Discovery - University of Dundee - Online Publications

Library & Learning Centre

Plant Sciences

  1. Plant-Microbiota Interactions as a Driver of the Mineral Turnover in the Rhizosphere

    Alegria Terrazas, R., Giles, C., Paterson, E., Robertson-Albertyn, S., Cesco, S., Mimmo, T., Pii, Y. & Bulgarelli, D. 19 Apr 2016 Advances in Applied Microbiology.

    Research output: Chapter in Book/Report/Conference proceedingChapter (peer-reviewed)

  2. A Phytophthora infestans RXLR effector targets plant PP1c isoforms that promote late blight disease

    Boevink, P. C., Wang, X., McLellan, H., He, Q., Naqvi, S., Armstrong, M. R., Zhang, W., Hein, I., Gilroy, E. M., Tian, Z. & Birch, P. R. J. 29 Jan 2016 In : Nature Communications. 7, 10311

    Research output: Contribution to journalArticle

  3. Pluses and minuses of ammonium and nitrate uptake and assimilation by phytoplankton and implications for productivity and community composition, with emphasis on nitrogen-enriched conditions

    Glibert, P. M., Wilkerson, F. P., Dugdale, R. C., Raven, J. A., Dupont, C. L., Leavitt, P. R., Parker, A. E., Burkholder, J. M. & Kana, T. M. Jan 2016 In : Limnology and Oceanography. 61, 1, p. 165-197 33 p., 10203

    Research output: Contribution to journalArticle

  4. The ins and outs of CO2

    Raven, J. A. & Beardall, J. Jan 2016 In : Journal of Experimental Botany. 67, 1, p. 1-13 13 p.

    Research output: Contribution to journalArticle

  5. Growth rate hypothesis and efficiency of protein synthesis under different sulphate concentrations in two green algae

    Giordano, M., Palmucci, M. & Raven, J. A. Nov 2015 In : Plant, Cell & Environment. 38, 11, p. 2313-2317 5 p.

    Research output: Contribution to journalArticle

  6. AtRTD - a comprehensive reference transcript dataset resource for accurate quantification of transcript-specific expression in Arabidopsis thaliana

    Zhang, R., Calixto, C. P. G., Tzioutziou, N. A., James, A. B., Simpson, C. G., Guo, W., Marquez, Y., Kalyna, M., Patro, R., Eyras, E., Barta, A., Nimmo, H. G. & Brown, J. W. S. Oct 2015 In : New Phytologist. 208, 1, p. 96-101 6 p.

    Research output: Contribution to journalArticle

  7. DNA entropy reveals a significant difference in complexity between housekeeping and tissue specific gene promoters

    Thomas, D., Finan, C., Newport, M. J. & Jones, S. Oct 2015 In : Computational Biology and Chemistry. 58, p. 19-24 6 p.

    Research output: Contribution to journalArticle

  8. A host KH RNA-binding protein is a susceptibility factor targeted by an RXLR effector to promote late blight disease

    Wang, X., Boevink, P., McLellan, H., Armstrong, M., Bukharova, T., Qin, Z. & Birch, P. R. J. 7 Sep 2015 In : Molecular Plant. 8, 9, p. 1385-1395 11 p.

    Research output: Contribution to journalArticle

  9. Could land-based early photosynthesizing ecosystems have bioengineered the planet in mid-Palaeozoic times?

    Edwards, D., Cherns, L. & Raven, J. A. Sep 2015 In : Palaeontology. 58, 5, p. 803-837 35 p.

    Research output: Contribution to journalArticle

  10. Gas transfer controls carbon limitation during biomass production by marine microalgae

    Tamburic, B., Evenhuis, C. R., Suggett, D. J., Larkum, A. W. D., Raven, J. A. & Ralph, P. J. 24 Aug 2015 In : ChemSusChem. 8, 16, p. 2727-2736 10 p.

    Research output: Contribution to journalArticle

  11. Evolutionary dynamics of the cellulose synthase gene superfamily in grasses

    Schwerdt, J. G., MacKenzie, K., Wright, F., Oehme, D., Wagner, J. M., Harvey, A. J., Shirley, N. J., Burton, R. A., Schreiber, M., Halpin, C., Zimmer, J., Marshall, D. F., Waugh, R. & Fincher, G. B. Jul 2015 In : Plant Physiology. 168, 3, p. 968-983 16 p.

    Research output: Contribution to journalArticle

  12. HORIZONS: Acclimation, adaptation, traits and trade-offs in plankton functional type models: Reconciling terminology for biology and modelling

    Flynn, K. J., St John, M., Raven, J. A., Skibinski, D. O. F., Allen, J. I., Mitra, A. & Hofmann, E. E. Jul 2015 In : Journal of Plankton Research. 37, 4, p. 683-691 9 p.

