DArcy Thompson Unit

Research Output 1987 2019

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2019
19 Downloads (Pure)

A comparison of mainstream genotyping platforms for the evaluation and use of barley genetic resources

Darrier, B., Russell, J., Milner, S. G., Hedley, P. E., Shaw, P. D., Macaulay, M., Ramsay, L., Halpin, C., Mascher, M., Fleury, D. L., Langridge, P., Stein, N. & Waugh, R., 26 Apr 2019, In : Frontiers in Plant Science. 10, p. 1-14 14 p., 544.

Research output: Contribution to journalArticle

Open Access
File
genetic resources
genotyping
single nucleotide polymorphism
barley
gene frequency
8 Downloads (Pure)

A highly mutagenised barley (cv. Golden Promise) TILLING population coupled with strategies for screening-by-sequencing

Schreiber, M., Barakate, A., Uzrek, N., Macaulay, M., Sourdille, A., Morris, J., Hedley, P. E., Ramsay, L. & Waugh, R., 24 Aug 2019, In : Plant Methods. 15, p. 1-14 14 p., 99.

Research output: Contribution to journalArticle

Open Access
File
Hordeum
barley
screening
mutation
Mutation
1 Citation (Scopus)
25 Downloads (Pure)

Antigen receptor control of methionine metabolism in T cells

Sinclair, L. V., Howden, A., Brenes Murillo, A., Spinelli, L., Hukelmann, J., Macintyre, A. N., Liu, X., Thomson, S., Taylor, P., Rathmell, J. C., Locasale, J. W., Lamond, A. & Cantrell, D. A., 27 Mar 2019, In : eLife. 8, 29 p., e44210.

Research output: Contribution to journalArticle

Open Access
File
Antigen Receptors
T-cells
Metabolism
Methionine
T-Lymphocytes
37 Downloads (Pure)

Application of a Sensitive and Reproducible Label-Free Proteomic Approach to Explore the Proteome of Individual Meiotic-Phase Barley Anthers

Lewandowska, D., Zhang, R., Colas, I., Uzrek, N. & Waugh, R., 2 Apr 2019, In : Frontiers in Plant Science. 10, p. 1-15 15 p., 393.

Research output: Contribution to journalArticle

Open Access
File
proteome
proteomics
anthers
meiosis
barley
27 Downloads (Pure)

AVR2 targets BSL family members, which act as susceptibility factors to suppress host immunity

Turnbull, D., Wang, H., Breen, S., Malec, M., Naqvi, S., Yang, L., Welsh, L., Hemsley, P. A., Zhendong, T., Brunner, F., Gilroy, E. M. & Birch, P. R. J., 1 May 2019, In : Plant Physiology. 180, 1, p. 571-581 11 p.

Research output: Contribution to journalArticle

Open Access
File
Phytophthora infestans
Immunity
immunity
Solanum tuberosum
Brassinosteroids
17 Downloads (Pure)

Catalytic deficiency of O-GlcNAc transferase leads to X-linked intellectual disability

Pravata, V., Muha, V., Gundogdu, M., Ferenbach, A., Kakade, P., Vandadi, V., Wilmes, A. C., Borodkin, V., Joss, S., Stavridis, M. & van Aalten, D., 23 Jul 2019, In : Proceedings of the National Academy of Sciences. 116, 30, p. 14961-14970 10 p.

Research output: Contribution to journalArticle

Open Access
File
Intellectual Disability
Host Factor 1 Protein
Missense Mutation
Proteome
Catalytic Domain
84 Downloads (Pure)

CDK7 is a component of the integrated stress response regulating SNAT2 (SLC38A2)/System A adaptation in response to cellular amino acid deprivation

Stretton, C., Lipina, C., Hyde, R., Cwiklinski, E., Hoffmann, T. M., Taylor, P. M. & Hundal, H. S., 1 Jun 2019, In : Biochimica et Biophysica Acta. Molecular Cell Research. 1866, 6, p. 978-991 14 p.

