilitating the production of intracellular enveloped virions

    Pechenick Jowers, T., Featherstone, R. J., Reynolds, D. K., Brown, H. K., James, J., Prescott, A., Haga, I. R. & Beard, P. M. 15 Jan 2015 In : Virology. 475, p. 66-73 8 p.

    Research output: Contribution to journalArticle

  95. The clinically approved drugs dasatinib and bosutinib induce anti-inflammatory macrophages by inhibiting the salt-inducible kinases

    Ozanne, J., Prescott, A. R. & Clark, K. 15 Jan 2015 In : Biochemical Journal. 465, 2, p. 271-279 9 p.

    Research output: Contribution to journalArticle

  96. Phosphorylation of Elp1 by Hrr25 is required for Elongator-dependent tRNA modification in yeast

    Abdel-Fattah, W., Jablonowski, D., Di Santo, R., Thüring, K. L., Scheidt, V., Hammermeister, A., ten Have, S., Helm, M., Schaffrath, R. & Stark, M. J. R. 8 Jan 2015 In : PLoS Genetics. 11, 1, 16 p., e1004931

    Research output: Contribution to journalArticle

  97. Proteomic analysis of the response to cell cycle arrests in human myeloid leukemia cells

    Ly, T., Endo, A. & Lamond, A. I. 2 Jan 2015 In : eLife. 2015, 4, 15 p., e04534

    Research output: Contribution to journalArticle

  98. Anatomical variations and neurosurgical significance of Liliequist's membrane

    Mortazavi, M. M., Rizq, F., Harmon, O., Adeeb, N., Gorjian, M., Hose, N., Modammadirad, E., Taghavi, P., Rocque, B. G. & Tubbs, R. S. Jan 2015 In : Child's Nervous System. 31, 1, p. 15-28 14 p.

    Research output: Contribution to journalArticle

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