    Research output: Contribution to journalArticle

  13. Mind the gap-deficits in our knowledge of aspects impacting the bioavailability of phytochemicals and their metabolites-a position paper focussing on carotenoids and polyphenols

    Bohn, T., McDougall, G. J., Alegría, A., Alminger, M., Arrigoni, E., Aura, A-M., Brito, C., Cilla, A., El, S. N., Karakaya, S., Martinez-Cuesta, M. C. & Santos, C. N. Jul 2015 In : Molecular Nutrition & Food Research. 59, 7, p. 1307-1323 17 p.

    Research output: Contribution to journalArticle

  14. Nuclear processes associated with plant immunity and pathogen susceptibility

    Motion, G. B., Marques Monteiro Amaro, T. M., Kulagina, N. & Huitema, E. Jul 2015 In : Briefings in Functional Genomics. 14, 4, p. 243-252 10 p.

    Research output: Contribution to journalArticle

  15. Surface flux patterns on planets in circumbinary systems and potential for photosynthesis

    Forgan, D. H., Mead, A., Cockell, C. S. & Raven, J. A. Jul 2015 In : International Journal of Astrobiology. 14, 3, p. 465-478 14 p.

    Research output: Contribution to journalArticle

  16. Nitrogen deficiency in barley (Hordeum vulgare) seedlings induces molecular and metabolic adjustments that trigger aphid resistance

    Comadira, G., Rasool, B., Karpinska, B., Morris, J., Verrall, S. R., Hedley, P. E., Foyer, C. H. & Hancock, R. D. 12 Jun 2015 In : Journal of Experimental Botany. 66, 12, p. 3639-3655 17 p.

    Research output: Contribution to journalArticle

  17. U-box E3 ubiquitin ligase PUB17 acts in the nucleus to promote specific immune pathways triggered by Phytophthora infestans

    He, Q., McLellan, H., Boevink, P. C., Sadanandom, A., Xie, C., Birch, P. R. J. & Tian, Z. Jun 2015 In : Journal of Experimental Botany. 66, 11, p. 3189-3199 11 p.

    Research output: Contribution to journalArticle

  18. Characterization of Arabidopsis transcriptional responses to different aphid species reveals genes that contribute to host susceptibility and non-host resistance

    Jaouannet, M., Morris, J. A., Hedley, P. E. & Bos, J. I. B. 20 May 2015 In : PLoS Pathogens. 11, 5, 26 p., e1004918

    Research output: Contribution to journalArticle

  19. Barley: a translational model for adaptation to climate change

    Dawson, I. K., Russell, J., Powell, W., Steffenson, B., Thomas, W. T. B. & Waugh, R. 1 May 2015 In : New Phytologist. 206, 3, p. 913-931 19 p.

    Research output: Contribution to journalArticle

  20. In search of future earths: assessing the possibility of finding Earth analogues in the later stages of their habitable lifetimes

    O'Malley-James, J. T., Greaves, J. S., Raven, J. A. & Cockell, C. S. May 2015 In : Astrobiology. 15, 5, p. 400-411 12 p.

    Research output: Contribution to journalArticle

  21. Optimising ketocarotenoid production in potato tubers: Effect of genetic background, transgene combinations and environment

    Campbell, R., Morris, W. L., Mortimer, C. L., Misawa, N., Ducreux, L. J. M., Morris, J. A., Hedley, P. E., Fraser, P. D. & Taylor, M. A. May 2015 In : Plant Science. 234, p. 27-37 11 p.

    Research output: Contribution to journalArticle

  22. The Top 10 oomycete pathogens in molecular plant pathology

    Kamoun, S. , Furzer, O. , Jones, J. D. G. , Judelson, H. S. , Ali, G. S. , Dalio, R. J. D. , Roy, S. G. , Schena, L. , Zambounis, A. , Panabières, F. , Cahill, D. , Ruocco, M. , Figueiredo, A. , Chen, X. R. , Hulvey, J. , Stam, R. , Lamour, K. , Gijzen, M. , Tyler, B. M. & 15 others Grünwald, N. J., Mukhtar, M. S., Tomé, D. F. A., Tör, M., Van Den Ackerveken, G., McDowell, J., Daayf, F., Fry, W. E., Lindqvist-Kreuze, H., Meijer, H. J. G., Petre, B., Ristaino, J., Yoshida, K., Birch, P. R. J. & Govers, F. May 2015 In : Molecular Plant Pathology. 16, 4, p. 413-434 22 p.