Research output: Contribution to journalArticle

Open Access
File
Activating Transcription Factor 4
Amino Acids
Cyclin-Dependent Kinases
alvocidib
Phosphotransferases

Characterisation of barley resistance to rhynchosporium on chromosome 6HS

Coulter, M., Büttner, B., Hofmann, K., Bayer, M., Ramsay, L., Schweizer, G., Waugh, R., Looseley, M. E. & Avrova, A., Apr 2019, In : Theoretical and Applied Genetics. 132, 4, p. 1089-1107 19 p.

Research output: Contribution to journalArticle

Rhynchosporium
Hordeum
Chromosomes
barley
chromosomes
20 Downloads (Pure)

Cold-Dependent Expression and Alternative Splicing of Arabidopsis Long Non-coding RNAs

Calixto, C., Tzioutziou, N., James, A. B., Hornyik, C., Guo, W., Zhang, R., Nimmo, H. G. & Brown, J., 28 Feb 2019, In : Frontiers in Plant Science. 10, p. 1-16 16 p., 235.

Research output: Contribution to journalArticle

Open Access
File
alternative splicing
Arabidopsis
small interfering RNA
time series analysis
temperature
1 Citation (Scopus)
32 Downloads (Pure)

desynaptic5 carries a spontaneous semi-dominant mutation affecting Disrupted Meiotic cDNA 1 in barley

Colas, I., Barakate, A., Macaulay, M., Schreiber, M., Stephens, J., Vivera, S., Halpin, C., Waugh, R. & Ramsay, L., 1 May 2019, In : Journal of Experimental Botany. 70, 10, p. 2683-2698 16 p.

Research output: Contribution to journalArticle

Open Access
File
Hordeum
Genetic Recombination
Complementary DNA
barley
chromosomes
11 Downloads (Pure)

Development and Quality of Barley Husk Adhesion Correlates With Changes in Caryopsis Cuticle Biosynthesis and Composition

Brennan, M., Hedley, P. E., Topp, C. F. E., Morris, J., Ramsay, L., Mitchell, S., Shepherd, T., Thomas, W. T. B. & Hoad, S. P., 24 May 2019, In : Frontiers in Plant Science. 10, p. 1-15 15 p., 672.

Research output: Contribution to journalArticle

Open Access
File
hulls
adhesion
skinning
barley
biosynthesis
50 Downloads (Pure)

Escherichia coli O157:H7 transcriptome datasets for comparison of RNA-seq and microarray platforms

Grabowiecka, E., Martin, D., Crozier, L. & Holden, N., Feb 2019, In : Data in Brief. 22, p. 126-131 6 p.

Research output: Contribution to journalArticle

Open Access
File
Escherichia coli O157
Transcriptome
RNA
High-Throughput Nucleotide Sequencing
Spinacia oleracea
1 Citation (Scopus)
17 Downloads (Pure)

Exome sequences and multi-environment field trials elucidate the genetic basis of adaptation in barley

Bustos-Korts, D., Dawson, I. K., Russell, J., Tondelli, A., Guerra, D., Ferrandi, C., Strozzi, F., Nicolazzi, E. L., Molnar-Lang, M., Ozkan, H., Megyeri, M., Miko, P., Çakır, E., Yakışır, E., Trabanco, N., Delbono, S., Kyriakidis, S., Booth, A., Cammarano, D., Mascher, M. & 7 others, Werner, P., Cattivelli, L., Rossini, L., Stein, N., Kilian, B., Waugh, R. & van Eeuwijk, F. A., 13 Sep 2019, In : Plant Journal. 99, 6, p. 1172-1191 20 p.

Research output: Contribution to journalArticle

Open Access
File
Exome
Hordeum
field experimentation
barley
Climate Change
1 Citation (Scopus)
61 Downloads (Pure)

Insights into evolving global populations of Phytophthora infestans via new complementary mtDNA haplotype markers and nuclear SSRs

Martin, F. N., Zhang, Y., Cooke, D. E. L., Coffey, M. D., Grünwald, N. J. & Fry, W. E., 2 Jan 2019, In : PLoS ONE. 14, 1, p. 1-24 24 p., e0208606.

