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2026
Aberrant NSUN1 Activity Connects m5C RNA Modification to TDP-43 Neurotoxicity in ALS/FTD
Parra-Torres, M., Dissanayake, K., Gray, J. A., Langlands, A. J., Kucuk, R., Gierlinski, M., Troakes, C., King, A. & McGurk, L. (Lead / Corresponding author), Jan 2026, In: Life Science Alliance. 9, 1, 25 p., e202503297.Research output: Contribution to journal › Article › peer-review
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2025
A non-coding role for trypanosome VSG transcripts in allelic exclusion
Escrivani, D. O., Hutchinson, S., Tinti, M., Wright, J. E., Marques, C. A., Faria, J. R. C., Trenaman, A. & Horn, D. (Lead / Corresponding author), 28 Oct 2025, In: Nucleic Acids Research. 53, 19, 16 p., gkaf1011.Research output: Contribution to journal › Article › peer-review
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Discovery of a CNS active GSK3 degrader using orthogonally reactive linker screening
Holmqvist, A., Kocaturk, N. M., Duncan, C., Riley, J., Baginski, S., Marsh, G., Cresser-Brown, J., Maple, H., Juvonen, K., Sathe, G., Morrice, N., Sutherland, C., Read, K. D. & Farnaby, W. (Lead / Corresponding author), 6 Oct 2025, In: Nature Communications. 16, 16 p., 8857.Research output: Contribution to journal › Article › peer-review
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Disruption of the mRNA m6A writer complex triggers autoimmunity in Arabidopsis
Metheringham, C. L., Srivastava, A. K., Thorpe, P., Maji, A., Parker, M. T., Barton, G. J. & Simpson, G. (Lead / Corresponding author), 6 Nov 2025, In: PLoS Genetics. 21, 11, 29 p., e1011925.Research output: Contribution to journal › Article › peer-review
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Identification of a Highly Cooperative PROTAC Degrader Targeting GTP-loaded KRAS(on) Alleles
Vetma, V., Puoti, I., Karolak, N. K., Chakraborti, S., Diers, E., Girardi, E., Khan, S., Kidd, G., Kropatsch, K. G., Mclennan, R., O'Connor, S., Samwer, M., Trainor, N., Whitworth, C., Wijaya, A. J., Wong, J. Y. F., Zollman, D., Farnaby, W., Popow, J. & Ciulli, A. (Lead / Corresponding author) & 2 others, , 12 Nov 2025, In: Journal of the American Chemical Society. 147, 45, p. 41367-41378 12 p.Research output: Contribution to journal › Article › peer-review
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2024
Confounding Factors in Targeted Degradation of Short-Lived Proteins
Vetma, V., Perez, L. C., Eliaš, J., Stingu, A., Kombara, A., Gmaschitz, T., Braun, N., Ciftci, T., Dahmann, G., Diers, E., Gerstberger, T., Greb, P., Kidd, G., Kofink, C., Puoti, I., Spiteri, V., Trainor, N., Weinstabl, H., Westermaier, Y. & Whitworth, C. & 6 others, , 19 Jul 2024, In: ACS Chemical Biology. 19, 7, p. 1484-1494 11 p.Research output: Contribution to journal › Article › peer-review
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CURTAIN – A unique web-based tool for exploration and sharing of MS-based proteomics data
Phung, T. K. (Lead / Corresponding author), Berndsen, K., Shastry, R., Phan, T. L. C. H. B., Muqit, M. M. K., Alessi, D. R. (Lead / Corresponding author) & Nirujogi, R. S. (Lead / Corresponding author), 13 Feb 2024, In: Proceedings of the National Academy of Sciences. 121, 7, 12 p., e2312376121.Research output: Contribution to journal › Article › peer-review
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Deletion of CD44 promotes adipogenesis by regulating PPARγ and cell cycle-related pathways
Weng, X., Jiang, H., Walker, D. J., Zhou, H., Lin, D., Wang, J. & Kang, L. (Lead / Corresponding author), Jul 2024, In: Journal of Endocrinology. 262, 1, 15 p., e240079.Research output: Contribution to journal › Article › peer-review
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Extensive acute and sustained changes to neutrophil proteomes post-SARS-CoV-2 infection