    Research output: Contribution to journalArticle

  23. Editorial on plants as alternative hosts for human and animal pathogens

    Holden, N. J., Jackson, R. W. & Schikora, A. 30 Apr 2015 In : Frontiers in Microbiology. 6, 2 p., 397

    Research output: Contribution to journalEditorial

  24. Modelling the genetic architecture of flowering time control in barley through nested association mapping

    Maurer, A., Draba, V., Jiang, Y., Schnaithmann, F., Sharma, R., Schumann, E., Kilian, B., Reif, J. C. & Pillen, K. 12 Apr 2015 In : BMC Genomics. 16, 12 p., 290

    Research output: Contribution to journalArticle

  25. Compartmentation of defensive compound synthesis in a red alga

    Raven, J. A. 1 Apr 2015 In : Journal of Applied Phycology. 51, 2, p. 222-224 3 p.

    Research output: Contribution to journalArticle

  26. Phenolic compounds in blackcurrant (Ribes nigrum L.) leaves relative to leaf position and harvest date

    Vagiri, M., Conner, S., Stewart, D., Andersson, S. C., Verrall, S., Johansson, E. & Rumpunen, K. 1 Apr 2015 In : Food Chemistry. 172, p. 135-142 8 p.

    Research output: Contribution to journalArticle

  27. Improving intercropping: a synthesis of research in agronomy, plant physiology and ecology

    Brooker, R. W. , Bennett, A. E. , Cong, W. F. , Daniell, T. J. , George, T. S. , Hallett, P. D. , Hawes, C. , Iannetta, P. P. M. , Jones, H. G. , Karley, A. J. , Li, L. , Mckenzie, B. M. , Pakeman, R. J. , Paterson, E. , Schöb, C. , Shen, J. , Squire, G. , Watson, C. A. , Zhang, C. & 3 others Zhang, F., Zhang, J. & White, P. J. Apr 2015 In : New Phytologist. 206, 1, p. 107-117 11 p.

    Research output: Contribution to journalArticle

  28. Photosynthesis in reproductive structures: costs and benefits

    Raven, J. A. & Griffiths, H. Apr 2015 In : Journal of Experimental Botany. 66, 7, p. 1699-1705 7 p.

    Research output: Contribution to journalArticle

  29. Plant lignin content altered by soil microbial community

    Bennett, A. E., Grussu, D., Kam, J., Caul, S. & Halpin, C. Apr 2015 In : New Phytologist. 206, 1, p. 166-174 9 p.

    Research output: Contribution to journalArticle

  30. Structure and function of the bacterial root microbiota in wild and domesticated barley

    Bulgarelli, D., Garrido-Oter, R., Münch, P. C., Weiman, A., Dröge, J., Pan, Y., McHardy, A. C. & Schulze-Lefert, P. 11 Mar 2015 In : Cell Host & Microbe. 17, 3, p. 392-403 12 p.

    Research output: Contribution to journalArticle

  31. Alternative splicing of mini-exons in the Arabidopsis leaf rust receptor-like kinase LRK10 genes affects subcellular localisation

    Shin, K. H., Yang, S. H., Lee, J. Y., Lim, C. W., Lee, S. C., Brown, J. W. S. & Kim, S. H. Mar 2015 In : Plant Cell Reports. 34, 3, p. 495-505 11 p.

    Research output: Contribution to journalArticle

  32. Current perspective on protein S-acylation in plants: more than just a fatty anchor?

    Hurst, C. H. & Hemsley, P. A. Mar 2015 In : Journal of Experimental Botany. 66, 6, p. 1599-1606 8 p.

    Research output: Contribution to journalArticle

  33. The plant microbiome at work

    Schlaeppi, K. & Bulgarelli, D. Mar 2015 In : Molecular Plant - Microbe Interactions. 28, 3, p. 212-217 6 p.

    Research output: Contribution to journalArticle

  34. Enhanced biofuel production using optimality, pathway modification and waste minimization

    Raven, J. A. & Ralph, P. J. Feb 2015 In : Journal of Applied Phycology. 27, 1, p. 1-31 31 p.

    Research output: Contribution to journalArticle

  35. Evolutionary relationships among barley and Arabidopsis core circadian clock and clock-associated genes

    Calixto, C. P. G., Waugh, R. & Brown, J. W. S. Feb 2015 In : Journal of Molecular Evolution. 80, 2, p. 108-119 12 p.

    Research output: Contribution to journalArticle

  36. Identification and characterization of parasitism genes from the pinewood nematode Bursaphelenchus xylophilus reveals a multi-layered detoxification strategy

    Espada, M., Silva, A. C., Eves-van den Akker, S., Cock, P. J. A., Mota, M. & Jones, J. T. 2015 In : Molecular Plant Pathology. 10 p.

    Research output: Contribution to journalArticle

  37. Plant root associated Bacillus subtilis biofilm formation

    Bissett, E., De Vega Perez, D., Holden, N. & Stanley-Wall, N. R. 2015

    Research output: Contribution to conferencePoster

  38. Structure, function and evolution of the microbiota thriving at the root-soil interface

    Bulgarelli, D. 2015

    Research output: Contribution to conferenceOther

  39. Active water transport in unicellular algae: where, why, and how

    Raven, J. A. & Doblin, M. A. 22 Dec 2014 In : Journal of Experimental Botany. 65, 22, p. 6279-6292 14 p.

