Molecular Cell and Developmental Biology

Search results

• Protein expression defining the developing spinal cord

  Storey, K. (Creator) & Dady, A. (Creator), Human Developmental Biology Resource Atlas, 2022

  https://hdbratlas.org/organ-systems/nervous-system/cns/spinal-cord/storeylab.html

  Dataset

• ERK signalling orchestrates neural differentiation by promoting the polycomb repressive complex

  Storey, K. (Creator), Gene Expression Omnibus (GEO), 16 Sept 2022

  https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE181015 and 3 more links, https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE121126, https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE181014, https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE196774 (show fewer)

  Dataset

• Nanopore direct RNA sequencing of Col-0 and fio1-3 mutant Arabidopsis

  Parker, M. (Creator), Soanes, B. K. (Creator), Kusakina, J. (Creator), Larrieu, A. (Creator), Knop, K. (Creator), Joy, N. (Creator), Breidenbach, F. (Creator), Sherwood, A. (Creator), Barton, G. (Creator), Fica, S. M. (Creator), Davies, B. H. (Creator) & Simpson, G. (Creator), European Nucleotide Archive, 5 Apr 2022

  https://www.ebi.ac.uk/ena/browser/view/PRJEB51364

  Dataset

• Functional 3D architecture in an intrinsically disordered E3 ligase domain facilitates ubiquitin transfer (dataset)

  Murphy, P. (Creator), Xu, Y. (Creator), Rouse, S. L. (Creator), Jaffray, E. G. (Creator), Plechanovová, A. (Creator), Matthews, S. J. (Creator), Penedo, C. (Creator) & Hay, R. T. (Creator), University of St Andrews, 2020

  DOI: 10.17630/5d766785-60c8-4dbe-99ec-926e2fa33798, https://research-portal.st-andrews.ac.uk/en/datasets/functional-3d-architecture-in-an-intrinsically-disordered-e3-liga

  Dataset

• Nanopore Direct RNA Sequencing Maps the Arabidopsis m6A Epitranscriptome

  Parker, M. (Creator), Knop, K. (Creator), Sherwood, A. (Creator), Schurch, N. (Creator), Mackinnon, K. (Creator), Gould, P. (Creator), Hall, A. (Creator), Barton, G. (Creator) & Simpson, G. (Creator), European Nucleotide Archive, 28 May 2019

  https://www.ebi.ac.uk/ena/data/view/PRJEB32782

  Dataset

• Proteomic analysis of FPA interactors

  Parker, M. (Creator), Knop, K. (Creator), Zacharaki, V. (Creator), Sherwood, A. (Creator), Tome, D. (Creator), Yu, X. (Creator), Martin, P. (Creator), Beynon, J. (Creator), Michaels, S. (Creator), Barton, G. (Creator) & Simpson, G. (Creator), PRoteomics IDEntifications Database, 16 Dec 2020

  https://www.ebi.ac.uk/pride/archive/projects/PXD022684

  Dataset

• Nanopore direct RNA sequencing of the Arabidopsis RNA exosome mutant hen2-2

  Parker, M. (Creator), Knop, K. (Creator), Barton, G. (Creator) & Simpson, G. (Creator), European Nucleotide Archive, 16 Dec 2020

  https://www.ebi.ac.uk/ena/browser/view/PRJEB41381

  Dataset

• High resolution imaging reveals heterogeneity in chromatin states between cells that is not inherited through cell division.

  Owen-Hughes, T. (Creator), Dickerson, D. (Creator), Gierlinski, M. (Contributor), Singh, V. (Contributor), Kitamura, E. (Contributor), Ball, G. (Contributor) & Tanaka, T. (Contributor), University of Dundee, 2016

  DOI: 10.17867/10000102, http://idr-demo.openmicroscopy.org/webclient/?show=project-151

  Dataset

• Single-cell RNA-sequencing of spinal cord ependymal cells from FOXJ1-EGFP mice

  Rodrigo Albors, A. (Creator) & Storey, K. (Creator), EMBL-EBI, 13 Dec 2022

  https://www.ebi.ac.uk/biostudies/arrayexpress/studies/E-MTAB-11563

  Dataset

• Why are the phenotypes of TRAF6 knock-in and TRAF6 knock-out mice so different?

  Petrova, T. (Creator), Bennett, K. (Creator), Nanda, S. (Creator), Strickson, S. (Creator), Scudamore, C. (Creator) & Prescott, A. R. (Creator), Dryad, 4 Feb 2022

  DOI: 10.5061/dryad.ns1rn8pv2, https://datadryad.org/stash/dataset/doi:10.5061/dryad.ns1rn8pv2

  Dataset

• Illumina RNA-Seq of FPA mutants and overexpressors.

