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  1. Insights into Diphthamide, key Diphtheria Toxin effector

    Abdel-Fattah, W., Scheidt, V., Uthman, S., Stark, M. J. R. & Schaffrath, R. 3-May-2013 5, 5, p. 958-968, 11 p.

    Research output: Contribution to journal › Article

  2. The P-body component USP52/PAN2 is a novel regulator of HIF1A mRNA stability

    Bett, J. S., Ibrahim, A. F. M., Garg, A. K., Kelly, V., Pedrioli, P., Rocha, S. & Hay, R. T. 15-Apr-2013 In : Biochemical Journal. 451, 2, p. 185-194, 10 p., BJ20130026

    Research output: Contribution to journal › Article

  3. Correlative imaging of fluorescent proteins in resin-embedded plant material

    Bell, K., Mitchell, S., Paultre, D., Posch, M. & Oparka, K. Apr-2013 In : Plant Physiology. 161, 4, p. 1595-1603, 9 p.

    Research output: Contribution to journal › Article

  4. Decoding the SUMO signal

    Hay, R. T. Apr-2013 In : Biochemical Society Transactions. 41, 2, p. 463-473, 11 p.

    Research output: Contribution to journal › Article

  5. Esperanto for histones: CENP-A, not CenH3, is the centromeric histone H3 variant

    Earnshaw, W. C. , Allshire, R. C. , Black, B. E. , Bloom, K. , Salmon, E. D. , Brinkley, B. R. , Brown, W. , Cheeseman, I. M. , Choo, K. H. A. , Copenhaver, G. P. , DeLuca, J. G. , Luger, K. , Desai, A. , Oegema, K. , Cleveland, D. W. , Diekmann, S. , Erhardt, S. , Fitzgerald-Hayes, M. , Foltz, D. , Fukagawa, T. & 37 others Gassmann, R., Maiato, H., Gerlich, D. W., Glover, D. M., Gorbsky, G. J., Harrison, S. C., Heun, P., Hirota, T., Jansen, L. E. T., Karpen, G., Kops, G. J. P. L., Lampson, M. A., Lens, S. M., Losada, A., Maddox, P. S., Margolis, R. L., Masumoto, H., McAinsh, A. D., Mellone, B. G., O'Neill, R. J., Meraldi, P., Musacchio, A., Scott, K. C., Sullivan, B. A., Straight, A. F., Stukenberg, P. T., Sullivan, K. F., Sunkel, C. E., Swedlow, J. R., Walczak, C. E., Warburton, P. E., Westermann, S., Willard, H. F., Wordeman, L., Yanagida, M., Yen, T. J. & Yoda, K. Apr-2013 In : Chromosome Research. 21, 2, p. 101-106, 6 p.

    Research output: Contribution to journal › Article

  6. Topoisomerase IIα promotes activation of RNA polymerase i transcription by facilitating pre-initiation complex formation

    Ray, S., Panova, T., Miller, G., Volkov, A., Porter, A. C. G., Russell, J., Panov, K. I. & Zomerdijk, J. C. B. M. 19-Mar-2013 In : Nature Communications. 4, 1598

    Research output: Contribution to journal › Article

  7. Identification and functional characterization of FMN2: a regulator of the cyclin-dependent kinase Inhibitor p21

    Yamada, K., Ono, M., Perkins, N. D., Rocha, S. & Lamond, A. I. Mar-2013 In : Molecular Cell. 49, 5, p. 922-933, 12 p.

    Research output: Contribution to journal › Article

  8. DNA-binding regulates site-specific ubiquitination of IRF-1

    Landré, V., Pion, E., Narayan, V., Xirodimas, D. P. & Ball, K. L. 1-Feb-2013 In : Biochemical Journal. 449, 3, p. 707-717, 11 p.

    Research output: Contribution to journal › Article

  9. A sweet TET-a-tete-synergy of TET proteins and O-GlcNAc transferase in transcription

    Mariappa, D., Pathak, S. & van Aalten, D. M. F. 2013 In : EMBO Journal. 32, 5, p. 612-613, 2 p.