Research output: Contribution to journalArticle

Open Access
File
Phytophthora infestans
Mitochondrial DNA
Haplotypes
haplotypes
mitochondrial DNA
55 Downloads (Pure)

Limited effects of the maternal rearing environment on the behaviour and fitness of an insect herbivore and its natural enemy

Slater, J. M., Gilbert, L., Johnson, D. & Karley, A. J., 11 Jan 2019, In : PLoS ONE. 14, 1, p. 1-19 19 p., e0209965.

Research output: Contribution to journalArticle

Open Access
File
Aphids
Herbivory
maternal effect
natural enemies
Insects
59 Downloads (Pure)

Mapping the H2 resistance effective against Globodera pallida pathotype Pa1 in tetraploid potato

Strachan, S. M. ., Armstrong, M. R., Kaur, A., Wright, K. M., Lim, T. Y., Jones, J., Bryan, G. J., Blok, V. & Hein, I., Apr 2019, In : Theoretical and Applied Genetics. 132, 4, p. 1283-1294 12 p.

Research output: Contribution to journalArticle

Open Access
File
Globodera pallida
Tetraploidy
pathotypes
Solanum tuberosum
tetraploidy
18 Downloads (Pure)

Metabarcoding reveals a high diversity of woody host-associated Phytophthora spp. in soils at public gardens and amenity woodlands in Britain

Riddell, C. E., Frederickson-Matika, D., Armstrong, A. C., Elliot, M., Forster, J., Hedley, P. E., Morris, J., Thorpe, P., Cooke, D. E. L., Pritchard, L., Sharp, P. M. & Green, S., 16 May 2019, In : PeerJ. 7, p. 1-31 31 p., e6931.

Research output: Contribution to journalArticle

Open Access
File
public gardens
Phytophthora
United Kingdom
woodlands
Soil
5 Citations (Scopus)
62 Downloads (Pure)

Phytophthora infestans RXLR effectors act in concert at diverse subcellular locations to enhance host colonization

Wang, S., McLellan, H., Bukharova, T., He, Q., Murphy, F., Shi, J., Sun, S., van Weymers, P., Ren, Y., Thilliez, G., Wang, H., Chen, X., Engelhardt, S., Vleeshouwers, V., Gilroy, E. M., Whisson, S. C., Hein, I., Wang, X., Tian, Z., Birch, P. R. J. & 1 others, Boevink, P. C., 1 Jan 2019, In : Journal of Experimental Botany. 70, 1, p. 343-356 14 p., ery360.

Research output: Contribution to journalArticle

Open Access
File
Phytophthora infestans
Nicotiana benthamiana
Tobacco
pathogens
Infection
1 Citation (Scopus)
36 Downloads (Pure)

Pinus Susceptibility to Pitch Canker Triggers Specific Physiological Responses in Symptomatic Plants: An Integrated Approach

Amaral, J., Correia, B., António, C., Rodrigues, A. M., Gómez-Cadenas, A., Valledor, L., Hancock, R. D., Alves, A. & Pinto, G., 24 Apr 2019, In : Frontiers in Plant Science. 10, p. 1-16 16 p., 509.

Research output: Contribution to journalArticle

Open Access
File
plant response
Pinus
Pinus pinea
Fusarium circinatum
Pinus pinaster
3 Citations (Scopus)
55 Downloads (Pure)

RNAi-suppression of barley caffeic acid O-methyltransferase modifies lignin despite redundancy in the gene family

Daly, P., McClellan, C., Maluk, M., Oakey, H., Lapierre, C., Waugh, R., Stephens, J., Marshall, D., Barakate, A., Tsuji, Y., Goeminne, G., Vanholme, R., Boerjan, W., Ralph, J. & Halpin, C., Mar 2019, In : Plant Biotechnology Journal. 17, 3, p. 594-607 14 p.

