Projects per year
Fingerprint
Collaborations and top research areas from the last five years
Profiles
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Abbott, James
- Computational Biology - Senior Lecturer (Teaching and Scholarship), Data Analysis and Bioinformatics Group Manager
Person: Research, Academic
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Green PROTACs – enabling small molecule (re)programming and manipulation of plant biology
Ciulli, A. (Investigator), Drost, H. (Investigator), Hemsley, P. (Investigator) & Zachariae, U. (Investigator)
1/10/25 → 3/03/27
Project: Research
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The Dundee Resource for Sequence Analysis and Structure Prediction (DRSASP) - 2023 and Beyond
Abbott, J. (Investigator), Barton, G. (Investigator) & MacGowan, S. (Investigator)
Biotechnology and Biological Sciences Research Council
1/09/24 → 31/08/28
Project: Research
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Aberrant NSUN1 Activity Connects m5C RNA Modification to TDP-43 Neurotoxicity in ALS/FTD
Parra-Torres, M., Dissanayake, K., Gray, J. A., Langlands, A. J., Kucuk, R., Gierlinski, M., Troakes, C., King, A. & McGurk, L. (Lead / Corresponding author), Jan 2026, In: Life Science Alliance. 9, 1, 25 p., e202503297.Research output: Contribution to journal › Article › peer-review
Open AccessFile39 Downloads (Pure) -
Acinetobacter enrichment shapes composition and function of the bacterial microbiota of field-grown tomato plants
Robertson, S., Mosca, A., Ashraf, S., Corral, A., Alegria Terrazas, R., Arnton, C., Thorpe, P., Morris, J. A., Hedley, P. E., Babbi, G., Savojardo, C., Martelli, P. L., Møller, F. D., Nielsen, H. N., Leekitcharoenphon, P., Aarestrup, F. M., Halder, R., Laczny, C. C., Wilmes, P. & Pietrantonio, L. & 4 others, , 15 Jan 2026, (E-pub ahead of print) In: mSphere. 11, 2, p. 1-21 21 p., e00842-25.Research output: Contribution to journal › Article › peer-review
Open AccessFile2 Link opens in a new tab Citations (Scopus)33 Downloads (Pure) -
A Novel Chitinase-Like Family of Candidate Effectors Unique to Aphids
Lopez-Cobollo, R. M., Altmann, S., Thorpe, P., Douglas, N., Shih, P.-Y., Eccleston, L., Lord, M., Hong, E., Klug, E., Iqbal, J., Bos, J. (Lead / Corresponding author), Carolan, J. C. (Lead / Corresponding author) & Turnbull, C. (Lead / Corresponding author), 28 Feb 2026, In: Molecular Plant - Microbe Interactions. 39, 1, p. 102-113 12 p.Research output: Contribution to journal › Article › peer-review
Open AccessFile3 Link opens in a new tab Citations (Scopus)56 Downloads (Pure)
Datasets
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Genome sequence data and genome annotation data
Stanley-Wall, N. (Creator), Kalamara, M. (Creator) & Abbott, J. (Creator), University of Dundee, 2022
https://www.ebi.ac.uk/ena/browser/view/PRJEB43128
Dataset
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Additional file 6 of Characterization of the transposable element landscape shaping the Ectocarpus genome
Dinatale, E. (Creator), Craig, R. J. (Creator), Martinho, C. (Creator), Drost, H.-G. (Creator) & Coelho, S. M. (Creator), figshare, 29 Sept 2025
DOI: 10.6084/m9.figshare.30239823, https://springernature.figshare.com/articles/dataset/Additional_file_6_of_Characterization_of_the_transposable_element_landscape_shaping_the_Ectocarpus_genome/30239823
Dataset
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bartongroup/FRAGSYS: Second release
Utgés, J. S. (Creator), Zenodo, 1 Feb 2024
DOI: 10.5281/zenodo.10606595, https://zenodo.org/records/10606595
Dataset
Prizes
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2024 Stephen Fry Public Engagement Awards - Engaged Researcher of the Year
Duce, S. (Recipient), 5 Jan 2024
Prize: Prize (including medals and awards)
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Neglected Tropical Diseases Festival Art Award
Duce, S. (Recipient), Mar 2018
Prize: Prize (including medals and awards)
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Neglected Tropical Diseases Festival Writing Award
Duce, S. (Recipient), Mar 2019
Prize: Prize (including medals and awards)
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Night at the Botanics 2026
Martin, D. (Member)
24 Apr 2026 → 13 Nov 2026Activity: Other activity types › Citizen Science
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Bird detection with AI
Martin, D. (Presenter)
19 May 2026Activity: Other activity types › Schools engagement
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Mearns Academy visit to the James Hutton Institute
Macaulay, M. (Organiser), McCallum, N. (Speaker), Keith, R. (Speaker), Bulgarelli, D. (Speaker), Martin, D. (Speaker) & Hormuzdi, S. (Speaker)
31 Aug 2026Activity: Other activity types › Schools engagement
Student theses
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Analysis and Prediction of Protein Structure
Barber, J. (Author), Barton, G. (Supervisor), 2005Student thesis: Doctoral Thesis › Doctor of Philosophy
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Analysis of variation in protein domain families and interfaces
Marques Madeira, F. M. (Author), Barton, G. (Supervisor), 2016Student thesis: Doctoral Thesis › Doctor of Philosophy
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Characterisation of the TET2 Interaction Network: Implications for Development and Haematopoiesis
Li, X. (Author), Rasmussen, K. (Supervisor) & Schweikert, G. (Supervisor), 2026Student thesis: Doctoral Thesis › Doctor of Philosophy
File
Equipment
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Dundee Resource for Sequence Analysis and Structure Prediction (DRSASP)
Barton, G. (Other) & Procter, J. (Other)
Computational BiologyFacility/equipment: Facility
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