Plant Sciences

Search results

• Study of genome-wide alternative polyadenylation in A. thaliana

  Sherstnev, A. (Creator), Duc, C. (Creator), Cole, C. (Creator), Zacharaki, V. (Creator), Hornyik, C. (Creator), Ozsolak, F. (Creator), Milos, P. M. (Creator), Barton, G. (Creator) & Simpson, G. (Creator), European Nucleotide Archive, 18 Jan 2012

  http://www.ebi.ac.uk/ena/data/view/ERP001018

  Dataset

• Source images-Uptake of oomycete RXLR effectors into host cells by clathrin-mediated endocytosis

  Wang, H. (Creator), Birch, P. (Creator), Wang, S. (Creator) & Boevink, P. (Creator), University of Dundee, 3 Mar 2023

  DOI: 10.15132/10000193

  Dataset

  File

• Proteomics data-Uptake of oomycete RXLR effectors into host cells by clathrin-mediated endocytosis

  Wang, H. (Creator) & Birch, P. (Creator), University of Dundee, 3 Mar 2023

  DOI: 10.15132/10000194

  Dataset

  File

• Dataset for "Computational prediction of structure, function and interaction of Myzus persicae (green peach aphid) salivary effector proteins "

  Waksman, T. (Creator), Astin, E. (Creator), Fisher, R. (Creator), Hunter, W. (Creator) & Bos, J. (Creator), Zenodo, 13 Dec 2023

  DOI: 10.5281/zenodo.10370050, https://zenodo.org10370050

  Dataset

• Mutant screen of early flowering Arabidopsis EMS mutants with increased MAF2 intron retention

  Parker, M. (Creator), Soanes, B. K. (Creator), Kusakina, J. (Creator), Larrieu, A. (Creator), Knop, K. (Creator), Joy, N. (Creator), Breidenbach, F. (Creator), Sherwood, A. (Creator), Barton, G. (Creator), Fica, S. M. (Creator), Davies, B. H. (Creator) & Simpson, G. (Creator), European Nucleotide Archive, 5 Apr 2022

  https://www.ebi.ac.uk/ena/browser/view/PRJEB51468

  Dataset

• Nanopore direct RNA sequencing of FPA mutants and overexpressors

  Parker, M. (Creator), Knop, K. (Creator), Zacharaki, V. (Creator), Sherwood, A. (Creator), Tome, D. (Creator), Yu, X. (Creator), Martin, P. (Creator), Beynon, J. (Creator), Michaels, S. (Creator), Barton, G. (Creator) & Simpson, G. (Creator), European Nucleotide Archive, 20 Nov 2020

  https://www.ebi.ac.uk/ena/browser/view/PRJEB41451

  Dataset

• Proteomic analysis of FPA interactors

  Parker, M. (Creator), Knop, K. (Creator), Zacharaki, V. (Creator), Sherwood, A. (Creator), Tome, D. (Creator), Yu, X. (Creator), Martin, P. (Creator), Beynon, J. (Creator), Michaels, S. (Creator), Barton, G. (Creator) & Simpson, G. (Creator), PRoteomics IDEntifications Database, 16 Dec 2020

  https://www.ebi.ac.uk/pride/archive/projects/PXD022684

  Dataset

• Data from: Susceptibility of Macrosiphum euphorbiae to the parasitoid Aphidius ervi: larval development depends on host aphid genotype

  Clarke, H. V. (Creator), Cullen, D. (Creator), Hubbard, S. F. (Creator) & Karley, A. J. (Creator), Dryad, 1 Nov 2017

  DOI: 10.5061/dryad.0t667, https://datadryad.org/stash/dataset/doi:10.5061/dryad.0t667

  Dataset

• Data from: Plant and insect microbial symbionts alter the outcome of plant-herbivore-parasitoid interactions: implications for invaded, agricultural and natural systems

  Bennett, A. E. (Creator), Gedrovics, E. (Creator), Karley, A. J. (Creator) & Millar, N. S. (Creator), Dryad, 13 Jun 2017

  DOI: 10.5061/dryad.5vv5v, https://datadryad.org/stash/dataset/doi:10.5061/dryad.5vv5v

  Dataset

• Data from: Characterization of Arabidopsis transcriptional responses to different aphid species reveals genes that contribute to host susceptibility and non-host resistance

  Jaouannet, M. (Creator), Morris, J. A. (Creator), Hedley, P. E. (Creator) & Bos, J. I. B. (Creator), Dryad, 7 May 2016

  DOI: 10.5061/dryad.18b29, https://datadryad.org/stash/dataset/doi:10.5061/dryad.18b29

