Molecular Cell and Developmental Biology

2024

Toward a common standard for data and specimen provenance in life sciences

Wittner, R. (Lead / Corresponding author), Holub, P., Mascia, C., Frexia, F., Müller, H., Plass, M., Allocca, C., Betsou, F., Burdett, T., Cancio, I., Chapman, A., Chapman, M., Courtot, M., Curcin, V., Eder, J., Elliot, M., Exter, K., Goble, C., Golebiewski, M. & Kisler, B. & 16 others, Kremer, A., Leo, S., Lin-Gibson, S., Marsano, A., Mattavelli, M., Moore, J., Nakae, H., Perseil, I., Salman, A., Sluka, J., Soiland-Reyes, S., Strambio-De-Castillia, C., Sussman, M., Swedlow, J. R., Zatloukal, K. & Geiger, J., 19 Jan 2024, In: Learning Health Systems. 8, 1, 9 p., e10365.

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2 Citations (Scopus)

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2023

The Mission to Ensure Continued Funding for Excellent Basic Research

Lamond, A. I. (Lead / Corresponding author), Dikic, I., Nussenzweig, A., Muller, C. W., Thornton, J. M. & Yaffe, M. B., 5 Jul 2023, In: EMBO Reports. 24, 7, 2 p., e57498.

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1 Citation (Scopus)

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2022

Author Correction: Dynamic SUMO modification regulates mitotic chromosome assembly and cell cycle progression in Caenorhabditis elegans

Pelisch, F., Sonneville, R., Pourkarimi, E., Agostinho, A., Blow, J. J., Gartner, A. & Hay, R. T. (Lead / Corresponding author), 24 Nov 2022, In: Nature Communications. 13, 1, 2 p., 7220.

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Expression of Concern: Protein phosphatase 4 interacts with the Survival of Motor Neurons complex and enhances the temporal localisation of snRNPs (J. Cell Sci. (2003) 116 (1905-1913) DOI: 10.1242/jcs.00409)

Carnegie, G. K., Sleeman, J. E., Morrice, N., Hastie, C. J., Peggie, M. W., Philp, A., Lamond, A. I. & Cohen, P. T. W., Oct 2022, In: Journal of Cell Science. 135, 19, 1 p., jcs260640.

Research output: Contribution to journal › Comment/debate › peer-review

Open Access

IMI European Lead Factory - democratizing access to high-throughput screening

Jones, P. S., Boucharens, S., McElroy, S. P., Morrison, A., Honarnejad, S., van Boeckel, S., van den Hurk, H., Basting, D., Hüser, J., Jaroch, S., Ottow, E., Benningshof, J., Folmer, R. H. A., Leemhuis, F., Kramer-Verhulst, P. M., Nies, V. J. M., Orrling, K. M., Rijnders, T., Pfander, C. & Engkvist, O. & 49 others, Pairaudeau, G., Simpson, P. B., Ortholand, J.-Y., Roche, D., Dömling, A., Kühnert, S. M., Roevens, P. W. M., van Vlijmen, H., van Wanrooij, E. J. A., Verbruggen, C., Nussbaumer, P., Ovaa, H., van der Stelt, M., Simonsen, K. B., Tagmose, L., Waldmann, H., Duffy, J., Finsinger, D., Jurzak, M., Burgess-Brown, N. A., Lee, W. H., Rutjes, F. P. J. T., Haag, H., Kallus, C., Mors, H., Dorval, T., Lesur, B., Ramon Olayo, F., Hamza, D., Jones, G., Pearce, C., Piechot, A., Tzalis, D., Clausen, M. H., Davis, J., Derouane, D., Vermeiren, C., Kaiser, M., Stockman, R. A., Barrault, D. V., Pannifer, A. D., Swedlow, J. R., Nelson, A. S., Orru, R. V. A., Ruijter, E., van Helden, S. P., Li, V. M., Vries, T. & de Vlieger, J. S. B., Apr 2022, In: Nature reviews. Drug discovery. 21, p. 245-246 2 p.