    Research output: Contribution to journalArticle

  40. Stopped in its tracks: how λ-cyhalothrin can break the aphid transmission of a potato potyvirus

    Fenton, B., Salter, T., Malloch, G., Begg, G. & Anderson, E. 18 Dec 2014 In : Pest Management Science.

    Research output: Contribution to journalArticle

  41. Progress in understanding the mechanisms and functional importance of protein-membrane interactions in plants

    Hemsley, P. A. Dec 2014 In : New Phytologist. 204, 4, p. 741-743 3 p.

    Research output: Contribution to journalArticle

  42. The zigzag model of plant-microbe interactions: is it time to move on?

    Pritchard, L. & Birch, P. R. J. Dec 2014 In : Molecular Plant Pathology. 15, 9, p. 865-870 6 p.

    Research output: Contribution to journalArticle

  43. Genetic dissection of photoperiod response based on GWAS of pre-anthesis phase duration in spring barley

    Alqudah, A. M., Sharma, R., Pasam, R. K., Graner, A., Kilian, B. & Schnurbusch, T. 24 Nov 2014 In : PLoS ONE. 9, 11, 27 p., e113120

    Research output: Contribution to journalArticle

  44. Molecular effects of resistance elicitors from biological origin and their potential for crop protection

    Wiesel, L., Newton, A. C., Elliott, I., Booty, D., Gilroy, E. M., Birch, P. R. J. & Hein, I. 21 Nov 2014 In : Frontiers in Plant Science. 5, 13 p., 655

    Research output: Contribution to journalArticle

  45. The role of effectors in nonhost resistance to filamentous plant pathogens

    Stam, R., Mantelin, S., McLellan, H. & Thilliez, G. 5 Nov 2014 In : Frontiers in Plant Science. 5, 582

    Research output: Contribution to journalArticle

  46. Detection of the virulent form of AVR3a from Phytophthora infestans following artificial evolution of potato resistance gene R3a

    Chapman, S., Stevens, L. J., Boevink, P. C., Engelhardt, S., Alexander, C. J., Harrower, B., Champouret, N., McGeachy, K., Van Weymers, P. S. M., Chen, X., Birch, P. R. J. & Hein, I. 23 Oct 2014 In : PLoS ONE. 9, 10, 11 p., e110158

    Research output: Contribution to journalArticle

  47. A genome wide association scan for (1,3;1,4)-β-glucan content in the grain of contemporary 2-row Spring and Winter barleys

    Houston, K., Russell, J., Schreiber, M., Halpin, C., Oakey, H., Washington, J. M., Booth, A., Shirley, N., Burton, R. A., Fincher, G. B. & Waugh, R. 17 Oct 2014 In : BMC Genomics. 15, 15 p., 907

    Research output: Contribution to journalArticle

  48. Allelic variation at Fr-H1/Vrn-H1 and Fr-H2 loci is the main determinant of frost tolerance in spring barley

    Tondelli, A., Pagani, D., Ghafoori, I. N., Rahimi, M., Ataei, R., Rizza, F., Flavell, A. J. & Cattivelli, L. 1 Oct 2014 In : Environmental and Experimental Botany. 106, p. 148-155 8 p.

    Research output: Contribution to journalArticle

  49. Beyond nutrition and agriculture policy: collaborating for a food policy

    Stewart, D., Kennedy, A. & Pavel, A. Oct 2014 In : British Journal of Nutrition. 112 , Suppl. 2, p. S65-S74 10 p.

    Research output: Contribution to journalArticle

  50. Construction of a dense SNP map of a highly heterozygous diploid potato population and QTL analysis of tuber shape and eye depth

    Prashar, A., Hornyik, C., Young, V., McLean, K., Sharma, S. K., Dale, M. F. B. & Bryan, G. J. Oct 2014 In : Theoretical and Applied Genetics. 2159-2171, 10, p. 2159-2171 13 p.

    Research output: Contribution to journalArticle

  51. Genome-Tagged Amplification (GTA): a PCR-based method to prepare sample-tagged amplicons from hundreds of individuals for next generation sequencing

    Ho, T., Cardle, L., Xu, X., Bayer, M., Prince, K. S. J., Mutava, R. N., Marshall, D. F. & Syed, N. Oct 2014 In : Molecular Breeding. 34, 3, p. 977-988 12 p.

    Research output: Contribution to journalArticle

  52. Oat agriculture, cultivation and breeding targets: implications for human nutrition and health

    Stewart, D. & McDougall, G. Oct 2014 In : British Journal of Nutrition. 112 , Suppl. 2, p. S50-S57 8 p.