    Research output: Contribution to journal › Editorial

  10. Germ cell apoptosis and DNA damage responses

    Bailly, A. & Gartner, A. 2013 Germ Cell Development in C. elegans. Schedl, T. (ed.). New York: Springer, Vol. 757, p. 249-276 28 p. (Advances in Experimental Medicine and Biology).

    Research output: Chapter in Book/Report/Conference proceeding › Other chapter contribution

  11. TfR1 interacts with the IKK complex and is involved in IKK-NF-kappaB signalling

    Kenneth, N. S., Mudie, S., Naron, S. & Rocha, S. 2013 In : Biochemical Journal. 449, p. 275-284

    Research output: Contribution to journal › Article

  12. The amidation step of Diphthamide biosynthesis in yeast requires DPH6, a gene identified through mining the DPH1-DPH5 interaction network

    Uthman, S., Baer, C., Scheidt, V., Liu, S., Ten Have, S., Giorgini, F., Stark, M. J. R. & Schaffrath, R. 2013 In : PLoS Genetics. 9, 2, e1003334

    Research output: Contribution to journal › Article

  13. Heterologous SUMO-2/3-Ubiquitin Chains Optimize IκBα Degradation and NF-κB Activity

    Aillet, F., Lopitz-Otsoa, F., Egaña, I., Hjerpe, R., Fraser, P., Hay, R. T., Rodriguez, M. S. & Lang, V. 20-Dec-2012 In : PLoS ONE. 7, 12, e51672

    Research output: Contribution to journal › Article

  14. Structural plasticity of histones H3–H4 facilitates their allosteric exchange between RbAp48 and ASF1

    Zhang, W., Yyl, M., Ward, R., Sobott, F., Maman, J., Murthy, A., Watson, A., Fedorov, O., Bowman, A., Owen-Hughes, T., El Mkami, H., Murzina, N., Norman, D. G. & Laue, E. 25-Nov-2012 In : Nature Structural & Molecular Biology. 20, 1, p. 29-35

    Research output: Contribution to journal › Article

  15. Dormant Origins, the Licensing Checkpoint, and the Response to Replicative Stresses

    McIntosh, D. & Blow, J. J. Oct-2012 In : Cold spring harbor perspectives in biology. 4, 10, 10 p., 012955

    Research output: Contribution to journal › Article

  16. Family with Sequence Similarity 60A (FAM60A) Protein Is a Cell Cycle-fluctuating Regulator of the SIN3-HDAC1 Histone Deacetylase Complex

    Munoz, I. M., Macartney, T., Sanchez-Pulido, L., Ponting, C. P., Rocha, S. & Rouse, J. 21-Sep-2012 In : Journal of Biological Chemistry. 287, 39, p. 32346-53, 8 p.

    Research output: Contribution to journal › Article

  17. The control of cell energy metabolism by NF-j B transcription factors

    Mauro, C., Leow, S. C., Anso, E., Rocha, S., Thotakura, A. K., Tornatore, L., Moretti, M., De Smaele, E., Beg, A. A., Tergaonkar, V., Chandel, N. S. & Franzoso, G. Sep-2012 In : Immunology. 137, S1, p. 19, 1 p.

    Research output: Contribution to journal › Meeting abstract

  18. Exploiting the MDM2-CK1α protein-protein interface to develop novel biologics that induce UBL-kinase-modification and inhibit cell growth

    Huart, A-S., MacLaine, N. J., Narayan, V. & Hupp, T. R. 20-Aug-2012 In : PLoS ONE. 7, 8, e43391

    Research output: Contribution to journal › Article

  19. ALDH2 mediates 5-nitrofuran activity in multiple species

    Zhou, L., Ishizaki, H., Spitzer, M., Taylor, K. L., Temperley, N. D., Johnson, S. L., Brear, P., Gautier, P., Zeng, Z., Mitchell, A., Narayan, V., McNeil, E. M., Melton, D. W., Smith, T. K., Tyers, M., Westwood, N. J. & Patton, E. E. 27-Jul-2012 In : Chemistry & Biology. 19, 7, p. 883-892, 10 p.

