Whole Genome Sequencing Variant Call Files for Trypanosoma brucei clones resistant to nifurtimox or fexinidazole

  • Alan Fairlamb (Creator)
  • Bernado Foth (Creator)
  • Matthew Berriman (Creator)

Dataset

Description

Genomic DNA prepared from parental and drug resistant clones from T.brucei was sequenced on an Illumina HiSeq 2000 sequencer. The Illumina data were aligned against the T.brucei TREU927 reference genome and variants were called using SAMtools v0.1.19 and BCF tools. The files are in variant call format listing all 190064 genomic positions at which any one of the six drug-resistant and the parental parasite lines had a variant call.
Date made available2015
PublisherUniversity of Dundee
Date of data production19 Apr 2015

Cite this

Fairlamb, A. (Creator), Foth, B. (Creator), Berriman, M. (Creator)(2015). Whole Genome Sequencing Variant Call Files for Trypanosoma brucei clones resistant to nifurtimox or fexinidazole. University of Dundee. Readme_File(.pdf), VCF(cf.gz), VCF(cf.gz), VCF(cf.gz), VCF(cf.gz), VCF(cf.gz), VCF(cf.gz), VCF(cf.gz). 10.15132/10000107