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  1. Improved annotation of 3' untranslated regions and complex loci by combination of strand-specific direct RNA sequencing, RNA-seq and ESTs

    Schurch, N. J., Cole, C., Sherstnev, A., Song, J., Duc, C., Storey, K. G., McLean, W. H. I., Brown, S. J., Simpson, G. G. & Barton, G. J. 10 Apr 2014 In : PLoS ONE. 9, 4, e94270

    Research output: Contribution to journalArticle

  2. Understanding the genetic control and physiological traits associated with rhizosheath production by barley (Hordeum vulgare)

    George, T. S., Brown, L. K., Ramsay, L., White, P. J., Newton, A. C., Bengough, A. G., Russell, J. & Thomas, W. T. B. 28 Mar 2014 In : New Phytologist.

    Research output: Contribution to journalArticle

  3. Geographical gradient of the eIF4E alleles conferring resistance to potyviruses in pea (Pisum) germplasm

    Konečná, E., Safářová, D., Navrátil, M., Hanáček, P., Coyne, C., Flavell, A., Vishnyakova, M., Ambrose, M., Redden, R. & Smýkal, P. Mar 2014 In : PLoS ONE. 9, 3, e90394

    Research output: Contribution to journalArticle

  4. Message ends: RNA 3' processing and flowering time control

    Rataj, K. & Simpson, G. G. Feb 2014 In : Journal of Experimental Botany. 65, 2, p. 353-363 11 p.

    Research output: Contribution to journalArticle

  5. Physiological, biochemical and molecular responses of the potato (Solanum tuberosum L.) plant to moderately elevated temperature

    Hancock, R. D., Morris, W. L., Ducreux, L. J. M., Morris, J. A., Usman, M., Verrall, S. R., Fuller, J., Simpson, C. G., Zhang, R., Hedley, P. E. & Taylor, M. A. Feb 2014 In : Plant, Cell & Environment. 37, 2, p. 439-450 12 p.

    Research output: Contribution to journalArticle

  6. The use of tobacco mosaic virus and cowpea mosaic virus for the production of novel metal nanomaterials

    Love, A. J., Makarov, V., Yaminsky, I., Kalinina, N. O. & Taliansky, M. E. 20 Jan 2014 In : Virology. 449, p. 133-139 7 p.

    Research output: Contribution to journalScientific review

  7. The Arabidopsis Mediator Complex Subunits MED16, MED14, and MED2 Regulate Mediator and RNA Polymerase II Recruitment to CBF-Responsive Cold-Regulated Genes

    Hemsley, P. A., Hurst, C. H., Kaliyadasa, E., Lamb, R., Knight, M. R., De Cothi, E. A., Steele, J. F. & Knight, H. 10 Jan 2014 In : Plant Cell.

    Research output: Contribution to journalArticle

  8. Mp10 and Mp42 from the aphid species Myzus persicae trigger plant defenses in Nicotiana benthamiana through different activities

    Rodriguez, P. A., Stam, R., Warbroek, T. & Bos, J. I. B. 1 Jan 2014 In : Molecular Plant - Microbe Interactions. 27, 1, p. 30-39 10 p.

    Research output: Contribution to journalArticle

  9. Coilin, the signature protein of Cajal bodies, differentially modulates the interactions of plants with viruses in widely different taxa

    Shaw, J., Love, A. J., Makarova, S. S., Kalinina, N. O., Harrison, B. D. & Taliansky, M. E. 2014 In : Nucleus. 5, 1, p. 579-588 10 p.

    Research output: Contribution to journalArticle

  10. Energy costs of carbon dioxide concentrating mechanisms in aquatic organisms

    Raven, J. A., Beardall, J. & Giordano, M. 2014 In : Photosynthesis Research.

    Research output: Contribution to journalArticle

  11. Genotypic variation in the ability of landraces and commercial cereal varieties to avoid manganese deficiency in soils with limited manganese availability: is there a role for root-exuded phytases?