    Research output: Contribution to journal › Article

  20. The human T-lymphotropic virus type 1 tax protein inhibits nonsense-mediated mRNA decay by interacting with INT6/EIF3E and UPF1

    Mocquet, V., Neusiedler, J., Cluet, D., Robin, J-P., Terme, J-M., Dodon, M. D., Morris, C., Jalinot, P., Rende, F., Ciminale, V., Wittmann, J. & Le Hir, H. 1-Jul-2012 In : Journal of Virology. 86, 14, p. 7530-7543, 14 p.

    Research output: Contribution to journal › Article

  21. Influence of the nuclear membrane, active transport, and cell shape on the Hes1 and p53-Mdm2 pathways: insights from spatio-temporal modelling

    Sturrock, M., Terry, A. J., Xirodimas, D. P., Thompson, A. M. & Chaplain, M. A. J. Jul-2012 In : Bulletin of Mathematical Biology. 74, 7, p. 1531-1579, 49 p.

    Research output: Contribution to journal › Article

  22. Cnn1 inhibits the interactions between the KMN complexes of the yeast kinetochore

    Bock, L. J., Pagliuca, C., Alfieri, C., Golfieri, C., Dal Maschio, M., De Wulf, P., Kobayashi, N., Oku, Y., Tanaka, T. U., Grove, R. A., Shrestha, K., Hazbun, T. R., Oldani, A. & Bermejo, R. 1-Jun-2012 In : Nature Cell Biology. 14, 6, p. 614-624, 11 p.

    Research output: Contribution to journal › Article

  23. SUMO-targeted ubiquitin E3 ligase RNF4 is required for the response of human cells to DNA damage

    Yin, Y., Seifert, A., Chua, J. S., Maure, J-F., Golebiowski, F. & Hay, R. T. 1-Jun-2012 In : Genes & Development. 26, 11, p. 1196-1208, 13 p.

    Research output: Contribution to journal › Article

  24. Preparation and use of Xenopus egg extracts to study DNA replication and chromatin associated proteins

    Gillespie, P. J., Gambus, A. & Blow, J. J. Jun-2012 In : Methods. 57, 2, p. 203-13, 11 p.

    Research output: Contribution to journal › Article

  25. Quantitative proteomic analysis of yeast DNA replication proteins

    Kubota, T., Stead, D. A., Hiraga, S., ten Have, S. & Donaldson, A. D. Jun-2012 In : Methods (San Diego, Calif.). 57, 2, p. 196-202, 7 p.

    Research output: Contribution to journal › Article

  26. Re-replication induced by geminin depletion occurs from G2 and is enhanced by checkpoint activation

    Klotz-Noack, K., McIntosh, D., Schurch, N., Pratt, N. & Blow, J. J. 15-May-2012 In : Journal of Cell Science. 125, 10, p. 2436-2445, 10 p.

    Research output: Contribution to journal › Article

  27. A quantitative proteomic analysis of lung epithelial (A549) cells infected with 2009 pandemic influenza A virus using stable isotope labelling with amino acids in cell culture

    Dove, B. K., Surtees, R., Bean, T. J. H., Munday, D., Wise, H. M., Digard, P., Carroll, M. W., Ajuh, P., Barr, J. N. & Hiscox, J. A. May-2012 In : Proteomics. 12, 9, p. 1431-1436, 6 p.

    Research output: Contribution to journal › Article

  28. The p53 isoforms are differentially modified by Mdm2

    Camus, S., Menendez, S., Fernandes, K., Kua, N., Liu, G., Xirodimas, D. P., Lane, D. P. & Bourdon, J-C. 15-Apr-2012 In : Cell Cycle. 11, 8, p. 1646-1655, 10 p.