    Research output: Contribution to journalArticle

  53. Photosynthetic potential of planets in 3 : 2 spin-orbit resonances

    Brown, S. P., Mead, A. J., Forgan, D. H., Raven, J. A. & Cockell, C. S. Oct 2014 In : International Journal of Astrobiology. 13, 4, p. 279-289 11 p.

    Research output: Contribution to journalArticle

  54. Identification and characterisation of a hyper-variable apoplastic effector gene family of the potato cyst nematodes

    Eves-van den Akker, S., Lilley, C. J., Jones, J. T. & Urwin, P. E. 25 Sep 2014 In : PLoS Pathogens. 10, 9, 14 p., e1004391

    Research output: Contribution to journalArticle

  55. In silico identification and characterization of conserved plant microRNAs in barley

    Wu, X., Hornyik, C., Bayer, M., Marshall, D., Waugh, R. & Zhang, R. Sep 2014 In : Central European Journal of Biology. 9, 9, p. 841-852 12 p.

    Research output: Contribution to journalArticle

  56. Barley has two peroxisomal ABC transporters with multiple functions in β-oxidation

    Mendiondo, G. M., Medhurst, A., van Roermund, C. W., Zhang, X., Devonshire, J., Scholefield, D., Fernández, . J., Axcell, B., Ramsay, L., Waterham, H. R., Waugh, R., Theodoulou, F. L. & Holdsworth, M. J. Sep 2014 In : Journal of Experimental Botany. 65, 17, p. 4833-4847 15 p.

    Research output: Contribution to journalArticle

  57. Energy costs of carbon dioxide concentrating mechanisms in aquatic organisms

    Raven, J. A., Beardall, J. & Giordano, M. Sep 2014 In : Photosynthesis Research. 121, 2-3, p. 111-124 14 p.

    Research output: Contribution to journalArticle

  58. Sequence diversity in the large subunit of RNA polymerase I contributes to Mefenoxam insensitivity in Phytophthora infestans

    Randall, E., Young, V., Sierotzki, H., Scalliet, G., Birch, P. R. J., Cooke, D. E. L., Csukai, M. & Whisson, S. C. Sep 2014 In : Molecular Plant Pathology. 15, 7, p. 664-676 13 p.

    Research output: Contribution to journalArticle

  59. The low recombining pericentromeric region of barley restricts gene diversity and evolution but not gene expression

    Baker, K., Bayer, M., Cook, N., Dreißig, S., Dhillon, T., Russell, J., Hedley, P. E., Morris, J., Ramsay, L., Colas, I., Waugh, R., Steffenson, B., Milne, I., Stephen, G., Marshall, D. & Flavell, A. J. Sep 2014 In : Plant Journal. 79, 6, p. 981-992 12 p.

    Research output: Contribution to journalArticle

  60. CO2 concentrating mechanisms and environmental change

    Raven, J. A. & Beardall, J. Aug 2014 In : Aquatic Botany. 118, p. 24-37 14 p.

    Research output: Contribution to journalArticle

  61. Helium: visualization of large scale plant pedigrees

    Shaw, P. D., Graham, M., Kennedy, J., Milne, I. & Marshall, D. F. Aug 2014 In : BMC Bioinformatics. 15, 15 p., 259

    Research output: Contribution to journalArticle

  62. Hypersensitive response to Potato virus Y in potato cultivar Sárpo Mira is conferred by the Ny-Smira gene located on the long arm of chromosome IX

    Tomczyńska, I., Jupe, F., Hein, I., Marczewski, W. & Sliwka, J. Aug 2014 In : Molecular Breeding. 34, 2, p. 471-480 10 p.

    Research output: Contribution to journalArticle

  63. Nitrogen and sulfur assimilation in plants and algae

    Giordano, M. & Raven, J. A. Aug 2014 In : Aquatic Botany. 118, p. 45-61 17 p.

    Research output: Contribution to journalArticle

  64. Recognition of an Avr3a homologue plays a major role in mediating nonhost resistance to Phytophthora capsici in Nicotiana species

    Vega-Arreguín, J. C., Jalloh, A., Bos, J. I. & Moffett, P. Aug 2014 In : Molecular Plant - Microbe Interactions. 27, 8, p. 770-780 11 p.

    Research output: Contribution to journalArticle

  65. A chromosome-based draft sequence of the hexaploid bread wheat (Triticum aestivum) genome

    The International Wheat Genome Sequencing Consortium (IWGSC) 18 Jul 2014 In : Science. 345, 6194, 11 p., 1251788

    Research output: Contribution to journalArticle

  66. Algae

    Raven, J. A. & Giordano, M. 7 Jul 2014 In : Current Biology. 24, 13, p. R590-R595 6 p.

