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  1. Arabidopsis PTB1 and PTB2 proteins negatively regulate splicing of a mini-exon splicing reporter and affect alternative splicing of endogenous genes differentially

    Simpson, C. G., Lewandowska, D., Liney, M., Davidson, D., Chapman, S., Fuller, J., McNicol, J., Shaw, P. & Brown, J. W. S. Jul 2014 In : New Phytologist. 203, 2, p. 424-436 13 p.

    Research output: Contribution to journalArticle

  2. QTL mapping in autotetraploids using SNP dosage information

    Hackett, C. A., Bradshaw, J. E. & Bryan, G. J. Jul 2014 In : Theoretical and Applied Genetics.

    Research output: Contribution to journalArticle

  3. Low levels of ribosomal RNA partly account for the very high photosynthetic phosphorus-use efficiency of Proteaceae species

    Sulpice, R., Ishihara, H., Schlereth, A., Cawthray, G. R., Encke, B., Giavalisco, P., Ivakov, A., Arrivault, S., Jost, R., Krohn, N., Kuo, J., Laliberté, E., Pearse, S. J., Raven, J. A., Scheible, W-R., Teste, F., Veneklaas, E. J., Stitt, M. & Lambers, H. Jun 2014 In : Plant, Cell & Environment. 37, 6, p. 1276-1298 23 p.

    Research output: Contribution to journalArticle

  4. Field phenotyping of potato to assess root and shoot characteristics associated with drought tolerance

    Wishart, J., George, T. S., Brown, L. K., White, P. J., Ramsay, G., Jones, H. & Gregory, P. J. May 2014 In : Plant and Soil. 378, 1-2, p. 351-363 13 p.

    Research output: Contribution to journalArticle

  5. Genome-Tagged Amplification (GTA): a PCR-based method to prepare sample-tagged amplicons from hundreds of individuals for next generation sequencing

    Ho, T., Cardle, L., Xu, X., Bayer, M., Prince, K. S. J., Mutava, R. N., Marshall, D. F. & Syed, N. 12 Apr 2014 In : Molecular Breeding.

    Research output: Contribution to journalArticle

  6. Phytophthora infestans RXLR effector PexRD2 interacts with host MAPKKKε to suppress plant immune signaling

    King, S. R. F., McLellan, H., Boevink, P. C., Armstrong, M. R., Bukharov, T., Sukarta, O., Win, J., Kamoun, S., Birch, P. R. J. & Banfield, M. J. Mar 2014 In : Plant Cell. 26, 3, p. 1345-1359 15 p.

    Research output: Contribution to journalArticle

  7. Geographical gradient of the eIF4E alleles conferring resistance to potyviruses in pea (Pisum) germplasm

    Konečná, E., Safářová, D., Navrátil, M., Hanáček, P., Coyne, C., Flavell, A., Vishnyakova, M., Ambrose, M., Redden, R. & Smýkal, P. Mar 2014 In : PLoS ONE. 9, 3, e90394

    Research output: Contribution to journalArticle

  8. Message ends: RNA 3' processing and flowering time control

    Rataj, K. & Simpson, G. G. Feb 2014 In : Journal of Experimental Botany. 65, 2, p. 353-363 11 p.

    Research output: Contribution to journalArticle

  9. Physiological, biochemical and molecular responses of the potato (Solanum tuberosum L.) plant to moderately elevated temperature

    Hancock, R. D., Morris, W. L., Ducreux, L. J. M., Morris, J. A., Usman, M., Verrall, S. R., Fuller, J., Simpson, C. G., Zhang, R., Hedley, P. E. & Taylor, M. A. Feb 2014 In : Plant, Cell & Environment. 37, 2, p. 439-450 12 p.

    Research output: Contribution to journalArticle

  10. The use of tobacco mosaic virus and cowpea mosaic virus for the production of novel metal nanomaterials

    Love, A. J., Makarov, V., Yaminsky, I., Kalinina, N. O. & Taliansky, M. E. 20 Jan 2014 In : Virology. 449, p. 133-139 7 p.

