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Plant Sciences

  1. DNA entropy reveals a significant difference in complexity between housekeeping and tissue specific gene promoters

    Thomas, D., Finan, C., Newport, M. J. & Jones, S. Oct 2015 In : Computational Biology and Chemistry. 58, p. 19-24 6 p.

    Research output: Contribution to journalArticle

  2. Characterization of Arabidopsis transcriptional responses to different aphid species reveals genes that contribute to host susceptibility and non-host resistance

    Jaouannet, M., Morris, J. A., Hedley, P. E. & Bos, J. I. B. 20 May 2015 In : PLoS Pathogens. 11, 5, 26 p.e1004918

    Research output: Contribution to journalArticle

  3. Barley: a translational model for adaptation to climate change

    Dawson, I. K., Russell, J., Powell, W., Steffenson, B., Thomas, W. T. B. & Waugh, R. 1 May 2015 In : New Phytologist. 206, 3, p. 913-931 19 p.

    Research output: Contribution to journalArticle

  4. In search of future earths: assessing the possibility of finding Earth analogues in the later stages of their habitable lifetimes

    O'Malley-James, J. T., Greaves, J. S., Raven, J. A. & Cockell, C. S. May 2015 In : Astrobiology. 15, 5, p. 400-411 12 p.

    Research output: Contribution to journalArticle

  5. Optimising ketocarotenoid production in potato tubers: Effect of genetic background, transgene combinations and environment

    Campbell, R., Morris, W. L., Mortimer, C. L., Misawa, N., Ducreux, L. J. M., Morris, J. A., Hedley, P. E., Fraser, P. D. & Taylor, M. A. May 2015 In : Plant Science. 234, p. 27-37 11 p.

    Research output: Contribution to journalArticle

  6. The Top 10 oomycete pathogens in molecular plant pathology

    Kamoun, S. , Furzer, O. , Jones, J. D. G. , Judelson, H. S. , Ali, G. S. , Dalio, R. J. D. , Roy, S. G. , Schena, L. , Zambounis, A. , Panabières, F. , Cahill, D. , Ruocco, M. , Figueiredo, A. , Chen, X. R. , Hulvey, J. , Stam, R. , Lamour, K. , Gijzen, M. , Tyler, B. M. , Grünwald, N. J. & 14 others Mukhtar, M. S., Tomé, D. F. A., Tör, M., Van Den Ackerveken, G., McDowell, J., Daayf, F., Fry, W. E., Lindqvist-Kreuze, H., Meijer, H. J. G., Petre, B., Ristaino, J., Yoshida, K., Birch, P. R. J. & Govers, F. May 2015 In : Molecular Plant Pathology. 16, 4, p. 413-434 22 p.

    Research output: Contribution to journalArticle

  7. Editorial on plants as alternative hosts for human and animal pathogens

    Holden, N. J., Jackson, R. W. & Schikora, A. 30 Apr 2015 In : Frontiers in Microbiology. 6, 2 p.397

    Research output: Contribution to journalEditorial

  8. Modelling the genetic architecture of flowering time control in barley through nested association mapping

    Maurer, A., Draba, V., Jiang, Y., Schnaithmann, F., Sharma, R., Schumann, E., Kilian, B., Reif, J. C. & Pillen, K. 12 Apr 2015 In : BMC Genomics. 16, 12 p.290

    Research output: Contribution to journalArticle

  9. Compartmentation of defensive compound synthesis in a red alga

    Raven, J. A. 1 Apr 2015 In : Journal of Applied Phycology. 51, 2, p. 222-224 3 p.

    Research output: Contribution to journalArticle

  10. Phenolic compounds in blackcurrant (Ribes nigrum L.) leaves relative to leaf position and harvest date

    Vagiri, M., Conner, S., Stewart, D., Andersson, S. C., Verrall, S., Johansson, E. & Rumpunen, K. 1 Apr 2015 In : Food Chemistry. 172, p. 135-142 8 p.

    Research output: Contribution to journalArticle

  11. Improving intercropping: a synthesis of research in agronomy, plant physiology and ecology

    Brooker, R. W. , Bennett, A. E. , Cong, W. F. , Daniell, T. J. , George, T. S. , Hallett, P. D. , Hawes, C. , Iannetta, P. P. M. , Jones, H. G. , Karley, A. J. , Li, L. , Mckenzie, B. M. , Pakeman, R. J. , Paterson, E. , Schöb, C. , Shen, J. , Squire, G. , Watson, C. A. , Zhang, C. , Zhang, F. & 2 others Zhang, J. & White, P. J. Apr 2015 In : New Phytologist. 206, 1, p. 107-117 11 p.