    George, T. S., French, A. S., Brown, L. K., Karley, A. J., White, P. J., Ramsay, L. & Daniell, T. J. 2014 In : Physiologia Plantarum. p. 1-25 25 p.

    Research output: Contribution to journalArticle

  12. In vivo protein-protein interaction studies with BiFC: conditions, cautions, and caveats

    Boevink, P., McLellan, H., Bukharova, T., Engelhardt, S. & Birch, P. 2014 Plant-pathogen interactions: methods and protocols. Birch, P., Jones, J. T. & Bos, J. I. B. (eds.). Humana Press, p. 81-90 10 p. (Methods in Molecular Biology).

    Research output: Chapter in Book/Report/Conference proceedingChapter (peer-reviewed)

  13. Leaf-disc assay based on transient over-expression in Nicotiana benthamiana to allow functional screening of candidate effectors from aphids

    Rodriguez, P. A., Hogenhout, S. A. & Bos, J. I. B. 2014 Plant-pathogen interactions: methods and protocols. Birch, P., Jones, J. T. & Bos, J. I. B. (eds.). Humana Press, p. 137-143 7 p. (Methods in Molecular Biology).

    Research output: Chapter in Book/Report/Conference proceedingChapter (peer-reviewed)

  14. Pan-European early switch/early discharge opportunities exist for hospitalised patients with methicillin-resistant Staphylococcus aureus complicated skin and soft-tissue infections

    Nathwani, D., Eckmann, C., Lawson, W., Stephens, J. M., Macahilig, C., Solem, C. T., Simoneau, D., Chambers, R., Li, J. Z. & Haider, S. 2014 In : Clinical Microbiology and Infection.

    Research output: Contribution to journalArticle

  15. Plants and microclimate: a quantitative approach to environmental plant physiology

    Jones, H. G. 2014 3rd ed. Cambridge: Cambridge University Press. 407 p.

    Research output: Book/ReportBook

  16. The Effect of Diel Temperature and Light Cycles on the Growth of Nannochloropsis oculata in a Photobioreactor Matrix

    Tamburic, B., Guruprasad, S., Radford, D. T., Szabó, M., Lilley, R. M., Larkum, A. W. D., Franklin, J. B., Kramer, D. M., Blackburn, S. I., Raven, J. A., Schliep, M. & Ralph, P. J. 2014 In : PLoS ONE. 9, 1, p. e86047

    Research output: Contribution to journalArticle

  17. The feeding tube of cyst nematodes: characterisation of protein exclusion

    Eves-van den Akker, S., Lilley, C. J., Ault, J. R., Ashcroft, A. E., Jones, J. T. & Urwin, P. E. 2014 In : PLoS ONE. 9, 1, e87289

    Research output: Contribution to journalArticle

  18. The SERRATE protein is involved in alternative splicing in Arabidopsis thaliana

    Raczynska, K. D., Stepien, A., Kierzkowski, D., Kalak, M., Bajczyk, M., McNicol, J., Simpson, C. G., Szweykowska-Kulinska, Z., Brown, J. W. S. & Jarmolowski, A. 2014 In : Nucleic Acids Research. 42, 2, p. 1224-1244 21 p.

    Research output: Contribution to journalArticle

  19. RNA function and phosphorus use by photosynthetic organisms

    Raven, J. A. 26 Dec 2013 In : Frontiers in Plant Science. 4, 536

    Research output: Contribution to journalArticle

  20. Arbuscular Mycorrhizal Fungal Networks Vary throughout the Growing Season and between Successional Stages

    Bennett, A. E., Daniell, T. J., Opik, M., Davison, J., Moora, M., Zobel, M., Selosse, M-A. & Evans, D. 17 Dec 2013 In : PLoS ONE. 8, 12, e83241

    Research output: Contribution to journalArticle

  21. Cell biology: up against the wall

    Halpin, C. 2 Dec 2013 In : Current Biology. 23, 23, p. R1048-1050

    Research output: Contribution to journalArticle

  22. The expansion of Phytophthora clade 8b: three new species associated with winter grown vegetable crops

    Bertier, L., Brouwer, H., Decock, A. W. A. M., Cooke, D. E. L., Olsson, C. H. B. & Hofte, M. Dec 2013 In : Persoonia. 31, p. 63-76 14 p.