    Research output: Contribution to journal › Article

  29. Human box C/D snoRNA processing conservation across multiple cell types

    Scott, M. S., Ono, M., Yamada, K., Endo, A., Barton, G. J. & Lamond, A. I. Apr-2012 In : Nucleic Acids Research. 40, 8, p. 3676-3688, 13 p.

    Research output: Contribution to journal › Article

  30. Micrococcal Nuclease Does Not Substantially Bias Nucleosome Mapping

    Allan, J., Fraser, R. M., Owen-Hughes, T. & Keszenman-Pereyra, D. 30-Mar-2012 In : Journal of Molecular Biology. 417, 3, p. 152-164, 13 p.

    Research output: Contribution to journal › Article

  31. Diphtheria disease and genes involved in formation of diphthamide, key effector of the diphtheria toxin

    Uthman, S., Liu, S., Giorgini, F., Stark, M. J. R., Costanzo, M. & Schaffrath, R. 21-Mar-2012 Insight and Control of Infectious Disease in Global Scenario . Roy, P. K. (ed.). Croatia: In Tech - Open Access Publisher, p. 333-357 25 p.

    Research output: Chapter in Book/Report/Conference proceeding › Chapter

  32. The ubiquitin E1 enzyme Ube1 mediates NEDD8 activation under diverse stress conditions

    Leidecker, O., Matic, I., Mahata, B., Pion, E. & Xirodimas, D. P. 15-Mar-2012 In : Cell Cycle. 11, 6, p. 1142-1150, 9 p.

    Research output: Contribution to journal › Article

  33. Polypyrimidine Tract Binding Protein (hnRNP I) Is Possibly a Conserved Modulator of miRNA-Mediated Gene Regulation

    Engels, B., Jannot, G., Remenyi, J., Simard, M. J. & Hutvagner, G. 9-Mar-2012 In : PLoS ONE. 7, 3, p. -, 11 p., e33144

    Research output: Contribution to journal › Article

  34. A quantitative spatial proteomics analysis of proteome turnover in human cells

    Boisvert, F-M., Ahmad, Y., Gierlinski, M., Charrière, F., Lamont, D., Scott, M., Barton, G. & Lamond, A. I. 1-Mar-2012 In : Molecular & Cellular Proteomics. 11, 3

    Research output: Contribution to journal › Article

  35. Advancing cell biology through proteomics in space and time (PROSPECTS)

    Lamond, A. I., Uhlen, M., Horning, S., Makarov, A., Robinson, C. V., Serrano, L., Hartl, F. U., Baumeister, W., Werenskiold, A. K., Andersen, J. S., Vorm, O., Linial, M., Aebersold, R. & Mann, M. 1-Mar-2012 In : Molecular & Cellular Proteomics. 11, 3

    Research output: Contribution to journal › Article

  36. Characterization of MRFAP1 turnover and interactions downstream of the NEDD8 pathway

    Larance, M., Kirkwood, K. J., Xirodimas, D. P., Lundberg, E., Uhlen, M. & Lamond, A. I. 1-Mar-2012 In : Molecular & Cellular Proteomics. 11, 3

    Research output: Contribution to journal › Article

  37. OMERO: flexible, model-driven data management for experimental biology

    Allan, C. , Burel, J-M. , Moore, J. , Blackburn, C. , Linkert, M. , Loynton, S. , MacDonald, D. , Moore, W. J. , Neves, C. , Patterson, A. , Porter, M. , Tarkowska, A. , Loranger, B. , Avondo, J. , Lagerstedt, I. , Lianas, L. , Leo, S. , Hands, K. , Hay, R. T. , Patwardhan, A. & 4 others Best, C., Kleywegt, G. J., Zanetti, G. & Swedlow, J. R. 1-Mar-2012 In : Nature Methods. 9, 3, p. 245-253, 9 p.