    Research output: Contribution to journalArticle

  12. Photosynthesis in reproductive structures: costs and benefits

    Raven, J. A. & Griffiths, H. Apr 2015 In : Journal of Experimental Botany. 66, 7, p. 1699-1705 7 p.

    Research output: Contribution to journalArticle

  13. Plant lignin content altered by soil microbial community

    Bennett, A. E., Grussu, D., Kam, J., Caul, S. & Halpin, C. Apr 2015 In : New Phytologist. 206, 1, p. 166-174 9 p.

    Research output: Contribution to journalArticle

  14. Structure and function of the bacterial root microbiota in wild and domesticated barley

    Bulgarelli, D., Garrido-Oter, R., Münch, P. C., Weiman, A., Dröge, J., Pan, Y., McHardy, A. C. & Schulze-Lefert, P. 11 Mar 2015 In : Cell Host & Microbe. 17, 3, p. 392-403 12 p.

    Research output: Contribution to journalArticle

  15. Alternative splicing of mini-exons in the Arabidopsis leaf rust receptor-like kinase LRK10 genes affects subcellular localisation

    Shin, K. H., Yang, S. H., Lee, J. Y., Lim, C. W., Lee, S. C., Brown, J. W. S. & Kim, S. H. Mar 2015 In : Plant Cell Reports. 34, 3, p. 495-505 11 p.

    Research output: Contribution to journalArticle

  16. The plant microbiome at work

    Schlaeppi, K. & Bulgarelli, D. Mar 2015 In : Molecular Plant - Microbe Interactions. 28, 3, p. 212-217 6 p.

    Research output: Contribution to journalArticle

  17. Evolutionary relationships among barley and Arabidopsis core circadian clock and clock-associated genes

    Calixto, C. P. G., Waugh, R. & Brown, J. W. S. Feb 2015 In : Journal of Molecular Evolution. 80, 2, p. 108-119 12 p.

    Research output: Contribution to journalArticle

  18. Current perspective on protein S-acylation in plants: more than just a fatty anchor?

    Hurst, C. H. & Hemsley, P. A. 2015 In : Journal of Experimental Botany. 8 p.

    Research output: Contribution to journalArticle

  19. Nuclear processes associated with plant immunity and pathogen susceptibility

    Motion, G. B., Marques Monteiro Amaro, T. M., Kulagina, N. & Huitema, E. 2015 In : Briefings in Functional Genomics.

    Research output: Contribution to journalArticle

  20. Plant root associated Bacillus subtilis biofilm formation

    Bissett, E., De Vega Perez, D., Holden, N. & Stanley-Wall, N. R. 2015

    Research output: Contribution to conferencePoster

  21. Structure, function and evolution of the microbiota thriving at the root-soil interface

    Bulgarelli, D. 2015

    Research output: Contribution to conferenceOther

  22. U-box E3 ubiquitin ligase PUB17 acts in the nucleus to promote specific immune pathways triggered by Phytophthora infestans

    He, Q., McLellan, H., Boevink, P. C., Sadanandom, A., Xie, C., Birch, P. R. J. & Tian, Z. 2015 In : Journal of Experimental Botany. 11 p.

    Research output: Contribution to journalArticle

  23. Active water transport in unicellular algae: where, why, and how

    Raven, J. A. & Doblin, M. A. 22 Dec 2014 In : Journal of Experimental Botany. 65, 22, p. 6279-6292 14 p.

    Research output: Contribution to journalArticle

  24. Stopped in its tracks: how λ-cyhalothrin can break the aphid transmission of a potato potyvirus

    Fenton, B., Salter, T., Malloch, G., Begg, G. & Anderson, E. 18 Dec 2014 In : Pest Management Science.

    Research output: Contribution to journalArticle

  25. Progress in understanding the mechanisms and functional importance of protein-membrane interactions in plants

    Hemsley, P. A. Dec 2014 In : New Phytologist. 204, 4, p. 741-743 3 p.

    Research output: Contribution to journalArticle

  26. The zigzag model of plant-microbe interactions: is it time to move on?

    Pritchard, L. & Birch, P. R. J. Dec 2014 In : Molecular Plant Pathology. 15, 9, p. 865-870 6 p.

