Projects per year
Fingerprint
Network
Profiles
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Abbott, James
- Computational Biology - Data Analysis and Bioinformatics Group Manager
- DArcy Thompson Unit - Senior Lecturer (Teaching and Scholarship)
Person: Research, Academic
Research output
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Active and adaptive plasticity in a changing climate
Brooker, R., Brown, L. K., George, T. S., Pakeman, R. J., Palmer, S., Ramsay, L., Schöb, C., Schurch, N. & Wilkinson, M. J., 1 Jul 2022, In: Trends in Plant Science. 27, 7, p. 717-728 12 p.Research output: Contribution to journal › Review article › peer-review
Open AccessFile1 Citation (Scopus) -
An unconventionally secreted effector from the root knot nematode Meloidogyne incognita, Mi-ISC-1, promotes parasitism by disrupting salicylic acid biosynthesis in host plants
Qin, X., Xue, B., Tian, H., Fang, C., Yu, J., Chen, C., Xue, Q., Jones, J. & Wang, X., Apr 2022, In: Molecular Plant Pathology. 23, 4, p. 516-529 14 p.Research output: Contribution to journal › Article › peer-review
Open AccessFile21 Downloads (Pure) -
BaRTv2: A highly resolved barley reference transcriptome for accurate transcript-specific RNA-seq quantification
Coulter, M., Entizne, J. C., Guo, W., Bayer, M., Wonneberger, R., Milne, L., Schreiber, M., Haaning, A., Muehlbauer, G., McCallum, N., Fuller, J., Simpson, C., Stein, N., Brown, J. W. S., Waugh, R. & Zhang, R., 15 Jun 2022, (E-pub ahead of print) In: Plant Journal. 47 p.Research output: Contribution to journal › Article › peer-review
Datasets
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Study of genome-wide alternative polyadenylation in A. thaliana
Sherstnev, A. (Creator), Duc, C. (Creator), Cole, C. (Creator), Zacharaki, V. (Creator), Hornyik, C. (Creator), Ozsolak, F. (Creator), Milos, P. M. (Creator), Barton, G. (Creator) & Simpson, G. (Creator), European Nucleotide Archive, 18 Jan 2012
http://www.ebi.ac.uk/ena/data/view/ERP001018
Dataset
Prizes
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Cancer Research UK Career Establishment Award
Matthews, Sharon (Recipient), 1 Jun 2009
Prize: Fellowship awarded competitively
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Fellow of Royal Society of Biology
Woof, Jennifer (Recipient), 2013
Prize: Election to learned society
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Fellow of the Royal Society of Biology
Martin, David (Recipient), 2014
Prize: Election to learned society
Activities
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The Last Mill
Dan Simpson (Contributor), Senga Robertson-Albertyn (Contributor), Toan Phung (Contributor), Ailsa Mackintosh (Contributor), Dmitry Finkelbergs (Contributor), Ali Floyd (Contributor), Gabriela Mol Avelar Tamaki (Contributor), Melanie Ridgway (Contributor), Julie Brady (Contributor), Rafael Monteiro Do Carmo (Contributor), Claire Hepburn (Contributor), Frederick Simeons (Contributor), Xiao Hu (Contributor), Taciana Kasciukovic (Contributor) & Arnold Forkuo (Contributor)
2022Activity: Other activity types › Public engagement and outreach - festival/exhibition
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Plant Power 2021
Jorunn Bos (Organiser), Kevin Frediani (Organiser), Neil Paterson (Contributor), Carmen Escudero-Martinez (Contributor), Senga Robertson-Albertyn (Contributor), Dionne Turnbull (Contributor), Davide Bulgarelli (Contributor), Aileen Mary Corral (Contributor), Rodrigo Alegria Terrazas (Contributor), Lynn Brown (Contributor), Robbie Waugh (Contributor), Dominika Lewandowska (Organiser), Sebastian Raubach (Contributor), Petra Boevink (Contributor), Louise Gamble (Contributor), Craig G. Simpson (Contributor), Isabelle Colas (Contributor), Girma Fana (Contributor) & Amy Cameron (Contributor)
15 May 2021 → 23 May 2021Activity: Other activity types › Public engagement and outreach - festival/exhibition
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Family Fun with Women in STEM - Dundee Women's Festival 2020
Amy Cameron (Organiser), Amy Rogers (Organiser), Rolf Black (Organiser), Elizabeth Mills (Presenter), Melissa D'Ascenzio (Presenter), Aurora Sicilia Aguilar (Presenter), Suzanne Duce (Presenter), Carmen Escudero-Martinez (Presenter), Simone Altmann (Presenter), Daniella Cavellini (Presenter), Evelien Rooke (Presenter), Giorgia De Paoli (Presenter), Seaneen McDougall (Presenter), Katie Larner (Presenter), Julieta Gomez Garcia-Donas (Presenter) & Anne Keitel (Presenter)
1 Mar 2020Activity: Other activity types › Other
Press / Media
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Stephen Fry Awards for immunology researcher and street children project
Janine Hunter, Lorraine van Blerk & Jenny Woof
13/01/17
1 item of Media coverage
Press/Media: Research
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WATCH: Stephen Fry congratulates Dundee academics for awards victories
Lorraine van Blerk, Janine Hunter & Jenny Woof
13/01/17
1 item of Media coverage
Press/Media: Research
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Students use Irn Bru to replace a laboratory stain
13/04/16
1 item of Media coverage
Press/Media: Teaching
Student theses
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Approaches to understanding diversity in rubber and carotenoid synthesis in Hevea brasiliensis latex
Author: Bahari, A., 2019Supervisor: Marshall, D. (Supervisor), Taylor, M. (Supervisor), Chow, K. (External person) (Supervisor), Campbell, R. (External person) (Supervisor) & Halpin, C. (Supervisor)
Student thesis: Doctoral Thesis › Doctor of Philosophy
File -
Automated generation of high quality transcriptome annotations and their coding characterisation
Author: Entizne, J. C., 2021Supervisor: Brown, J. (Supervisor) & Zhang, R. (Supervisor)
Student thesis: Doctoral Thesis › Doctor of Philosophy
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Computational analysis and method development for high throughput transcriptomics and transcriptional regulatory inference in plants
Author: Guo, W., 2018Supervisor: Zhang, R. (Supervisor), Brown, J. (Supervisor), Waugh, R. (Supervisor) & Lin, P. (Supervisor)
Student thesis: Doctoral Thesis › Doctor of Philosophy