Long, M. B., Howden, A. J., Keir, H. R., Rollings, C. M., Giam, Y. H., Pembridge, T., Delgado, L., Abo-Leyah, H., Lloyd, A. F., Sollberger, G., Hull, R., Gilmour, A., Hughes, C., New, B. J., Cassidy, D., Shoemark, A., Richardson, H., Lamond, A. I., Cantrell, D. A. & Chalmers, J. D. (Lead / Corresponding author) & 1 others, , 7 Mar 2024, In: The European respiratory journal. 63, 3, 15 p., 2300787.Research output: Contribution to journal › Article › peer-review
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Genome-wide screens connect HD82 loss-of-function to purine analog resistance in African trypanosomes
Trenaman, A., Tinti, M., Atrih, A. & Horn, D. (Lead / Corresponding author), Jan 2024, In: mSphere. 9, 1, 14 p.Research output: Contribution to journal › Article › peer-review
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IL-33-binding HpARI family homologues with divergent effects in suppressing or enhancing type 2 immune responses
Colomb, F., Ogunkanbi, A., Jamwal, A., Dong, B., Maizels, R. M., Finney, C. A. M., Wasmuth, J. D., Higgins, M. K. & McSorley, H. J. (Lead / Corresponding author), Mar 2024, In: Infection and Immunity. 92, 3, e00395-23.Research output: Contribution to journal › Article › peer-review
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Optimizing Spectronaut Search Parameters to Improve Data Quality with Minimal Proteome Coverage Reductions in DIA Analyses of Heterogeneous Samples
Baker, C. P., Bruderer, R., Abbott, J., Arthur, J. S. C. (Lead / Corresponding author) & Brenes Murillo, A. J. (Lead / Corresponding author), 7 Jun 2024, In: Journal of Proteome Research. 23, 6, p. 1926-1936 11 p.Research output: Contribution to journal › Article › peer-review
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RNA polymerase II promotes the organization of chromatin following DNA replication
Bandau, S., Alvarez, V., Jiang, H., Graff, S., Sundaramoorthy, R., Gierlinski, M., Toman, M., Owen-Hughes, T., Sidoli, S., Lamond, A. & Alabert, C. (Lead / Corresponding author), 12 Mar 2024, In: EMBO Reports. 25, 3, p. 1387-1414 28 p.Research output: Contribution to journal › Article › peer-review
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Sterol 14-alpha demethylase (CYP51) activity in Leishmania donovani is likely dependent upon cytochrome P450 reductase 1
Tulloch, L., Tinti, M., Wall, R., Weidt, S. K., Corpas Lopez, V., Dey, G., Smith, T. K., Fairlamb, A., Barrett, M. P. & Wyllie, S. (Lead / Corresponding author), 11 Jul 2024, In: PLoS Pathogens. 20, 7, 23 p., e1012382.Research output: Contribution to journal › Article › peer-review
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TasA fibre interactions are necessary for Bacillus subtilis biofilm structure
Bamford, N., Morris, R. J., Prescott, A., Murphy, P., Erskine, E., MacPhee, C. E. (Lead / Corresponding author) & Stanley-Wall, N. (Lead / Corresponding author), 15 Oct 2024, In: Molecular Microbiology. 122, 4, p. 598-609 12 p.Research output: Contribution to journal › Article › peer-review
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2023
An allele-selective inter-chromosomal protein bridge supports monogenic antigen expression in the African trypanosome
Correia Faria, J. R. (Lead / Corresponding author), Tinti, M., Marques, C. A., Zoltner, M., Yoshikawa, H., Field, M. C. & Horn, D. (Lead / Corresponding author), 11 Dec 2023, In: Nature Communications. 14, 1, 18 p., 8200.Research output: Contribution to journal › Article › peer-review
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A unique mRNA decapping complex in trypanosomes