    Research output: Contribution to journalArticle

  67. Arabidopsis PTB1 and PTB2 proteins negatively regulate splicing of a mini-exon splicing reporter and affect alternative splicing of endogenous genes differentially

    Simpson, C. G., Lewandowska, D., Liney, M., Davidson, D., Chapman, S., Fuller, J., McNicol, J., Shaw, P. & Brown, J. W. S. Jul 2014 In : New Phytologist. 203, 2, p. 424-436 13 p.

    Research output: Contribution to journalArticle

  68. Flagella interact with ionic plant lipids to mediate adherence of pathogenic Escherichia coli to fresh produce plants

    Rossez, Y., Holmes, A., Wolfson, E. B., Gally, D. L., Mahajan, A., Pedersen, H. L., Willats, W. G. T., Toth, I. K. & Holden, N. J. Jul 2014 In : Environmental Microbiology. 16, 7, p. 2181-2195 15 p.

    Research output: Contribution to journalArticle

  69. Genotypic variation in the ability of landraces and commercial cereal varieties to avoid manganese deficiency in soils with limited manganese availability: is there a role for root-exuded phytases?

    George, T. S., French, A. S., Brown, L. K., Karley, A. J., White, P. J., Ramsay, L. & Daniell, T. J. Jul 2014 In : Physiologia Plantarum. 151, 3, p. 243-256 14 p.

    Research output: Contribution to journalArticle

  70. The future of the northeast Atlantic benthic flora in a high CO2 world

    Brodie, J. , Williamson, C. J. , Smale, D. A. , Kamenos, N. A. , Mieszkowska, N. , Santos, R. , Cunliffe, M. , Steinke, M. , Yesson, C. , Anderson, K. M. , Asnaghi, V. , Brownlee, C. , Burdett, H. L. , Burrows, M. T. , Collins, S. , Donohue, P. J. C. , Harvey, B. , Foggo, A. , Noisette, F. & 7 others Nunes, J., Ragazzola, F., Raven, J. A., Schmidt, D. N., Suggett, D., Teichberg, M. & Hall-Spencer, J. M. Jul 2014 In : Ecology and Evolution. 4, 13, p. 2787-2798 12 p.

    Research output: Contribution to journalArticle

  71. An optimized method for the extraction of bacterial mRNA from plant roots infected with Escherichia coli O157:H7

    Holmes, A., Birse, L., Jackson, R. W. & Holden, N. J. 10 Jun 2014 In : Frontiers in Microbiology. 5, 7 p., 286

    Research output: Contribution to journalArticle

  72. Low levels of ribosomal RNA partly account for the very high photosynthetic phosphorus-use efficiency of Proteaceae species

    Sulpice, R., Ishihara, H., Schlereth, A., Cawthray, G. R., Encke, B., Giavalisco, P., Ivakov, A., Arrivault, S., Jost, R., Krohn, N., Kuo, J., Laliberté, E., Pearse, S. J., Raven, J. A., Scheible, W-R., Teste, F., Veneklaas, E. J., Stitt, M. & Lambers, H. Jun 2014 In : Plant, Cell & Environment. 37, 6, p. 1276-1298 23 p.

    Research output: Contribution to journalArticle

  73. The use of indirect or proxy markers in plant physiology

    Jones, H. G. Jun 2014 In : Plant, Cell & Environment. 37, 6, p. 1270-1272

    Research output: Contribution to journalComment/debate

  74. Field phenotyping of potato to assess root and shoot characteristics associated with drought tolerance

    Wishart, J., George, T. S., Brown, L. K., White, P. J., Ramsay, G., Jones, H. & Gregory, P. J. May 2014 In : Plant and Soil. 378, 1-2, p. 351-363 13 p.

    Research output: Contribution to journalArticle

  75. Improved annotation of 3' untranslated regions and complex loci by combination of strand-specific direct RNA sequencing, RNA-seq and ESTs

    Schurch, N. J., Cole, C., Sherstnev, A., Song, J., Duc, C., Storey, K. G., McLean, W. H. I., Brown, S. J., Simpson, G. G. & Barton, G. J. Apr 2014 In : PLoS ONE. 9, 4, 20 p., e94270

    Research output: Contribution to journalArticle

  76. A neoproterozoic transition in the marine nitrogen cycle

    Sánchez-Baracaldo, P., Ridgwell, A. & Raven, J. A. 17 Mar 2014 In : Current Biology. 24, 6, p. 652-657 6 p.

    Research output: Contribution to journalArticle

  77. Phytophthora infestans RXLR effector PexRD2 interacts with host MAPKKKε to suppress plant immune signaling

    King, S. R. F., McLellan, H., Boevink, P. C., Armstrong, M. R., Bukharov, T., Sukarta, O., Win, J., Kamoun, S., Birch, P. R. J. & Banfield, M. J. Mar 2014 In : Plant Cell. 26, 3, p. 1345-1359 15 p.