Research output: Contribution to journalArticle

Open Access
File
caffeate O-methyltransferase
Lignin
Hordeum
caffeic acid
RNA Interference

The L-type amino acid transporter LAT1 inhibits osteoclastogenesis and maintains bone homeostasis through the mTORC1 pathway

Ozaki, K., Yamada, T., Horie, T., Ishizaki, A., Hiraiwa, M., Iezaki, T., Park, G., Fukasawa, K., Kamada, H., Tokumura, K., Motono, M., Kaneda, K., Ogawa, K., Ochi, H., Sato, S., Kobayashi, Y., Shi, Y-B., Taylor, P. M. & Hinoi, E., 9 Jul 2019, In : Science Signaling. 12, 589, p. 1-14 14 p., aaw3921.

Research output: Contribution to journalArticle

Amino Acid Transport Systems
Osteoclasts
Osteogenesis
Bone
Homeostasis
1 Citation (Scopus)

Tracing the ancestry of modern bread wheats

Pont, C., Leroy, T., Seidel, M., Tondelli, A., Duchemin, W., Armisen, D., Lang, D., Bustos-Korts, D., Goué, N., Balfourier, F., Molnár-Láng, M., Lage, J., Kilian, B., Özkan, H., Waite, D., Dyer, S., Letellier, T., Alaux, M., Russell, J., Keller, B. & 9 others, van Eeuwijk, F., Spannagl, M., Mayer, K. F. X., Waugh, R., Stein, N., Cattivelli, L., Haberer, G., Charmet, G. & Salse, J., 1 May 2019, In : Nature Genetics. 51, 5, p. 905-911 7 p.

Research output: Contribution to journalArticle

Bread
Triticum
Exome
Civilization
Breeding
2018
1 Citation (Scopus)
48 Downloads (Pure)

Absence of curli in soil-persistent Escherichia coli is mediated by a C-di-GMP signaling defect and suggests evidence of biofilm-independent niche specialization

Somorin, Y. M., Vollmerhausen, T., Waters, N., Pritchard, L., Abram, F., Brennan, F. & O'Byrne, C., 22 Jun 2018, In : Frontiers in Microbiology. 9, p. 1-13 13 p., 1340.

Research output: Contribution to journalArticle

Open Access
File
Biofilms
Soil
Escherichia coli
Quartz
Enterobacteriaceae

Ancient barley landraces adapted to marginal soils demonstrate exceptional tolerance to manganese limitation

Schmidt, S. B., George, T. S., Brown, L. K., Booth, A., Wishart, J., Hedley, P. E., Martin, P., Russell, J. & Husted, S., 15 Dec 2018, In : Annals of Botany.

Research output: Contribution to journalArticle

landraces
manganese
barley
soil
grain yield
3 Citations (Scopus)
49 Downloads (Pure)

A reversible light- and genotype-dependent acquired thermotolerance response protects the potato plant from damage due to excessive temperature

Trapero-Mozos, A., Ducreux, L. J. M., Bita, C. E., Morris, W., Wiese, C., Morris, J. A., Paterson, C., Hedley, P. E., Hancock, R. D. & Taylor, M., Jun 2018, In : Planta. 247, 6, p. 1377-1392 16 p.

Research output: Contribution to journalArticle

Open Access
File
Solanum tuberosum
heat tolerance
Genotype
potatoes
Light
8 Citations (Scopus)
35 Downloads (Pure)

Combined drought and heat activates protective responses in eucalyptus globulus that are not activated when subjected to drought or heat stress alone

Correia, B., Hancock, R. D., Amaral, J., Gomez-Cadenas, A., Valledor, L. & Pinto, G., 20 Jun 2018, In : Frontiers in Plant Science. 9, p. 1-14 14 p., 819.

Research output: Contribution to journalArticle

Open Access
File
Eucalyptus globulus
heat stress
water stress
drought
heat
6 Citations (Scopus)
73 Downloads (Pure)

Contrasting genetic regulation of plant development in wild barley grown in two European environments revealed by nested association mapping

Herzig, P., Maurer, A., Draba, V., Sharma, R., Draicchio, F., Bull, H., Milne, L., Thomas, W. T. B., Flavell, A. J. & Pillen, K., 16 Mar 2018, In : Journal of Experimental Botany. 69, 7, p. 1517-1531 15 p.