Kramer, S. (Lead / Corresponding author), Karolak, N. K., Odenwald, J., Gabiatti, B., Castañeda Londoño, P. A., Zavřelová, A., Freire, E. R., Almeida, K. S., Braune, S., Moreira, C., Eder, A., Goos, C., Field, M., Carrington, M., Holetz, F., Górna, M. W. & Zoltner, M. (Lead / Corresponding author), 11 Aug 2023, In: Nucleic Acids Research. 51, 14, p. 7520-7540 21 p.Research output: Contribution to journal › Article › peer-review
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BUB-1 and CENP-C recruit PLK-1 to control chromosome alignment and segregation during meiosis I in C. elegans oocytes
Taylor, S. J. P., Bel Borja, L., Soubigou, F., Houston, J., Cheerambathur, D. K. & Pelisch, F. (Lead / Corresponding author), 17 Apr 2023, In: eLife. 12, 26 p., e84057.Research output: Contribution to journal › Article › peer-review
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Canagliflozin impairs T cell effector function via metabolic suppression in autoimmunity
Jenkins, B. J., Blagih, J., Ponce-Garcia, F. M., Canavan, M., Gudgeon, N., Eastham, S., Hill, D., Hanlon, M. M., Ma, E. H., Bishop, E. L., Rees, A., Cronin, J. G., Jury, E. C., Dimeloe, S. K., Veale, D. J., Thornton, C. A., Vousden, K. H., Finlay, D. K., Fearon, U. & Jones, G. W. & 3 others, , 11 Jul 2023, In: Cell Metabolism. 35, 7, p. 1132-1146 15 p.Research output: Contribution to journal › Article › peer-review
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Characterization of the major surface glycoconjugates of Trypanosoma theileri
Nagar, R., Hambleton, I., Tinti, M., Carrington, M. (Lead / Corresponding author) & Ferguson, M. A. J. (Lead / Corresponding author), Dec 2023, In: Molecular and Biochemical Parasitology. 256, 9 p., 111591.Research output: Contribution to journal › Article › peer-review
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Chemical pulldown combined with mass spectrometry to identify the molecular targets of antimalarials in cell-free lysates
Smith, R. J., Milne, R., Lopez, V. C., Wiedemar, N., Dey, G., Syed, A. J., Patterson, S. (Lead / Corresponding author) & Wyllie, S. (Lead / Corresponding author), 17 Mar 2023, In: STAR Protocols. 4, 1, 30 p., 102002.Research output: Contribution to journal › Article › peer-review
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Cyclin A and Cks1 promote kinase consensus switching to non-proline directed CDK1 phosphorylation
Al-Rawi, A., Kaye, E., Korolchuk, S., Endicott, J. A. & Ly, T. (Lead / Corresponding author), 28 Mar 2023, In: Cell Reports. 42, 3, 21 p., 112139.Research output: Contribution to journal › Article › peer-review
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Mode of action studies confirm on-target engagement of lysyl-tRNA synthetase inhibitor and lead to new selection marker for Cryptosporidium
Hanna, J. C. .., Corpas Lopez, V., Seizova, S., Colon, B. L., Bacchetti, R., Hall, G. M. J., Sands, E. M., Robinson, L., Baragaña, B., Wyllie, S. (Lead / Corresponding author) & Pawlowic, M. (Lead / Corresponding author), 4 Aug 2023, In: Frontiers in Cellular and Infection Microbiology. 13, 14 p., 1236814.Research output: Contribution to journal › Article › peer-review
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Necroptosis inhibition counteracts neurodegeneration, memory decline, and key hallmarks of aging, promoting brain rejuvenation
Arrázola, M. S., Lira, M., Véliz-Valverde, F., Quiroz, G., Iqbal, S., Eaton, S. L., Lamont, D. J., Huerta, H., Ureta, G., Bernales, S., Cárdenas, J. C., Cerpa, W., Wishart, T. M. & Court, F. A. (Lead / Corresponding author), May 2023, In: Aging Cell. 22, 5, 18 p., e13814.Research output: Contribution to journal › Article › peer-review
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Phosphorylation of the N-terminus of Syntaxin-16 controls interaction with mVps45 and GLUT4 trafficking in adipocytes
