Data package for the paper "Machine learning short-ranged many-body interactions in colloidal systems using descriptors based on Voronoi cells"

  • Rinske Alkemade (Utrecht University) (Creator)
  • Rastko Sknepnek (Creator)
  • Frank Smallenburg (Supervisor)
  • Laura C. Filion (Supervisor)

Dataset

Description

Data package accompanying the publication "Machine learning short-ranged many-body interactions in colloidal systems using descriptors based on Voronoi cells". It provides all the necessary resources to reproduce the results and analyses presented in the study, which introduces a machine learning (ML) strategy for accurately modeling highly local many-body interactions in colloidal systems. Specifically, for a two-dimensional system consisting of polymers and colloids, we developed a Voronoi-based description of the system and demonstrated that it accurately captures the many-body nature of the system.

This data package contains all relevant codes, data and analysis notebooks te reproduce the results found in the paper. The package has the following structure:
[FIGURES] contains all figures from the paper, along with the relevant analysis notebooks, Adobe Illustrator files, and additional data to generate the figures.
[CODES] contains the scripts to generate the training data, to train the machine learning models, and to run both the reference, brute force system and the machine learning system.
[DATA] contains the training data, the pre-trained models, and simulation output from both the brute force system an d the machine learned system.

Each directory contains a README.txt file that describes the content of the directory.
Date made available7 May 2025
PublisherZenodo

Keywords

  • Soft Matter
  • Colloids
  • Machine learning
  • Voronoi

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