Research output: Contribution to journalArticle

Open Access
File
Plant Development
Hordeum
chromosome mapping
plant development
barley
85 Downloads (Pure)

Correction to: A reversible light- and genotype-dependent acquired thermotolerance response protects the potato plant from damage due to excessive temperature

Trapero-Mozos, A., Ducreux, L. J. M., Bita, C. E., Morris, W., Wiese, C., Morris, J. A., Paterson, C., Hedley, P. E., Hancock, R. D. & Taylor, M., Jun 2018, In : Planta. 247, 6, p. 1393-1393 1 p.

Research output: Contribution to journalArticle

Open Access
File
asses
Solanum tuberosum
heat tolerance
Internet
Genotype

E3 ubiquitin ligases LNX1 and LNX2 localize at neuronal gap junctions formed by connexin36 in rodent brain and molecularly interact with connexin36

Lynn, B. D., Li, X., Hormuzdi, S. G., Griffiths, E. K., McGlade, C. J. & Nagy, J. I., Nov 2018, In : European Journal of Neuroscience. 48, 9, p. 3062-3081 20 p.

Research output: Contribution to journalArticle

Electrical Synapses
Ubiquitin-Protein Ligases
Rodentia
Ligands
Brain
4 Citations (Scopus)
71 Downloads (Pure)

Effects of sodium and amino acid substrate availability upon the expression and stability of the SNAT2 (SLC38A2) amino acid transporter

Hoffmann, T., Cwiklinski, E., Shah, D., Stretton, C., Hyde, R., Taylor, P. & Hundal, H., 7 Feb 2018, In : Frontiers in Pharmacology. 9, p. 1-9 9 p., 63.

Research output: Contribution to journalArticle

Open Access
File
Amino Acid Transport Systems
Sodium
Amino Acids
Protein Stability
Neutral Amino Acids
30 Downloads (Pure)

Erratum: Patchy promiscuity: machine learning applied to predict the host specificity of Salmonella enterica and Escherichia coli

Lupolova, N., Dallman, T. J., Holden, N. J. & Gally, D. L., 6 Jun 2018, In : Microbial Genomics. 4, 6

Research output: Contribution to journalArticle

Open Access
File
1 Citation (Scopus)

Gene expression analysis in Eucalyptus globulus exposed to drought stress in a controlled and a field environment indicates different strategies for short- and longer-term acclimation

Correia, B., Hancock, R. D., Valledor, L. & Pinto, G., 1 Nov 2018, In : Tree Physiology. 38, 11, p. 1623-1639 17 p.

Research output: Contribution to journalArticle

Eucalyptus
Acclimatization
Droughts
Clone Cells
Gene Expression
46 Downloads (Pure)

Genetic dissection of quantitative and qualitative traits using a minimum set of barley Recombinant Chromosome Substitution Lines

De la Fuente Cantó, C., Russell, J., Hackett, C. A., Booth, A., Dancey, S., George, T. S. & Waugh, R., 7 Dec 2018, In : BMC Plant Biology. 18, 1, p. 1-20 20 p., 340.

Research output: Contribution to journalArticle

Open Access
File
substitution lines
dissection
quantitative genetics
barley
chromosome

Genome sequence resource for the oomycete taro pathogen Phytophthora colocasiae

Vetukuri, R. R., Kushwaha, S., Sen, D., Whisson, S. C., Lamour, K. & Grenville-Briggs, L., Sep 2018, In : Molecular Plant - Microbe Interactions. 31, 9, p. 903-905 3 p.

Research output: Contribution to journalArticle

Open Access
Phytophthora colocasiae
Colocasia
Oomycetes
Phytophthora
taro
8 Citations (Scopus)
92 Downloads (Pure)

Genome-wide association analysis of grain yield-associated traits in a pan-European barley cultivar collection

Xu, X., Sharma, R., Tondelli, A., Russell, J., Comadran, J., Pillen, K., Schnaithmann, F., Kilian, B., Cattivelli, L., Thomas, W. T. B. & Flavell, A. J., 25 Jan 2018, In : Plant Genome. 11, 1, p. 1-11 11 p., 170073.