Bremner, S. K. (Lead / Corresponding author), Berends, R., Kaupisch, A., Roccisana, J., Sutherland, C., Bryant, N. J. & Gould, G. W., 24 Jul 2023, In: PeerJ. 11, 22 p., e15630.Research output: Contribution to journal › Article › peer-review
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Structure-based design of a phosphotyrosine-masked covalent ligand targeting the E3 ligase SOCS2
Ramachandran, S., Makukhin, N., Haubrich, K., Nagala, M., Forrester, B., Lynch, D. M., Casement, R., Testa, A., Bruno, E., Gitto, R. & Ciulli, A. (Lead / Corresponding author), 10 Oct 2023, In: Nature Communications. 14, 17 p., 6345.Research output: Contribution to journal › Article › peer-review
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The accessory protein TagV is required for full Type VI secretion system activity in Serratia marcescens
Reglinski, M., Monlezun, L. & Coulthurst, S. J. (Lead / Corresponding author), Mar 2023, In: Molecular Microbiology. 119, 3, p. 326-339 14 p.Research output: Contribution to journal › Article › peer-review
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The proliferation of human mucosal-associated invariant T cells requires a MYC-SLC7A5-glycolysis metabolic axis
Kedia-Mehta, N., Pisarska, M. M., Rollings, C., O'Neill, C., De Barra, C., Foley, C., Wood, N. A. W., Wrigley-Kelly, N., Veerapen, N., Besra, G., Bergin, R., Jones, N., O'Shea, D., Sinclair, L. V. (Lead / Corresponding author) & Hogan, A. E. (Lead / Corresponding author), 18 Apr 2023, In: Science Signaling. 16, 781, 13 p., eabo2709.Research output: Contribution to journal › Article › peer-review
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2022
A mechanism for exocyst-mediated tethering via Arf6 and PIP5K1C-driven phosphoinositide conversion
Maib, H. & Murray, D. H. (Lead / Corresponding author), 11 Jul 2022, In: Current Biology. 32, 13, p. 2821-2833.E6 13 p.Research output: Contribution to journal › Article › peer-review
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A selective and orally bioavailable VHL-recruiting PROTAC achieves SMARCA2 degradation in vivo
Kofink, C., Trainor, N., Mair, B., Wöhrle, S., Wurm, M., Mischerikow, N., Roy, M. J., Bader, G., Greb, P., Garavel, G., Diers, E., McLennan, R., Whitworth, C., Vetma, V., Rumpel, K., Scharnweber, M., Fuchs, J. E., Gerstberger, T., Cui, Y. & Gremel, G. & 10 others, , 10 Oct 2022, In: Nature Communications. 13, 15 p., 5969.Research output: Contribution to journal › Article › peer-review
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Caspase cleavage and nuclear retention of the energy sensor AMPK-α1 during apoptosis
Cheratta, A. R., Thayyullathil, F., Hawley, S. A., Ross, F. A., Atrih, A., Lamont, D. J., Pallichankandy, S., Subburayan, K., Alakkal, A., Rezgui, R., Gray, A., Hardie, D. G. & Galadari, S. (Lead / Corresponding author), 3 May 2022, In: Cell Reports. 39, 5, 18 p., 110761.Research output: Contribution to journal › Article › peer-review
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Concomitant deletion of Ptpn6 and Ptpn11 in T cells fails to improve anticancer responses
Ventura, P. M. O., Gakovic, M., Fischer, B. A., Spinelli, L., Rota, G., Pathak, S., Khameneh, H. J., Zenobi, A., Thomson, S., Birchmeier, W., Cantrell, D. A. (Lead / Corresponding author) & Guarda, G. (Lead / Corresponding author), 7 Nov 2022, In: EMBO Reports. 23, 11, 11 p., e55399.Research output: Contribution to journal › Article › peer-review
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Control of variant surface glycoprotein expression by CFB2 in Trypanosoma brucei and quantitative proteomic connections to translation and cytokinesis
Bravo Ruiz, G., Tinti, M., Ridgway, M. & Horn, D. (Lead / Corresponding author), Apr 2022, In: mSphere. 7, 2, 14 p., e00069-22.Research output: Contribution to journal › Article › peer-review
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CRISPR/Cas9-based precision tagging of essential genes in bloodstream form African trypanosomes