    Research output: Contribution to journal › Article

  38. Systematic analysis of protein pools, isoforms, and modifications affecting turnover and subcellular localization

    Ahmad, Y., Boisvert, F-M., Lundberg, E., Uhlen, M. & Lamond, A. I. 1-Mar-2012 In : Molecular & Cellular Proteomics. 11, 3

    Research output: Contribution to journal › Article

  39. Tratamiento exitoso de la necrosis isquémica del glande poscircuncisión con oxígeno hiperbárico y pentoxifilina intravenosa

    Elemen, L., Akay, A., Topçu, K. & Gürcan, N. I. 1-Mar-2012 In : Actas Urologicas Espanolas. 36, 3, p. 200-201, 2 p.

    Research output: Contribution to journal › Article

  40. Evidence that CED-9/Bcl2 and CED-4/Apaf-1 localization is not consistent with the current model for C. elegans apoptosis induction

    Pourkarimi, E., Greiss, S. & Gartner, A. Mar-2012 In : Cell Death & Differentiation. 19, 3, p. 406-415, 10 p.

    Research output: Contribution to journal › Article

  41. Raf1 is a DCAF for the Rik1 DDB1-like protein and has separable roles in siRNA generation and chromatin modification

    Buscaino, A., White, S. A., Houston, D. R., Lejeune, E., Simmer, F., de Lima Alves, F., Diyora, P. T., Bayne, E. H., Rappsilber, J., Allshire, R. C. & Urano, T. 1-Feb-2012 In : PLoS Genetics. 8, 2, e1002499

    Research output: Contribution to journal › Article

  42. Scale integration: the structure and dynamics of macromolecular assemblies, cells and tissues

    Swedlow, J. & Danuser, G. 1-Feb-2012 In : Current Opinion in Cell Biology. 24, 1, p. 1-3, 3 p.

    Research output: Contribution to journal › Article

  43. The dynamics of replication licensing in live Caenorhabditis elegans embryos

    Sonneville, R., Querenet, M., Craig, A., Gartner, A. & Blow, J. J. 23-Jan-2012 In : Journal of Cell Biology. 196, 2, p. 233-246, 14 p.

    Research output: Contribution to journal › Article

  44. The shark in us: Learning about the evolution of the p53 regulatory circuit

    Rutkowski, R. & Gartner, A. 15-Jan-2012 In : Cell Cycle. 11, 2, p. 216-217, 2 p.

    Research output: Contribution to journal › Comment/debate

  45. Detection and quantitation of SUMO chains by mass spectrometry

    Matic, I. & Hay, R. T. 1-Jan-2012 Methods in Molecular Biology. Vol. 832, p. 239-247 9 p.

    Research output: Chapter in Book/Report/Conference proceeding › Other chapter contribution

  46. Innovation in biological microscopy: current status and future directions

    Swedlow, J. R. 1-Jan-2012 In : BioEssays.

    Research output: Contribution to journal › Article

  47. Making sense of transcribing chromatin

    Owen-Hughes, T. & Gkikopoulos, T. 1-Jan-2012 In : Current Opinion in Cell Biology.

    Research output: Contribution to journal › Article

  48. Methods for studying the DNA damage response in the Caenorhabdatis elegans germ line

    Craig, A. L., Moser, S. C., Bailly, A. . & Gartner, A. 1-Jan-2012 In : Methods in Cell Biology. 107, p. 321-352, 32 p.

    Research output: Contribution to journal › Article

  49. Modulation of activation-associated host cell gene expression by the apicomplexan parasite Theileria annulata

    Durrani, Z., Weir, W., Pillai, S., Shiels, B. & Kinnaird, J. 1-Jan-2012 In : Cellular Microbiology.

    Research output: Contribution to journal › Article

  50. Software tools, data structures, and interfaces for microscope imaging

    Stuurman, N. & Swedlow, J. R. 1-Jan-2012 In : Cold Spring Harbor Protocols. 7, 1, p. 50-61, 12 p.

    Research output: Contribution to journal › Article

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