Research output: Contribution to journalArticle

Open Access
File
Genome-Wide Association Study
Hordeum
grain yield
barley
cultivars
7 Citations (Scopus)
65 Downloads (Pure)

Genome-wide association of yield traits in a nested association mapping population of barley reveals new gene diversity for future breeding

Sharma, R., Draicchio, F., Bull, H., Herzig, P., Maurer, A., Pillen, K., Thomas, W. T. B. & Flavell, A. J., 20 Jul 2018, In : Journal of Experimental Botany. 69, 16, p. 3811-3822 12 p.

Research output: Contribution to journalArticle

Open Access
File
Hordeum
chromosome mapping
Breeding
barley
Genome
3 Citations (Scopus)
61 Downloads (Pure)

How does temperature affect splicing events? Isoform switching of splicing factors regulates splicing of LATE ELONGATED HYPOCOTYL (LHY)

James, A. B., Calixto, C. P. G., Tzioutziou, N. A., Guo, W., Zhang, R., Simpson, C. G., Jiang, W., Nimmo, G. A., Brown, J. W. S. & Nimmo, H. G., 1 Jul 2018, In : Plant, Cell & Environment. 41, 7, p. 1539-1550 12 p.

Research output: Contribution to journalArticle

Open Access
File
Hypocotyl
hypocotyls
Protein Isoforms
Temperature
temperature
55 Downloads (Pure)

Identification of a new European rabbit IgA with a serine-rich hinge region

Pinheiro, A., de Sousa-Pereira, P., Strive, T., Knight, K. L., Woof, J. M., Esteves, P. J. & Abrantes, J., 8 Aug 2018, In : PLoS ONE. 13, 8, p. 1-11 11 p., e0201567.

Research output: Contribution to journalArticle

Open Access
File
Hinges
Immunoglobulin A
serine
Serine
rabbits
114 Downloads (Pure)

Large sub-clonal variation in Phytophthora infestans from recent severe late blight epidemics in India

Dey, T., Saville, A., Myers, K., Tewari, S., Cooke, D. E. L., Tripathy, S., Fry, W. E., Ristaino, J. B. & Guha Roy, S., 13 Mar 2018, In : Scientific Reports. 8, 12 p., 4429.

Research output: Contribution to journalArticle

Open Access
File
Phytophthora infestans
India
Genotype
Population
Bangladesh
2 Citations (Scopus)
113 Downloads (Pure)
Open Access
File
Embalming
Cadaver
Formaldehyde
Anatomy
Learning
2 Citations (Scopus)
93 Downloads (Pure)

Overexpression of the aphid-induced serine protease inhibitor CI2c gene in barley affects the generalist green peach aphid, not the specialist bird cherry-oat aphid

Losvik, A., Beste, L., Stephens, J. & Jonsson, L., 19 Mar 2018, In : PLoS ONE. 13, 3, p. 1-15 15 p., e0193816.

Research output: Contribution to journalArticle

Open Access
File
Rhopalosiphum padi
Aphids
Serine Proteinase Inhibitors
Myzus persicae
Birds
5 Citations (Scopus)
102 Downloads (Pure)

Photosynthetic Limitation as a Factor Influencing Yield in Highbush Blueberries (Vaccinium Corymbosum) Grown in a Northern European Environment

Petridis, A., van der Kaay, J., Chrysanthou, E., McCallum, S., Graham, J. & Hancock, R. D., 25 May 2018, In : Journal of Experimental Botany. 69, 12, p. 3069-3080 12 p.