  Parker, M. (Creator), Knop, K. (Creator), Zacharaki, V. (Creator), Sherwood, A. (Creator), Tome, D. (Creator), Yu, X. (Creator), Martin, P. (Creator), Beynon, J. (Creator), Michaels, S. (Creator), Barton, G. (Creator) & Simpson, G. (Creator), European Nucleotide Archive, 20 Nov 2020

  https://www.ebi.ac.uk/ena/browser/view/PRJEB41455

  Dataset

• Single-cell transcriptomics of mouse spinal cord ependymal cells

  Rodrigo Albors, A. (Creator) & Storey, K. (Creator), posit, 2022

  https://ependymalcell.shinyapps.io/ependymal_atlas/ and 2 more links, https://doi.org/10.1101/2022.03.07.483249, https://github.com/aidarodrigo/ependymal_cell (show fewer)

  Dataset

• Myosin II-mediated cell shape changes and cell intercalation contribute to primitive streak formation.

  Rozbicki, E. (Creator), Chuai, M. (Creator), Karjalainen, A. (Creator), Song, F. (Creator), Sang, H. M. (Creator), Martin, R. (Creator), Knolker, H.-J. (Creator), MacDonald, M. (Creator) & Weijer, C. (Creator), University of Dundee, 2015

  DOI: 10.15132/10000100, http://omero-cjw.lifesci.dundee.ac.uk/10.15132.10000100/ and one more link, https://creativecommons.org/licenses/by-nc-nd/3.0/ (show fewer)

  Dataset

  File

• Smc3 deacetylation by Hos1 facilitates efficient dissolution of sister chromatid cohesion during early anaphase

  Yue, Z. (Contributor), Tanaka, T. (Creator) & Li, S. (Contributor), Mendeley Data, 4 Nov 2017

  DOI: 10.17632/m64mz2tbvh.2, https://data.mendeley.com/datasets/m64mz2tbvh

  Dataset

• RNA expression in the spinal cord at CS13 and CS18

  Storey, K. (Creator) & Rodrigo Albors, A. (Creator), Human Developmental Biology Resource Atlas, 2022

  https://hdbratlas.org/organ-systems/nervous-system/cns/spinal-cord/CS13-18-rnascope.html

  Dataset

• Reconstruction of distinct vertebrate gastrulation modes via modulation of key cell behaviors in the chick embryo

  Chuai, M. (Creator), Serrano Najera, G. (Creator), Serra, M. (Creator), Mahadevan, L. (Creator) & Weijer, K. (Creator), University of Dundee, 18 Nov 2022

  DOI: 10.15132/10000190, https://www.ebi.ac.uk/biostudies/BioImages/studies/S-BIAD553 and one more link, https://doi.org/10.1126/sciadv.abn5429 (show fewer)

  Dataset

  File

• Nanopore direct RNA sequencing of FPA mutants and overexpressors

  Parker, M. (Creator), Knop, K. (Creator), Zacharaki, V. (Creator), Sherwood, A. (Creator), Tome, D. (Creator), Yu, X. (Creator), Martin, P. (Creator), Beynon, J. (Creator), Michaels, S. (Creator), Barton, G. (Creator) & Simpson, G. (Creator), European Nucleotide Archive, 20 Nov 2020

  https://www.ebi.ac.uk/ena/browser/view/PRJEB41451

  Dataset

• Mutant screen of early flowering Arabidopsis EMS mutants with increased MAF2 intron retention

  Parker, M. (Creator), Soanes, B. K. (Creator), Kusakina, J. (Creator), Larrieu, A. (Creator), Knop, K. (Creator), Joy, N. (Creator), Breidenbach, F. (Creator), Sherwood, A. (Creator), Barton, G. (Creator), Fica, S. M. (Creator), Davies, B. H. (Creator) & Simpson, G. (Creator), European Nucleotide Archive, 5 Apr 2022

  https://www.ebi.ac.uk/ena/browser/view/PRJEB51468

  Dataset

• Illumina RNA sequencing of Col-0 and fio1-3 mutant Arabidopsis

  Parker, M. (Creator), Soanes, B. K. (Creator), Kusakina, J. (Creator), Larrieu, A. (Creator), Knop, K. (Creator), Joy, N. (Creator), Breidenbach, F. (Creator), Sherwood, A. (Creator), Barton, G. (Creator), Fica, S. M. (Creator), Davies, B. H. (Creator) & Simpson, G. (Creator), European Nucleotide Archive, 5 Apr 2022

  https://www.ebi.ac.uk/ena/browser/view/PRJEB51363

  Dataset

• Helicos direct RNA sequencing of FPA mutants and overexpressors

  Parker, M. (Creator), Knop, K. (Creator), Zacharaki, V. (Creator), Barton, G. (Creator) & Simpson, G. (Creator), Zenodo, 20 Dec 2020

  DOI: 10.5281/zenodo.4309752

  Dataset

• Single-cell RNA-sequencing of cells from spinal cord central canal region of young adult and aged mice

  Rodrigo Albors, A. (Creator) & Storey, K. (Creator), EMBL-EBI, 13 Dec 2022

  https://www.ebi.ac.uk/biostudies/arrayexpress/studies/E-MTAB-11561

  Dataset