Kovářová, J., Novotná, M., Faria, J., Rico, E., Wallace, C., Zoltner, M., Field, M. C. & Horn, D. (Lead / Corresponding author), 10 Apr 2022, In: Molecular and Biochemical Parasitology. 249, 7 p., 111476.Research output: Contribution to journal › Article › peer-review
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Identification of a proteasome-targeting arylsulfonamide with potential for the treatment of Chagas' disease
Lima, M., Tulloch, L., Corpas Lopez, V., Carvalho, S., Wall, R., Milne, R., Rico Vidal, E., Patterson, S., Gilbert, I., Moniz, S., MacLean, L., Torrie, L., Morgillo, C., Horn, D., Zuccotto, F. & Wyllie, S. (Lead / Corresponding author), 18 Jan 2022, In: Antimicrobial Agents and Chemotherapy. 66, 1, 16 p., e01535-21.Research output: Contribution to journal › Article › peer-review
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m6A modification of U6 snRNA modulates usage of two major classes of pre-mRNA 5' splice site
Parker, M. T., Soanes, B. K., Kusakina, J., Larrieu, A., Knop, K., Joy, N., Breidenbach, F., Sherwood, A. V., Barton, G. J., Fica, S. M., Davies, B. H. (Lead / Corresponding author) & Simpson, G. G. (Lead / Corresponding author), 30 Dec 2022, In: eLife. 11, 34 p., e78808.Research output: Contribution to journal › Article › peer-review
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Proteomics uncovers novel components of an interactive protein network supporting RNA export in trypanosomes
Inoue, A. H., Domingues, P. F., Serpeloni, M., Hiraiwa, P. M., Vidal, N. M., Butterfield, E. R., Del Pino, R. C., Ludwig, A., Boehm, C., Field, M. C. & Ávila, A. R. (Lead / Corresponding author), 1 Mar 2022, In: Molecular & Cellular Proteomics. 21, 3, 25 p., 100208.Research output: Contribution to journal › Article › peer-review
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Quantitative Proteomics of Polarised Macrophages Derived from Induced Pluripotent Stem Cells
Murugesan, G., Davidson, L., Jannetti, L., Crocker, P. R. & Weigle, B. (Lead / Corresponding author), 23 Jan 2022, In: Biomedicines. 10, 2, p. 1-19 19 p., 239.Research output: Contribution to journal › Article › peer-review
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2021
Activation of regulatory T cells triggers specific changes in glycosylation associated with Siglec-1-dependent inflammatory responses
Wu, G., Murugesan, G., Nagala, M., McCraw, A., Haslam, S. M., Dell, A. & Crocker, P. R. (Lead / Corresponding author), 1 Jun 2021, In: Wellcome Open Research. 6, 30 p., 134.Research output: Contribution to journal › Article › peer-review
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Acute depletion of the ARID1A subunit of SWI/SNF complexes reveals distinct pathways for activation and repression of transcription
Blümli, S., Wiechens, N., Wu, M.-Y., Singh, V., Gierlinski, M., Schweikert, G., Gilbert, N., Naughton, C., Sundaramoorthy, R., Varghese, J., Gourlay, R., Soares, R., Clark, D. & Owen-Hughes, T. (Lead / Corresponding author), 2 Nov 2021, In: Cell Reports. 37, 5, 17 p., 109943.Research output: Contribution to journal › Article › peer-review
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Aurora B switches relative strength of kinetochore–microtubule attachment modes for error correction
Doodhi, H. (Lead / Corresponding author), Kasciukovic, T., Clayton, L. & Tanaka, T. U. (Lead / Corresponding author), 7 Jun 2021, In: Journal of Cell Biology. 220, 6, 14 p., e202011117.Research output: Contribution to journal › Article › peer-review
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Development of BromoTag: A “Bump-&-Hole”-PROTAC system to induce potent, rapid, and selective degradation of tagged target proteins