Research output: Contribution to journalArticle

Open Access
File
Blueberry Plants
Vaccinium corymbosum
Fruit
Photosynthesis
photosynthesis
1 Citation (Scopus)
48 Downloads (Pure)

Phytophthora betacei, a new species within Phytophthora clade 1c causing late blight on Solanum betaceum in Colombia

Mideros, M. F., Turissini, D. A., Guayazán, N., Ibarra-Avila, H., Danies, G., Cárdenas, M., Myers, K., Tabima, J., Goss, E. M., Bernal, A., Lagos, L. E., Grajales, A., Gonzalez, L. N., Cooke, D. E. L., Fry, W. E., Grünwald, N., Matute, D. R. & Restrepo, S., Dec 2018, In : Persoonia. 41, p. 39-55 17 p.

Research output: Contribution to journalArticle

Open Access
File
Solanum betaceum
Phytophthora
Phytophthora infestans
Colombia
new species
44 Downloads (Pure)

Potato miR828 is associated with purple tuber skin and flesh color

Bonar, N., Liney, M., Zhang, R., Austin, C., Dessoly, J., Davidson, D., Stephens, J., McDougall, G., Taylor, M., Bryan, G. J. & Hornyik, C., 11 Dec 2018, In : Advances in Intelligent Systems and Computing. 871, p. 1-16 16 p., 1742.

Research output: Contribution to journalArticle

Open Access
File
Anthocyanins
RNA
Skin
Color
Genes
3 Citations (Scopus)

Quantification and colonisation dynamics of Escherichia coli O157:H7 inoculation of microgreens species and plant growth substrates

Wright, K. M. & Holden, N. J., 20 May 2018, In : International Journal of Food Microbiology. 273, p. 1-10 10 p.

Research output: Contribution to journalArticle

Escherichia coli O157
plant growth
Escherichia coli
Growth
Seedlings
16 Citations (Scopus)
52 Downloads (Pure)

Rapid and dynamic alternative splicing impacts the Arabidopsis cold response transcriptome

Calixto, C. P. G., Guo, W., James, A. B., Tzioutziou, N. A., Entizne, J. C., Panter, P. E., Knight, H., Nimmo, H., Zhang, R. & Brown, J. W. S., 1 Jul 2018, In : Plant Cell. 30, 7, p. 1424-1444 21 p.

Research output: Contribution to journalArticle

Open Access
File
alternative splicing
Alternative Splicing
Transcriptome
Arabidopsis
transcriptome
2 Citations (Scopus)
53 Downloads (Pure)
Open Access
File
Response Elements
Fibroblast Growth Factor 10
Vascular Endothelial Growth Factor A
Blood Vessels
Epithelial Cells
2 Citations (Scopus)

Resistance to Rhynchosporium commune in a collection of European spring barley germplasm

Looseley, M. E., Griffe, L. L., Büttner, B., Wright, K. M., Middlefell-Williams, J., Bull, H., Shaw, P. D., Macaulay, M., Booth, A., Schweizer, G., Russell, J. R., Waugh, R., Thomas, W. T. B. & Avrova, A., 1 Dec 2018, In : Theoretical and Applied Genetics. 131, 12, p. 2513-2528 16 p.

Research output: Contribution to journalArticle

Rhynchosporium
spring barley
Hordeum
Quantitative Trait Loci
quantitative trait loci
82 Downloads (Pure)

riboSeed: leveraging prokaryotic genomic architecture to assemble across ribosomal regions

Waters, N. R., Abram, F., Brennan, F., Holmes, A. & Pritchard, L., 20 Jun 2018, In : Nucleic Acids Research. 46, 11, p. e68 10 p.

Research output: Contribution to journalArticle

Open Access
File
Ribosomal DNA
Bacterial Genomes
Genome
Operon
Chromosomes
5 Citations (Scopus)
56 Downloads (Pure)

Single cell analysis of kynurenine and System L amino acid transport in T cells

Sinclair, L., Neyens, D., Ramsay, G., Taylor, P. & Cantrell, D., 17 May 2018, In : Nature Communications. 9, 1, 11 p., 1981 (2018).

Research output: Contribution to journalArticle

Open Access
File
Amino Acid Transport System L
Single-Cell Analysis
Kynurenine
T-cells
Systems Analysis