    Research output: Contribution to journalScientific review

  11. The Arabidopsis Mediator Complex Subunits MED16, MED14, and MED2 Regulate Mediator and RNA Polymerase II Recruitment to CBF-Responsive Cold-Regulated Genes

    Hemsley, P. A., Hurst, C. H., Kaliyadasa, E., Lamb, R., Knight, M. R., De Cothi, E. A., Steele, J. F. & Knight, H. 10 Jan 2014 In : Plant Cell.

    Research output: Contribution to journalArticle

  12. Mp10 and Mp42 from the aphid species Myzus persicae trigger plant defenses in Nicotiana benthamiana through different activities

    Rodriguez, P. A., Stam, R., Warbroek, T. & Bos, J. I. B. 1 Jan 2014 In : Molecular Plant - Microbe Interactions. 27, 1, p. 30-39 10 p.

    Research output: Contribution to journalArticle

  13. Coilin, the signature protein of Cajal bodies, differentially modulates the interactions of plants with viruses in widely different taxa

    Shaw, J., Love, A. J., Makarova, S. S., Kalinina, N. O., Harrison, B. D. & Taliansky, M. E. 2014 In : Nucleus. 5, 1, p. 579-588 10 p.

    Research output: Contribution to journalArticle

  14. Energy costs of carbon dioxide concentrating mechanisms in aquatic organisms

    Raven, J. A., Beardall, J. & Giordano, M. 2014 In : Photosynthesis Research.

    Research output: Contribution to journalArticle

  15. Enhanced biofuel production using optimality, pathway modification and waste minimization

    Raven, J. A. & Ralph, P. J. 2014

    Research output: Contribution to journalArticle

  16. Functionally Redundant RXLR Effectors from Phytophthora infestans Act at Different Steps to Suppress Early flg22-Triggered Immunity

    Zheng, X., McLellan, H., Fraiture, M., Liu, X., Boevink, P. C., Gilroy, E. M., Chen, Y., Kandel, K., Sessa, G., Birch, P. R. J. & Brunner, F. 2014 In : PLoS Pathogens. 10, 4

    Research output: Contribution to journalArticle

  17. Genotypic variation in the ability of landraces and commercial cereal varieties to avoid manganese deficiency in soils with limited manganese availability: is there a role for root-exuded phytases?

    George, T. S., French, A. S., Brown, L. K., Karley, A. J., White, P. J., Ramsay, L. & Daniell, T. J. 2014 In : Physiologia Plantarum. p. 1-25 25 p.

    Research output: Contribution to journalArticle

  18. Improved annotation of 3' untranslated regions and complex loci by combination of strand-specific direct RNA sequencing, RNA-seq and ESTs

    Schurch, N. J., Cole, C., Sherstnev, A., Song, J., Duc, C., Storey, K. G., McLean, W. H. I., Brown, S. J., Simpson, G. G. & Barton, G. J. 2014 In : PLoS ONE. 9, 4, e94270

    Research output: Contribution to journalArticle

  19. In vivo protein-protein interaction studies with BiFC: conditions, cautions, and caveats

    Boevink, P., McLellan, H., Bukharova, T., Engelhardt, S. & Birch, P. 2014 Plant-pathogen interactions: methods and protocols. Birch, P., Jones, J. T. & Bos, J. I. B. (eds.). Humana Press, p. 81-90 10 p. (Methods in Molecular Biology).

    Research output: Chapter in Book/Report/Conference proceedingChapter (peer-reviewed)

  20. Leaf-disc assay based on transient over-expression in Nicotiana benthamiana to allow functional screening of candidate effectors from aphids

    Rodriguez, P. A., Hogenhout, S. A. & Bos, J. I. B. 2014 Plant-pathogen interactions: methods and protocols. Birch, P., Jones, J. T. & Bos, J. I. B. (eds.). Humana Press, p. 137-143 7 p. (Methods in Molecular Biology).