    Research output: Contribution to journalArticle

  23. The sub-cellular localisation of the potato (Solanum tuberosum L.) carotenoid biosynthetic enzymes, CrtRb2 and PSY2

    Pasare, S., Wright, K., Campbell, R., Morris, W., Ducreux, L., Chapman, S., Bramley, P., Fraser, P., Roberts, A. & Taylor, M. Dec 2013 In : Protoplasma. 250, 6, p. 1381-1392 12 p.

    Research output: Contribution to journalArticle

  24. Top 10 plant-parasitic nematodes in molecular plant pathology

    Jones, J. T., Haegeman, A., Danchin, E. G. J., Gaur, H. S., Helder, J., Jones, M. G. K., Kikuchi, T., Manzanilla-López, R., Palomares-Rius, J. E., Wesemael, W. M. L. & Perry, R. N. Dec 2013 In : Molecular Plant Pathology. 14, 9, p. 946-961 16 p.

    Research output: Contribution to journalArticle

  25. Method for modifying lignin biosynthesis in plants

    Halpin, C., Simpson, G. & Boerjan, W. 14 Nov 2013 WO/2013/167902 A1

    Research output: Patent

  26. Construction of reference chromosome-scale pseudomolecules for potato: integrating the potato genome with genetic and physical maps

    Sharma, S. K. , Bolser, D. , de Boer, J. , Sønderkær, M. , Amoros, W. , Carboni, M. F. , D'Ambrosio, J. M. , de la Cruz, G. , Di Genova, A. , Douches, D. S. , Eguiluz, M. , Guo, X. , Guzman, F. , Hackett, C. A. , Hamilton, J. P. , Li, G. , Li, Y. , Lozano, R. , Maass, A. , Marshall, D. & 25 others Martinez, D., McLean, K., Mejía, N., Milne, L., Munive, S., Nagy, I., Ponce, O., Ramirez, M., Simon, R., Thomson, S. J., Torres, Y., Waugh, R., Zhang, Z., Huang, S., Visser, R. G. F., Bachem, C. W. B., Sagredo, B., Feingold, S. E., Orjeda, G., Veilleux, R. E., Bonierbale, M., Jacobs, J. M. E., Milbourne, D., Martin, D. M. A. & Bryan, G. J. 1 Nov 2013 In : G3 : Genes, Genomes, Genetics. 3, 11, p. 2031-2047 17 p.

    Research output: Contribution to journalArticle

  27. Anchoring and ordering NGS contig assemblies by population sequencing (POPSEQ)

    Mascher, M., Muehlbauer, G. J., Rokhsar, D. S., Chapman, J., Schmutz, J., Barry, K., Munoz-Amatriain, M., Close, T. J., Wise, R. P., Schulman, A. H., Himmelbach, A., Mayer, K. F. X., Scholz, U., Poland, J. A., Stein, N. & Waugh, R. Nov 2013 In : Plant Journal. 76, 4, p. 718-727 10 p.