    Research output: Contribution to journalArticle

  27. Genetic dissection of photoperiod response based on GWAS of pre-anthesis phase duration in spring barley

    Alqudah, A. M., Sharma, R., Pasam, R. K., Graner, A., Kilian, B. & Schnurbusch, T. 24 Nov 2014 In : PLoS ONE. 9, 11, 27 p.e113120

    Research output: Contribution to journalArticle

  28. Molecular effects of resistance elicitors from biological origin and their potential for crop protection

    Wiesel, L., Newton, A. C., Elliott, I., Booty, D., Gilroy, E. M., Birch, P. R. J. & Hein, I. 21 Nov 2014 In : Frontiers in Plant Science. 5, 13 p.655

    Research output: Contribution to journalArticle

  29. The role of effectors in nonhost resistance to filamentous plant pathogens

    Stam, R., Mantelin, S., McLellan, H. & Thilliez, G. 5 Nov 2014 In : Frontiers in Plant Science. 5, 582

    Research output: Contribution to journalArticle

  30. Detection of the virulent form of AVR3a from Phytophthora infestans following artificial evolution of potato resistance gene R3a

    Chapman, S., Stevens, L. J., Boevink, P. C., Engelhardt, S., Alexander, C. J., Harrower, B., Champouret, N., McGeachy, K., Van Weymers, P. S. M., Chen, X., Birch, P. R. J. & Hein, I. 23 Oct 2014 In : PLoS ONE. 9, 10, 11 p.e110158

    Research output: Contribution to journalArticle

  31. A genome wide association scan for (1,3;1,4)-β-glucan content in the grain of contemporary 2-row Spring and Winter barleys

    Houston, K., Russell, J., Schreiber, M., Halpin, C., Oakey, H., Washington, J. M., Booth, A., Shirley, N., Burton, R. A., Fincher, G. B. & Waugh, R. 17 Oct 2014 In : BMC Genomics. 15, 15 p.907

    Research output: Contribution to journalArticle

  32. Allelic variation at Fr-H1/Vrn-H1 and Fr-H2 loci is the main determinant of frost tolerance in spring barley

    Tondelli, A., Pagani, D., Ghafoori, I. N., Rahimi, M., Ataei, R., Rizza, F., Flavell, A. J. & Cattivelli, L. 1 Oct 2014 In : Environmental and Experimental Botany. 106, p. 148-155 8 p.

    Research output: Contribution to journalArticle

  33. Beyond nutrition and agriculture policy: collaborating for a food policy

    Stewart, D., Kennedy, A. & Pavel, A. Oct 2014 In : British Journal of Nutrition. 112 , Suppl. 2, p. S65-S74 10 p.

    Research output: Contribution to journalArticle

  34. Genome-Tagged Amplification (GTA): a PCR-based method to prepare sample-tagged amplicons from hundreds of individuals for next generation sequencing

    Ho, T., Cardle, L., Xu, X., Bayer, M., Prince, K. S. J., Mutava, R. N., Marshall, D. F. & Syed, N. Oct 2014 In : Molecular Breeding. 34, 3, p. 977-988 12 p.

    Research output: Contribution to journalArticle

  35. Oat agriculture, cultivation and breeding targets: implications for human nutrition and health

    Stewart, D. & McDougall, G. Oct 2014 In : British Journal of Nutrition. 112 , Suppl. 2, p. S50-S57 8 p.

    Research output: Contribution to journalArticle

  36. Photosynthetic potential of planets in 3 : 2 spin-orbit resonances

    Brown, S. P., Mead, A. J., Forgan, D. H., Raven, J. A. & Cockell, C. S. Oct 2014 In : International Journal of Astrobiology. 13, 4, p. 279-289 11 p.

    Research output: Contribution to journalArticle

  37. In silico identification and characterization of conserved plant microRNAs in barley

    Wu, X., Hornyik, C., Bayer, M., Marshall, D., Waugh, R. & Zhang, R. Sep 2014 In : Central European Journal of Biology. 9, 9, p. 841-852 12 p.

    Research output: Contribution to journalArticle

  38. Barley has two peroxisomal ABC transporters with multiple functions in β-oxidation

    Mendiondo, G. M., Medhurst, A., van Roermund, C. W., Zhang, X., Devonshire, J., Scholefield, D., Fernández, . J., Axcell, B., Ramsay, L., Waterham, H. R., Waugh, R., Theodoulou, F. L. & Holdsworth, M. J. Sep 2014 In : Journal of Experimental Botany. 65, 17, p. 4833-4847 15 p.