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2 Citations (Scopus)

MITI minimum information guidelines for highly multiplexed tissue images

Schapiro, D., Yapp, C., Sokolov, A., Reynolds, S. M., Chen, Y.-A., Sudar, D., Xie, Y., Muhlich, J., Arias-Camison, R., Arena, S., Taylor, A. J., Nikolov, M., Tyler, M., Lin, J.-R., Burlingame, E. A., Chang, Y. H., Farhi, S. L., Thorsson, V. & Venkatamohan, N. & 19 others, Drewes, J. L., Pe'er, D., Gutman, D. A., Herrmann, M. D., Gehlenborg, N., Bankhead, P., Roland, J. T., Herndon, J. M., Snyder, M. P., Angelo, M., Nolan, G., Swedlow, J. R., Schultz, N., Merrick, D. T., Mazzili, S. A., Cerami, E., Rodig, S. J., Santagata, S. (Lead / Corresponding author) & Sorger, P. K. (Lead / Corresponding author), 21 Mar 2022, In: Nature Methods. 19, 3, p. 262-267 6 p.

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28 Citations (Scopus)

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Publisher's Note: ZNRF2 is released from membranes by growth factors and, together with ZNRF1, regulates the Na+/K+ATPase

Hoxhaj, G., Najafov, A., Toth, R., Campbell, D. G., Prescott, A. R. & Mackintosh, C., 10 Mar 2022, In: Journal of Cell Science. 135, 6, jcs259936.

Research output: Contribution to journal › Comment/debate › peer-review

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2021

Nanometre-scale imaging and AI reveal the interior of whole cells

Swedlow, J. R. & Collinson, L., 1 Nov 2021, In: Nature. 599, 7883, p. 39-40 2 p.

Research output: Contribution to journal › Comment/debate › peer-review

1 Citation (Scopus)

REMBI: Recommended Metadata for Biological Images-enabling reuse of microscopy data in biology

Sarkans, U. (Lead / Corresponding author), Chiu, W., Collinson, L., Darrow, M. C., Ellenberg, J., Grunwald, D., Hériché, J.-K., Iudin, A., Martins, G. G., Meehan, T., Narayan, K., Patwardhan, A., Russell, M. R. G., Saibil, H. R., Strambio-De-Castillia, C., Swedlow, J. R., Tischer, C., Uhlmann, V., Verkade, P. & Barlow, M. & 26 others, Bayraktar, O., Birney, E., Catavitello, C., Cawthorne, C., Wagner-Conrad, S., Duke, E., Paul-Gilloteaux, P., Gustin, E., Harkiolaki, M., Kankaanpää, P., Lemberger, T., McEntyre, J., Moore, J., Nicholls, A. W., Onami, S., Parkinson, H., Parsons, M., Romanchikova, M., Sofroniew, N., Swoger, J., Utz, N., Voortman, L. M., Wong, F., Zhang, P., Kleywegt, G. J. (Lead / Corresponding author) & Brazma, A. (Lead / Corresponding author), Dec 2021, In: Nature Methods. 18, p. 1418-1422 5 p.

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59 Citations (Scopus)

2020

First person - Leeanne McGurk

McGurk, L. (Lead / Corresponding author), Jun 2020, In: Journal of Cell Science. 133, 12, 2 p., jcs.248773.

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High-content imaging zur Identifikation von Replikationsfehlern

Translated title of the contribution: High-content imaging for the identification of replication errorsSzczesna, K. (Lead / Corresponding author) & Denninger, V. (Lead / Corresponding author), Feb 2020, In: BioSpektrum. 26, 1, p. 66-68 3 p.

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Publisher Correction: Single-cell RNA-sequencing of differentiating iPS cells reveals dynamic genetic effects on gene expression

Cuomo, A. S. E., Seaton, D. D., McCarthy, D. J., Martinez, I., Vallier, L. (Lead / Corresponding author), Marioni, J. C. (Lead / Corresponding author), Chhatriwala, M. (Lead / Corresponding author) & Stegle, O. (Lead / Corresponding author), 23 Mar 2020, In: Nature Communications. 11, 1 p., 1572.

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5 Citations (Scopus)

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2018

Capturing dynamic protein interactions: A method based on heat denaturation reveals how proteins interact in different cells

Li, X. H. (Lead / Corresponding author), Chavali, P. L. & Babu, M. M. (Lead / Corresponding author), 9 Mar 2018, In: Science. 359, 6380, p. 1105-1106 2 p.