    Research output: Contribution to journalArticle

  28. Transcription Termination and Chimeric RNA Formation Controlled by Arabidopsis thaliana FPA

    Duc, C., Sherstnev, A., Cole, C., Barton, G. & Simpson, G. G. 31 Oct 2013 In : PLoS Genetics. 9, 10, e1003867

    Research output: Contribution to journalArticle

  29. Characterization of cell death inducing Phytophthora capsici CRN effectors suggests diverse activities in the host nucleus

    Stam, R., Howden, A., Delgado Cerezo, M., Marques Monteiro Amaro, T., Motion, G., Pham, J. & Huitema, E. 21 Oct 2013 In : Frontiers in Plant Science. 4, 00387

    Research output: Contribution to journalArticle

  30. An RxLR Effector from Phytophthora infestans Prevents Re-localisation of Two Plant NAC Transcription Factors from the Endoplasmic Reticulum to the Nucleus

    McLellan, H., Boevink, P., Armstrong, M., Pritchard, L., Gomez, S., Morales, J., Whisson, S. & Birch, P. R. J. 10 Oct 2013 In : PLoS Pathogens. 9, 10, e1003670

    Research output: Contribution to journalArticle

  31. The RNA-binding protein FPA regulates flg22-triggered defense responses and transcription factor activity by alternative polyadenylation

    Lyons, R., Iwase, A., Gänsewig, T., Sherstnev, A., Duc, C., Barton, G. J., Hanada, K., Higuchi-Takeuchi, M., Matsui, M., Sugimoto, K., Kazan, K., Simpson, G. G. & Shirasu, K. 9 Oct 2013 In : Scientific Reports. 3, 10 p.2866

    Research output: Contribution to journalArticle

  32. Variation in the interaction between alleles of HvAPETALA2 and microRNA172 determines the density of grains on the barley inflorescence

    Houston, K., McKim, S. M., Comadran, J., Bonar, N., Druka, I., Uzrek, N., Cirillo, E., Guzy-Wrobelska, J., Collins, N. C., Halpin, C., Hansson, M., Dockter, C., Druka, A. & Waugh, R. 8 Oct 2013 In : Proceedings of the National Academy of Sciences of the United States of America. 110, 41, p. 16675-16680 6 p.

    Research output: Contribution to journalArticle

  33. Assessing the significance of soil erosion for arable weed seedbank diversity in agro-ecosystems

    Lewis, T. D., Rowan, J. S., Hawes, C. & McKenzie, B. M. Oct 2013 In : Progress in Physical Geography. 37, 5, p. 622-641 20 p.

    Research output: Contribution to journalArticle

  34. The evolution of autotrophy in relation to phosphorus requirement

    Raven, J. A. Oct 2013 In : Journal of Experimental Botany. 64, 13, p. 4023-4046 24 p.

    Research output: Contribution to journalArticle

  35. Caffeoyl shikimate esterase (CSE) is an enzyme in the lignin biosynthetic pathway in Arabidopsis

    Vanholme, R., Cesarino, I., Rataj, K., Xiao, Y., Sundin, L., Goeminne, G., Kim, H., Cross, J., Morreel, K., Araujo, P., Welsh, L., Haustraete, J., McClellan, C., Vanholme, B., Ralph, J., Simpson, G. G., Halpin, C. & Boerjan, W. 6 Sep 2013 In : Science. 341, 6150, p. 1103-1106 4 p.

    Research output: Contribution to journalArticle

  36. Biomechanics of nodal, seminal and lateral roots of barley: Effects of diameter, waterlogging and mechanical impedance

    Loades, K. W., Bengough, A. G., Bransby, M. F. & Hallett, P. D. 1 Sep 2013 In : Plant and Soil. 370, 1-2, p. 407-418 12 p.

    Research output: Contribution to journalArticle

  37. Algae influence the hydrophysical parameters of a sandy soil

    Lichner, L., Hallett, P. D., Drongová, Z., Czachor, H., Kovacik, L., Mataix-Solera, J. & Homolák, M. Sep 2013 In : CATENA. 108, p. 58-68 11 p.