    Research output: Contribution to journalArticle

  39. Sequence diversity in the large subunit of RNA polymerase I contributes to Mefenoxam insensitivity in Phytophthora infestans

    Randall, E., Young, V., Sierotzki, H., Scalliet, G., Birch, P. R. J., Cooke, D. E. L., Csukai, M. & Whisson, S. C. Sep 2014 In : Molecular Plant Pathology. 15, 7, p. 664-676 13 p.

    Research output: Contribution to journalArticle

  40. The low recombining pericentromeric region of barley restricts gene diversity and evolution but not gene expression

    Baker, K., Bayer, M., Cook, N., Dreißig, S., Dhillon, T., Russell, J., Hedley, P. E., Morris, J., Ramsay, L., Colas, I., Waugh, R., Steffenson, B., Milne, I., Stephen, G., Marshall, D. & Flavell, A. J. Sep 2014 In : Plant Journal. 79, 6, p. 981-992 12 p.

    Research output: Contribution to journalArticle

  41. CO2 concentrating mechanisms and environmental change

    Raven, J. A. & Beardall, J. Aug 2014 In : Aquatic Botany. 118, p. 24-37 14 p.

    Research output: Contribution to journalArticle

  42. Helium: visualization of large scale plant pedigrees

    Shaw, P. D., Graham, M., Kennedy, J., Milne, I. & Marshall, D. F. Aug 2014 In : BMC Bioinformatics. 15, 15 p.259

    Research output: Contribution to journalArticle

  43. Hypersensitive response to Potato virus Y in potato cultivar Sárpo Mira is conferred by the Ny-Smira gene located on the long arm of chromosome IX

    Tomczyńska, I., Jupe, F., Hein, I., Marczewski, W. & Sliwka, J. Aug 2014 In : Molecular Breeding. 34, 2, p. 471-480 10 p.

    Research output: Contribution to journalArticle

  44. Nitrogen and sulfur assimilation in plants and algae

    Giordano, M. & Raven, J. A. Aug 2014 In : Aquatic Botany. 118, p. 45-61 17 p.

    Research output: Contribution to journalArticle

  45. Recognition of an Avr3a homologue plays a major role in mediating nonhost resistance to Phytophthora capsici in Nicotiana species

    Vega-Arreguín, J. C., Jalloh, A., Bos, J. I. & Moffett, P. Aug 2014 In : Molecular Plant - Microbe Interactions. 27, 8, p. 770-780 11 p.

    Research output: Contribution to journalArticle

  46. A chromosome-based draft sequence of the hexaploid bread wheat (Triticum aestivum) genome

    The International Wheat Genome Sequencing Consortium (IWGSC) 18 Jul 2014 In : Science. 345, 6194, 11 p.1251788

    Research output: Contribution to journalArticle

  47. Algae

    Raven, J. A. & Giordano, M. 7 Jul 2014 In : Current Biology. 24, 13, p. R590-R595 6 p.

    Research output: Contribution to journalArticle

  48. Arabidopsis PTB1 and PTB2 proteins negatively regulate splicing of a mini-exon splicing reporter and affect alternative splicing of endogenous genes differentially

    Simpson, C. G., Lewandowska, D., Liney, M., Davidson, D., Chapman, S., Fuller, J., McNicol, J., Shaw, P. & Brown, J. W. S. Jul 2014 In : New Phytologist. 203, 2, p. 424-436 13 p.

    Research output: Contribution to journalArticle

  49. Flagella interact with ionic plant lipids to mediate adherence of pathogenic Escherichia coli to fresh produce plants

    Rossez, Y., Holmes, A., Wolfson, E. B., Gally, D. L., Mahajan, A., Pedersen, H. L., Willats, W. G. T., Toth, I. K. & Holden, N. J. Jul 2014 In : Environmental Microbiology. 16, 7, p. 2181-2195 15 p.

    Research output: Contribution to journalArticle

  50. The future of the northeast Atlantic benthic flora in a high CO2 world

    Brodie, J. , Williamson, C. J. , Smale, D. A. , Kamenos, N. A. , Mieszkowska, N. , Santos, R. , Cunliffe, M. , Steinke, M. , Yesson, C. , Anderson, K. M. , Asnaghi, V. , Brownlee, C. , Burdett, H. L. , Burrows, M. T. , Collins, S. , Donohue, P. J. C. , Harvey, B. , Foggo, A. , Noisette, F. , Nunes, J. & 6 others Ragazzola, F., Raven, J. A., Schmidt, D. N., Suggett, D., Teichberg, M. & Hall-Spencer, J. M. Jul 2014 In : Ecology and Evolution. 4, 13, p. 2787-2798 12 p.

    Research output: Contribution to journalArticle

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