    Research output: Chapter in Book/Report/Conference proceedingChapter (peer-reviewed)

  21. Photosynthesis in early land plants: adapting to the terrestrial environment

    Raven, J. A. & Edwards, D. 2014 Photosynthesis in bryophytes and early land plants. Hanson , D. T. & Rice, S. K. (eds.). Springer, p. 29-58 30 p. (Advances in photosynthesis and respiration).

    Research output: Chapter in Book/Report/Conference proceedingChapter

  22. Photosynthetic potential of planets in 3: 2 spin-orbit resonances

    Brown, S. P., Mead, A. J., Forgan, D. H., Raven, J. A. & Cockell, C. S. 2014 In : International Journal of Astrobiology.

    Research output: Contribution to journalArticle

  23. Plants and microclimate: a quantitative approach to environmental plant physiology

    Jones, H. G. 2014 3rd ed. Cambridge: Cambridge University Press. 407 p.

    Research output: Book/ReportBook

  24. Sequence diversity in the large subunit of RNA polymerase I contributes to Mefenoxam insensitivity in Phytophthora infestans

    Randall, E., Young, V., Sierotzki, H., Scalliet, G., Birch, P. R. J., Cooke, D. E. L., Csukai, M. & Whisson, S. C. 2014 In : Molecular Plant Pathology.

    Research output: Contribution to journalArticle

  25. Stability, across environments, of grain and alcohol yield, in soft wheat varieties grown for grain distilling or bioethanol production

    Swanston, J. S., Smith, P. L., Thomas, W. T. B., Sylvester-Bradley, R., Kindred, D., Brosnan, J. M., Bringhurst, T. A. & Agu, R. C. 2014 In : Journal of the Science of Food and Agriculture.

    Research output: Contribution to journalArticle

  26. The Effect of Diel Temperature and Light Cycles on the Growth of Nannochloropsis oculata in a Photobioreactor Matrix

    Tamburic, B., Guruprasad, S., Radford, D. T., Szabó, M., Lilley, R. M., Larkum, A. W. D., Franklin, J. B., Kramer, D. M., Blackburn, S. I., Raven, J. A., Schliep, M. & Ralph, P. J. 2014 In : PLoS ONE. 9, 1, p. e86047

    Research output: Contribution to journalArticle

  27. The feeding tube of cyst nematodes: characterisation of protein exclusion

    Eves-van den Akker, S., Lilley, C. J., Ault, J. R., Ashcroft, A. E., Jones, J. T. & Urwin, P. E. 2014 In : PLoS ONE. 9, 1, e87289

    Research output: Contribution to journalArticle

  28. The Irish potato famine pathogen Phytophthora infestans originated in central Mexico rather than the Andes

    Goss, E. M., Tabima, J. F., Cooke, D. E. L., Restrepo, S., Fry, W. E., Forbes, G. A., Fieland, V. J., Cardenas, M. & Grünwald, N. J. 2014 In : Proceedings of the National Academy of Sciences of the United States of America.

    Research output: Contribution to journalArticle

  29. The low recombining pericentromeric region of barley restricts gene diversity and evolution but not gene expression

    Baker, K., Bayer, M., Cook, N., Dreißig, S., Dhillon, T., Russell, J., Hedley, P. E., Morris, J., Ramsay, L., Colas, I., Waugh, R., Steffenson, B., Milne, I., Stephen, G., Marshall, D. & Flavell, A. J. 2014 In : Plant Journal.

    Research output: Contribution to journalArticle

  30. The SERRATE protein is involved in alternative splicing in Arabidopsis thaliana

    Raczynska, K. D., Stepien, A., Kierzkowski, D., Kalak, M., Bajczyk, M., McNicol, J., Simpson, C. G., Szweykowska-Kulinska, Z., Brown, J. W. S. & Jarmolowski, A. 2014 In : Nucleic Acids Research. 42, 2, p. 1224-1244 21 p.

    Research output: Contribution to journalArticle

  31. Understanding the genetic control and physiological traits associated with rhizosheath production by barley (Hordeum vulgare)

    George, T. S., Brown, L. K., Ramsay, L., White, P. J., Newton, A. C., Bengough, A. G., Russell, J. & Thomas, W. T. B. 2014 In : New Phytologist.