    Research output: Contribution to journalArticle

  38. Do plants need nitrate?: the mechanisms by which nitrogen form affects plants

    Andrews, M., Raven, J. A. & Lea, P. J. Sep 2013 In : Annals of Applied Biology. 163, 2

    Research output: Contribution to journalArticle

  39. Plant SILAC: stable-isotope labelling with amino acids of Arabidopsis seedlings for quantitative proteomics

    Lewandowska, D., ten Have, S., Hodge, K., Tillemans, V., Lamond, A. I. & Brown, J. W. S. 20 Aug 2013 In : PLoS ONE. 8, 8, e72207

    Research output: Contribution to journalArticle

  40. Application of Bayesian Belief Networks to quantify and map areas at risk to soil threats: Using soil compaction as an example

    Troldborg, M., Aalders, I., Towers, W., Hallett, P. D., McKenzie, B. M., Bengough, A. G., Lilly, A., Ball, B. C. & Hough, R. L. Aug 2013 In : Soil & Tillage Research. 132, p. 56-68 13 p.

    Research output: Contribution to journalArticle

  41. Can root electrical capacitance be used to predict root mass in soil?

    Dietrich, R. C., Bengough, A. G., Jones, H. G. & White, P. J. Jul 2013 In : Annals of Botany. 112, 2, p. 457-464 8 p.

    Research output: Contribution to journalArticle

  42. Small changes in ambient temperature affect alternative splicing in Arabidopsis thaliana

    Streitner, C., Simpson, C. G., Shaw, P., Danisman, S., Brown, J. W. S. & Staiger, D. Jul 2013 In : Plant Signaling and Behavior. 8, 7, p. e24638.1-e24638.7 7 p.

    Research output: Contribution to journalArticle

  43. Palmitoylation in plants: New insights through proteomics

    Hemsley, P. A., Weimar, T., Lilley, K., Dupree, P. & Grierson, C. 5 Jun 2013 In : Plant Signaling and Behavior. 8, 8, e25209

    Research output: Contribution to journalArticle

  44. Root–soil friction: quantification provides evidence for measurable benefits for manipulation of root-tip traits

    McKenzie, B. M., Mullins, C. E., Tisdall, J. M. & Bengough, A. G. Jun 2013 In : Plant, Cell & Environment. 36, 6, p. 1085-1092 8 p.

    Research output: Contribution to journalArticle

  45. Linkage analysis and QTL mapping using SNP dosage data in a tetraploid potato mapping population

    Hackett, C. A., McLean, K. & Bryan, G. J. 21 May 2013 In : PLoS ONE. 8, 5, e63939

    Research output: Contribution to journalArticle

  46. Exploitation of interspecific diversity for monocot crop improvement

    King, J., Armstead, I., Harper, J., Ramsey, L., Snape, J., Waugh, R., James, C., Thomas, A., Gasior, D., Kelly, R., Roberts, L., Gustafson, P. & King, I. May 2013 In : Heredity. 110, 5, p. 475-483 9 p.

    Research output: Contribution to journalArticle

  47. Iron acquisition and allocation in stramenopile algae

    Raven, J. A. May 2013 In : Journal of Experimental Botany. 64, 8, p. 2119-2127 9 p.

    Research output: Contribution to journalComment/debate

  48. Microbial responses to the erosional redistribution of soil organic carbon in arable fields.

    Dungait, J. A. J., Ghee, C., Rowan, J. S., McKenzie, B. M., Hawes, C., Dixon, E. R., Paterson, E. & Hopkins, D. W. May 2013 In : Soil Biology & Biochemistry. 60, p. 195-201 7 p.

    Research output: Contribution to journalArticle

  49. Rubisco: still the most abundant protein of Earth?

    Raven, J. A. Apr 2013 In : New Phytologist. 198, 1, p. 1-3 3 p.

    Research output: Contribution to journalArticle

  50. Swansong biospheres: refuges for life and novel microbial biospheres on terrestrial planets near the end of their habitable lifetimes

    O'Malley-James, J. T., Greaves, J. S., Raven, J. A. & Cockell, C. S. Apr 2013 In : International Journal of Astrobiology. 12, 2, p. 99-112 14 p.

    Research output: Contribution to journalArticle

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