    Research output: Contribution to journalArticle

  78. Geographical gradient of the eIF4E alleles conferring resistance to potyviruses in pea (Pisum) germplasm

    Konečná, E., Safářová, D., Navrátil, M., Hanáček, P., Coyne, C., Flavell, A., Vishnyakova, M., Ambrose, M., Redden, R. & Smýkal, P. Mar 2014 In : PLoS ONE. 9, 3, e90394

    Research output: Contribution to journalArticle

  79. Root hair length and rhizosheath mass depend on soil porosity, strength and water content in barley genotypes

    Haling, R. E., Brown, L. K., Bengough, A. G., Valentine, T. A., White, P. J., Young, I. M. & George, T. S. Mar 2014 In : Planta. 239, 3, p. 643-651 9 p.

    Research output: Contribution to journalArticle

  80. In vivo protein-protein interaction studies with BiFC: conditions, cautions, and caveats

    Boevink, P., McLellan, H., Bukharova, T., Engelhardt, S. & Birch, P. 15 Feb 2014 Plant-pathogen interactions: methods and protocols. Birch, P., Jones, J. T. & Bos, J. I. B. (eds.). New York: Humana Press, p. 81-90 10 p. (Methods in Molecular Biology; vol. 1127)

    Research output: Chapter in Book/Report/Conference proceedingChapter (peer-reviewed)

  81. An evaluation of genotyping by sequencing (GBS) to map the Breviaristatum-e (ari-e) locus in cultivated barley

    Liu, H., Bayer, M., Druka, A., Russell, J. R., Hackett, C. A., Poland, J., Ramsay, L., Hedley, P. E. & Waugh, R. 6 Feb 2014 In : BMC Genomics. 15, 11 p., 104

    Research output: Contribution to journalArticle

  82. Physiological, biochemical and molecular responses of the potato (Solanum tuberosum L.) plant to moderately elevated temperature

    Hancock, R. D., Morris, W. L., Ducreux, L. J. M., Morris, J. A., Usman, M., Verrall, S. R., Fuller, J., Simpson, C. G., Zhang, R., Hedley, P. E. & Taylor, M. A. Feb 2014 In : Plant, Cell & Environment. 37, 2, p. 439-450 12 p.

    Research output: Contribution to journalArticle

  83. The Synaptonemal Complex Protein ZYP1 Is Required for Imposition of Meiotic Crossovers in Barley

    Barakate, A., Higgins, J. D., Vivera, S., Stephens, J., Perry, R. M., Ramsay, L., Colas, I., Oakey, H., Waugh, R., Franklin, F. C. H., Armstrong, S. J. & Halpin, C. Feb 2014 In : Plant Cell. 26, 2, p. 729-740 12 p.

    Research output: Contribution to journalArticle

  84. The use of tobacco mosaic virus and cowpea mosaic virus for the production of novel metal nanomaterials

    Love, A. J., Makarov, V., Yaminsky, I., Kalinina, N. O. & Taliansky, M. E. 20 Jan 2014 In : Virology. 449, p. 133-139 7 p.

    Research output: Contribution to journalScientific review

  85. The Arabidopsis Mediator Complex Subunits MED16, MED14, and MED2 Regulate Mediator and RNA Polymerase II Recruitment to CBF-Responsive Cold-Regulated Genes

    Hemsley, P. A., Hurst, C. H., Kaliyadasa, E., Lamb, R., Knight, M. R., De Cothi, E. A., Steele, J. F. & Knight, H. 10 Jan 2014 In : Plant Cell.

    Research output: Contribution to journalArticle

  86. Exploiting barley genetic resources for genomewide association scans (GWAS)

    Waugh, R., Flavell, A. J., Russell, J., Thomas, W. B., Ramsay, L. & Comadran, J. 1 Jan 2014 Genomics of Plant Genetic Resources: Volume 1. Managing, Sequencing and Mining Genetic Resources. Springer Netherlands, p. 237-254 18 p.

    Research output: Chapter in Book/Report/Conference proceedingChapter

  87. Mp10 and Mp42 from the aphid species Myzus persicae trigger plant defenses in Nicotiana benthamiana through different activities

    Rodriguez, P. A., Stam, R., Warbroek, T. & Bos, J. I. B. 1 Jan 2014 In : Molecular Plant - Microbe Interactions. 27, 1, p. 30-39 10 p.