    Research output: Contribution to journalArticle

  32. RNA function and phosphorus use by photosynthetic organisms

    Raven, J. A. 26 Dec 2013 In : Frontiers in Plant Science. 4, 536

    Research output: Contribution to journalArticle

  33. Arbuscular Mycorrhizal Fungal Networks Vary throughout the Growing Season and between Successional Stages

    Bennett, A. E., Daniell, T. J., Opik, M., Davison, J., Moora, M., Zobel, M., Selosse, M-A. & Evans, D. 17 Dec 2013 In : PLoS ONE. 8, 12, e83241

    Research output: Contribution to journalArticle

  34. Cell biology: up against the wall

    Halpin, C. 2 Dec 2013 In : Current Biology. 23, 23, p. R1048-1050

    Research output: Contribution to journalArticle

  35. The expansion of Phytophthora clade 8b: three new species associated with winter grown vegetable crops

    Bertier, L., Brouwer, H., Decock, A. W. A. M., Cooke, D. E. L., Olsson, C. H. B. & Hofte, M. Dec 2013 In : Persoonia. 31, p. 63-76 14 p.

    Research output: Contribution to journalArticle

  36. The sub-cellular localisation of the potato (Solanum tuberosum L.) carotenoid biosynthetic enzymes, CrtRb2 and PSY2

    Pasare, S., Wright, K., Campbell, R., Morris, W., Ducreux, L., Chapman, S., Bramley, P., Fraser, P., Roberts, A. & Taylor, M. Dec 2013 In : Protoplasma. 250, 6, p. 1381-1392 12 p.

    Research output: Contribution to journalArticle

  37. Top 10 plant-parasitic nematodes in molecular plant pathology

    Jones, J. T., Haegeman, A., Danchin, E. G. J., Gaur, H. S., Helder, J., Jones, M. G. K., Kikuchi, T., Manzanilla-López, R., Palomares-Rius, J. E., Wesemael, W. M. L. & Perry, R. N. Dec 2013 In : Molecular Plant Pathology. 14, 9, p. 946-961 16 p.

    Research output: Contribution to journalArticle

  38. Method for modifying lignin biosynthesis in plants

    Halpin, C., Simpson, G. & Boerjan, W. 14 Nov 2013 WO/2013/167902 A1

    Research output: Patent

  39. Anchoring and ordering NGS contig assemblies by population sequencing (POPSEQ)

    Mascher, M., Muehlbauer, G. J., Rokhsar, D. S., Chapman, J., Schmutz, J., Barry, K., Munoz-Amatriain, M., Close, T. J., Wise, R. P., Schulman, A. H., Himmelbach, A., Mayer, K. F. X., Scholz, U., Poland, J. A., Stein, N. & Waugh, R. Nov 2013 In : Plant Journal. 76, 4, p. 718-727 10 p.

    Research output: Contribution to journalArticle

  40. Construction of reference chromosome-scale pseudomolecules for potato: integrating the potato genome with genetic and physical maps

    Sharma, S. K. , Bolser, D. , de Boer, J. , Sønderkær, M. , Amoros, W. , Carboni, M. F. , D'Ambrosio, J. M. , de la Cruz, G. , Di Genova, A. , Douches, D. S. , Eguiluz, M. , Guo, X. , Guzman, F. , Hackett, C. A. , Hamilton, J. P. , Li, G. , Li, Y. , Lozano, R. , Maass, A. , Marshall, D. & 25 others Martinez, D., McLean, K., Mejía, N., Milne, L., Munive, S., Nagy, I., Ponce, O., Ramirez, M., Simon, R., Thomson, S. J., Torres, Y., Waugh, R., Zhang, Z., Huang, S., Visser, R. G. F., Bachem, C. W. B., Sagredo, B., Feingold, S. E., Orjeda, G., Veilleux, R. E., Bonierbale, M., Jacobs, J. M. E., Milbourne, D., Martin, D. M. A. & Bryan, G. J. Nov 2013 In : G3 : Genes, Genomes, Genetics. 3, 11, p. 2031-2047 17 p.