Bond, A. G., Craigon, C., Chan, K. H., Testa, A., Karapetsas, A., Fasimoye, R., Macartney, T., Blow, J. J., Alessi, D. R. & Ciulli, A. (Lead / Corresponding author), 28 Oct 2021, In: Journal of Medicinal Chemistry. 64, 20, p. 15477-15502 26 p.Research output: Contribution to journal › Article › peer-review
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DNDI-6148: A novel benzoxaborole preclinical candidate for the treatment of visceral leishmaniasis
Mowbray, C. E. (Lead / Corresponding author), Braillard, S., Glossop, P. A., Whitlock, G. A., Jacobs, R. T., Speake, J., Pandi, B., Nare, B., Maes, L., Yardley, V., Freund, Y., Wall, R. J., Carvalho, S., Bello, D., Van den Kerkhof, M., Caljon, G., Gilbert, I. H., Corpas-Lopez, V., Lukac, I. & Patterson, S. & 2 others, , 11 Nov 2021, In: Journal of Medicinal Chemistry. 64, 21, p. 16159-16176 18 p.Research output: Contribution to journal › Article › peer-review
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Profiling the Proteome of Cyst Nematode-Induced Syncytia on Tomato Roots
Filipecki, M. (Lead / Corresponding author), Żurczak, M., Matuszkiewicz, M., Święcicka, M., Kurek, W., Olszewski, J., Koter, M. D., Lamont, D. & Sobczak, M., 10 Nov 2021, In: International Journal of Molecular Sciences. 22, 22, p. 1-13 13 p., 12147.Research output: Contribution to journal › Article › peer-review
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Quantitative Analyses Reveal How Hypoxia Reconfigures the Proteome of Primary Cytotoxic T Lymphocytes
Ross, S. H. (Lead / Corresponding author), Rollings, C. M. & Cantrell, D. A., 17 Sept 2021, In: Frontiers in Immunology. 12, 18 p., 712402.Research output: Contribution to journal › Article › peer-review
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Role of Protein in Fungal Biomineralization of Copper Carbonate Nanoparticles
Liu, F., Shah, D. S. & Gadd, G. M. (Lead / Corresponding author), 25 Jan 2021, In: Current biology : CB. 31, 2, p. 358-368.e3 11 p.Research output: Contribution to journal › Article › peer-review
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The citron homology domain as a scaffold for Rho1 signaling
Bartual, S. G., Wei, W., Zhou, Y., Pravata, V. M., Fang, W., Yan, K., Ferenbach, A. T., Lockhart, D. E. A. & van Aalten, D. M. F. (Lead / Corresponding author), 28 Sept 2021, In: Proceedings of the National Academy of Sciences of the United States of America. 118, 39, 10 p., e2110298118.Research output: Contribution to journal › Article › peer-review
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The distinctive flagellar proteome of Euglena gracilis illuminates the complexities of protistan flagella adaptation
Hammond, M., Zoltner, M., Garrigan, J., Butterfield, E., Varga, V., Lukeš, J. & Field, M. C. (Lead / Corresponding author), Nov 2021, In: New Phytologist. 232, 3, p. 1323-1336 14 p.Research output: Contribution to journal › Article › peer-review
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The role of DDK and Treslin-MTBP in coordinating replication licensing and pre-Initiation Complex formation
Volpi, I., Gillespie, P. J., Chadha, G. S. & Blow, J. (Lead / Corresponding author), Oct 2021, In: Open Biology. 11, 10, 18 p., 210121.Research output: Contribution to journal › Article › peer-review
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Trivalent PROTACs enhance protein degradation via combined avidity and cooperativity
Imaide, S., Riching, K. M., Makukhin, N., Vetma, V., Whitworth, C., Hughes, S. J., Trainor, N., Mahan, S. D., Murphy, N., Cowan, A., Chan, K.-H., Craigon, C., Test, A., Maniai, C., Urh, M., Daniels, D. L. & Ciulli, A. (Lead / Corresponding author), Nov 2021, In: Nature Chemical Biology. 17, 11, p. 1157-1167 11 p.Research output: Contribution to journal › Article › peer-review
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