    Research output: Contribution to journalArticle

  88. Phytophthora niederhauserii sp. nov., a polyphagous species associated with ornamentals, fruit trees and native plants in 13 countries

    Abad, Z. G. , Abad, J. A. , Cacciola, S. O. , Pane, A. , Faedda, R. , Moralejo, E. , Pérez-Sierra, A. , Abad-Campos, P. , Alvarez-Bernaola, L. A. , Bakonyi, J. , Józsa, A. , Herrero, M. L. , Burgess, T. I. , Cunnington, J. H. , Smith, I. W. , Balci, Y. , Blomquist, C. , Henricot, B. , Denton, G. & 8 others Spies, C., Mcleod, A., Belbahri, L., Cooke, D., Kageyama, K., Uematsu, S., Kurbetli, I. & Değirmenci, K. 2014 In : Mycologia. 106, 3, p. 431-447 17 p.

    Research output: Contribution to journalArticle

  89. Coilin, the signature protein of Cajal bodies, differentially modulates the interactions of plants with viruses in widely different taxa

    Shaw, J., Love, A. J., Makarova, S. S., Kalinina, N. O., Harrison, B. D. & Taliansky, M. E. 2014 In : Nucleus. 5, 1, p. 579-588 10 p., 28315

    Research output: Contribution to journalArticle

  90. Functionally Redundant RXLR Effectors from Phytophthora infestans Act at Different Steps to Suppress Early flg22-Triggered Immunity

    Zheng, X., McLellan, H., Fraiture, M., Liu, X., Boevink, P. C., Gilroy, E. M., Chen, Y., Kandel, K., Sessa, G., Birch, P. R. J. & Brunner, F. 2014 In : PLoS Pathogens. 10, 4, 17 p., e1004057

    Research output: Contribution to journalArticle

  91. Genetical and comparative genomics of Brassica under altered Ca supply identifies Arabidopsis Ca-transporter orthologs

    Graham, N. S., Hammond, J. P., Lysenko, A., Mayes, S., O Lochlainn, S., Blasco, B., Bowen, H. C., Rawlings, C. J., Rios, J. J., Welham, S., Carion, P. W. C., Dupuy, L. X., King, G. J., White, P. J. & Broadley, M. R. 2014 In : Plant Cell. 26, 7, p. 2818-2830 13 p.

    Research output: Contribution to journalArticle

  92. In search of clean, affordable energy

    Bao, Z., Benson, S. M., Cui, Y., Dionne, J. A., Maher, K., Boerjan, W., Halpin, C., Nelson, R., Nichols, D., Ralph, J. & Ramakrishnan, T. S. 2014 In : Oilfield Review. 26, 1, p. 4-15 12 p.

    Research output: Contribution to journalArticle

  93. Leaf-disc assay based on transient over-expression in Nicotiana benthamiana to allow functional screening of candidate effectors from aphids

    Rodriguez, P. A., Hogenhout, S. A. & Bos, J. I. B. 2014 Plant-pathogen interactions: methods and protocols. Birch, P., Jones, J. T. & Bos, J. I. B. (eds.). Humana Press, p. 137-143 7 p. (Methods in Molecular Biology; vol. 1127)

    Research output: Chapter in Book/Report/Conference proceedingChapter (peer-reviewed)

  94. Long noncoding RNA modulates alternative splicing regulators in Arabidopsis

    Bardou, F., Ariel, F., Simpson, C. G., Romero-Barrios, N., Laporte, P., Balzergue, S., Brown, J. W. S. & Crespi, M. 2014 In : Developmental Cell. 30, 2, p. 166-176 11 p.

    Research output: Contribution to journalArticle

  95. Message ends: RNA 3' processing and flowering time control

    Rataj, K. & Simpson, G. G. 2014 In : Journal of Experimental Botany. 65, 2, p. 353-363 11 p.

    Research output: Contribution to journalArticle

  96. Metabolic effects of elevated temperature on organic acid degradation in ripening Vitis vinifera fruit

    Sweetman, C., Sadras, V. O., Hancock, R. D., Soole, K. L. & Ford, C. M. 2014 In : Journal of Experimental Botany. 65, 20, p. 5975-5988 14 p.

    Research output: Contribution to journalArticle

  97. Photosynthesis in early land plants: adapting to the terrestrial environment

    Raven, J. A. & Edwards, D. 2014 Photosynthesis in bryophytes and early land plants. Hanson , D. T. & Rice, S. K. (eds.). Springer , p. 29-58 30 p. (Advances in photosynthesis and respiration; vol. 37)

    Research output: Chapter in Book/Report/Conference proceedingChapter

  98. Plant immunity in plant-aphid interactions

    Jaouannet, M., Rodriguez, P. A., Thorpe, P., Lenoir, C. J. G., MacLeod, R., Escudero-Martinez, C. & Bos, J. I. B. 2014 In : Frontiers in Plant Science. 5, p. 663 1 p.

    Research output: Contribution to journalArticle

  99. Plants and microclimate: a quantitative approach to environmental plant physiology

    Jones, H. G. 2014 3rd ed. Cambridge: Cambridge University Press. 407 p.

    Research output: Book/ReportBook

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