Research output: Contribution to journal › Comment/debate › peer-review

16 Citations (Scopus)

2017

Corrigendum: Common genetic variation drives molecular heterogeneity in human iPSCs (Nature (2017) 546 (370-375) DOI: 10.1038/nature22403)

Kilpinen, H., Goncalves, A., Leha, A., Afzal, V., Alasoo, K., Ashford, S., Bala, S., Bensaddek, D., Casale, F. P., Culley, O. J., Danecek, P., Faulconbridge, A., Harrison, P. W., Kathuria, A., McCarthy, D. J., McCarthy, S. A., Meleckyte, R., Memari, Y., Moens, N. & Soares, F. & 23 others, Mann, A., Streeter, I., Agu, C. A., Alderton, A., Nelson, R., Harper, S., Patel, M., White, A., Patel, S. R., Clarke, L., Halai, R., Kirton, C. M., Kolb-Kokocinski, A., Beales, P. L., Birney, E., Danovi, D., Lamond, A., Ouwehand, W. H., Vallier, L., Watt, F. M. (Lead / Corresponding author), Durbin, R. (Lead / Corresponding author), Stegle, O. (Lead / Corresponding author) & Gaffney, D. J. (Lead / Corresponding author), 29 Jun 2017, In: Nature. 546, 7660, p. 686 1 p.

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12 Citations (Scopus)

Deciphering Subunit-Specific Functions within SWI/SNF Complexes

Hughes, A. & Owen-Hughes, T., 28 Feb 2017, In: Cell Reports. 18, 9, p. 2075-2076 2 p.

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6 Citations (Scopus)

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2015

An open data ecosystem for cell migration research

Masuzzo, P., Martens, L. (Lead / Corresponding author), The 2014 Cell Migration Workshop Participants, Ampe, C., Anderson, K. I., Barry, J., De Wever, O., Debeir, O., Decaes-Tecker, C., Dolznig, H., Friedl, P., Gaggioli, C., Geiger, B., Goldberg, I. G., Horn, E., Horwitz, R., Kam, Z., Le Dévédec, S. E., Vignjevic, D. M. & Moore, J. & 9 others, Olivo-Marin, J. C., Sahai, E., Sansone, S. A., Sanz-Moreno, V., Strömblad, S., Swedlow, J., Textor, J., Van Troys, M. & Zantl, R., Feb 2015, In: Trends in Cell Biology. 25, 2, p. 55-58 4 p.

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17 Citations (Scopus)

Embracing the chaos of behavioral proteomics: a comment on Valcu and Kempenaers

Bailey, N. W. (Lead / Corresponding author) & Ly, T., 2015, In: Behavioral Ecology. 26, 1, p. 18-19 2 p.

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1 Citation (Scopus)

Identification of small molecule inhibitors of pre-mRNA splicing

Pawallek, A., McElroy, S., Samatov, T., Mitchell, L., Woodland, A., Ryder, U., Gray, D., Lührmann, R. & Lamond, A. I., 6 Mar 2015, In: Journal of Biological Chemistry. 290, 10, 1 p.

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4 Citations (Scopus)

Inferring cell type innovations by phylogenetic methods-concepts, methods, and limitations

Kin, K., 15 Dec 2015, In: Journal of Experimental Zoology Part B: Molecular and Developmental Evolution. 324, 8, p. 653-661 9 p.

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11 Citations (Scopus)

2014

A 3D cellular context for the macromolecular world

Patwardhan, A., Ashton, A., Brandt, R., Butcher, S., Carzaniga, R., Chiu, W., Collinson, L., Doux, P., Duke, E., Ellisman, M. H., Franken, E., Grünewald, K., Heriche, J.-K., Koster, A., Kühlbrandt, W., Lagerstedt, I., Larabell, C., Lawson, C. L., Saibil, H. R. & Sanz-García, E. & 4 others, Subramaniam, S., Verkade, P., Swedlow, J. R. (Lead / Corresponding author) & Kleywegt, G. J. (Lead / Corresponding author), 7 Oct 2014, In: Nature Structural & Molecular Biology. 21, 10, p. 841-845 5 p.

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40 Citations (Scopus)

La chromatine naissante révélée

Translated title of the contribution: Nascent chromatin composition revealedAlabert, C. (Lead / Corresponding author), 10 Nov 2014, In: Medecine/Sciences. 30, p. 937-940 4 p.

Research output: Contribution to journal › Comment/debate › peer-review