    Research output: Contribution to journalArticle

  41. Transcription Termination and Chimeric RNA Formation Controlled by Arabidopsis thaliana FPA

    Duc, C., Sherstnev, A., Cole, C., Barton, G. & Simpson, G. G. 31 Oct 2013 In : PLoS Genetics. 9, 10, e1003867

    Research output: Contribution to journalArticle

  42. An RxLR Effector from Phytophthora infestans Prevents Re-localisation of Two Plant NAC Transcription Factors from the Endoplasmic Reticulum to the Nucleus

    McLellan, H., Boevink, P., Armstrong, M., Pritchard, L., Gomez, S., Morales, J., Whisson, S. & Birch, P. R. J. 10 Oct 2013 In : PLoS Pathogens. 9, 10, e1003670

    Research output: Contribution to journalArticle

  43. The RNA-binding protein FPA regulates flg22-triggered defense responses and transcription factor activity by alternative polyadenylation

    Lyons, R., Iwase, A., Gänsewig, T., Sherstnev, A., Duc, C., Barton, G. J., Hanada, K., Higuchi-Takeuchi, M., Matsui, M., Sugimoto, K., Kazan, K., Simpson, G. G. & Shirasu, K. 9 Oct 2013 In : Scientific Reports. 3, 10 p.2866

    Research output: Contribution to journalArticle

  44. Variation in the interaction between alleles of HvAPETALA2 and microRNA172 determines the density of grains on the barley inflorescence

    Houston, K., McKim, S. M., Comadran, J., Bonar, N., Druka, I., Uzrek, N., Cirillo, E., Guzy-Wrobelska, J., Collins, N. C., Halpin, C., Hansson, M., Dockter, C., Druka, A. & Waugh, R. 8 Oct 2013 In : Proceedings of the National Academy of Sciences of the United States of America. 110, 41, p. 16675-16680 6 p.

    Research output: Contribution to journalArticle

  45. Assessing the significance of soil erosion for arable weed seedbank diversity in agro-ecosystems

    Lewis, T. D., Rowan, J. S., Hawes, C. & McKenzie, B. M. Oct 2013 In : Progress in Physical Geography. 37, 5, p. 622-641 20 p.

    Research output: Contribution to journalArticle

  46. The evolution of autotrophy in relation to phosphorus requirement

    Raven, J. A. Oct 2013 In : Journal of Experimental Botany. 64, 13, p. 4023-4046 24 p.

    Research output: Contribution to journalArticle

  47. Caffeoyl shikimate esterase (CSE) is an enzyme in the lignin biosynthetic pathway in Arabidopsis

    Vanholme, R., Cesarino, I., Rataj, K., Xiao, Y., Sundin, L., Goeminne, G., Kim, H., Cross, J., Morreel, K., Araujo, P., Welsh, L., Haustraete, J., McClellan, C., Vanholme, B., Ralph, J., Simpson, G. G., Halpin, C. & Boerjan, W. 6 Sep 2013 In : Science. 341, 6150, p. 1103-1106 4 p.

    Research output: Contribution to journalArticle

  48. Biomechanics of nodal, seminal and lateral roots of barley: Effects of diameter, waterlogging and mechanical impedance

    Loades, K. W., Bengough, A. G., Bransby, M. F. & Hallett, P. D. 1 Sep 2013 In : Plant and Soil. 370, 1-2, p. 407-418 12 p.

    Research output: Contribution to journalArticle

  49. Algae influence the hydrophysical parameters of a sandy soil

    Lichner, L., Hallett, P. D., Drongová, Z., Czachor, H., Kovacik, L., Mataix-Solera, J. & Homolák, M. Sep 2013 In : CATENA. 108, p. 58-68 11 p.

    Research output: Contribution to journalArticle

  50. Do plants need nitrate?: the mechanisms by which nitrogen form affects plants

    Andrews, M., Raven, J. A. & Lea, P. J. Sep 2013 In : Annals of Applied Biology. 163, 2

    Research output: Contribution to journalArticle

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