  Dataset

• Nanopore Direct RNA Sequencing Maps the Arabidopsis m6A Epitranscriptome

  Parker, M. (Creator), Knop, K. (Creator), Sherwood, A. (Creator), Schurch, N. (Creator), Mackinnon, K. (Creator), Gould, P. (Creator), Hall, A. (Creator), Barton, G. (Creator) & Simpson, G. (Creator), European Nucleotide Archive, 28 May 2019

  https://www.ebi.ac.uk/ena/data/view/PRJEB32782

  Dataset

• Nanopore direct RNA sequencing of the Arabidopsis RNA exosome mutant hen2-2

  Parker, M. (Creator), Knop, K. (Creator), Barton, G. (Creator) & Simpson, G. (Creator), European Nucleotide Archive, 16 Dec 2020

  https://www.ebi.ac.uk/ena/browser/view/PRJEB41381

  Dataset

• Illumina RNA sequencing of Col-0 and fio1-3 mutant Arabidopsis

  Parker, M. (Creator), Soanes, B. K. (Creator), Kusakina, J. (Creator), Larrieu, A. (Creator), Knop, K. (Creator), Joy, N. (Creator), Breidenbach, F. (Creator), Sherwood, A. (Creator), Barton, G. (Creator), Fica, S. M. (Creator), Davies, B. H. (Creator) & Simpson, G. (Creator), European Nucleotide Archive, 5 Apr 2022

  https://www.ebi.ac.uk/ena/browser/view/PRJEB51363

  Dataset

• Helicos direct RNA sequencing of FPA mutants and overexpressors

  Parker, M. (Creator), Knop, K. (Creator), Zacharaki, V. (Creator), Barton, G. (Creator) & Simpson, G. (Creator), Zenodo, 20 Dec 2020

  DOI: 10.5281/zenodo.4309752

  Dataset

• Illumina RNA-Seq of FPA mutants and overexpressors.

  Parker, M. (Creator), Knop, K. (Creator), Zacharaki, V. (Creator), Sherwood, A. (Creator), Tome, D. (Creator), Yu, X. (Creator), Martin, P. (Creator), Beynon, J. (Creator), Michaels, S. (Creator), Barton, G. (Creator) & Simpson, G. (Creator), European Nucleotide Archive, 20 Nov 2020

  https://www.ebi.ac.uk/ena/browser/view/PRJEB41455

  Dataset

• Data from: Effector gene birth in plant parasitic nematodes: neofunctionalization of a housekeeping glutathione synthetase gene

  Lilley, C. J. (Creator), Maqbool, A. (Creator), Wu, D. (Creator), Yusup, H. B. (Creator), Jones, L. M. (Creator), Birch, P. R. J. (Creator), Banfield, M. J. (Creator), Urwin, P. E. (Creator) & Eves-Van Den Akker, S. (Creator), Dryad, 19 Mar 2019

  DOI: 10.5061/dryad.7vd0160, https://datadryad.org/stash/dataset/doi:10.5061/dryad.7vd0160

  Dataset

• NT-Dataset S1

  Bulgarelli, D. (Creator), Zenodo, 28 Sept 2022

  DOI: 10.5281/zenodo.7119900

  Dataset

• Data from: A systems biology view of responses to lignin biosynthesis perturbations in Arabidopsis

  Vanholme, R. (Creator), Storme, V. (Creator), Vanholme, B. (Creator), Sundin, L. (Creator), Holst Christensen, J. (Creator), Goeminne, G. (Creator), Halpin, C. (Creator), Rohde, A. (Creator), Morreel, K. (Creator) & Boerjan, W. (Creator), Dryad, 21 Feb 2013

  DOI: 10.5061/dryad.jn16g, https://datadryad.org/stash/dataset/doi:10.5061/dryad.jn16g

  Dataset

• Data from: Functional C-terminally encoded peptide (CEP) plant hormone domains evolved de novo in the plant parasite Rotylenchulus reniformis

  Eves-Van Den Akker, S. (Creator), Lilley, C. J. (Creator), Yusup, H. B. (Creator), Jones, J. T. (Creator) & Urwin, P. E. (Creator), Dryad, 13 Apr 2016

  DOI: 10.5061/dryad.q8h75, https://datadryad.org/stash/dataset/doi:10.5061/dryad.q8h75

  Dataset

• Data from: Rapid and dynamic alternative splicing impacts the Arabidopsis cold response transcriptome

  Calixto, C. P. G. (Creator), Guo, W. (Creator), James, A. B. (Creator), Tzioutziou, N. A. (Creator), Entizne, J. C. (Creator), Panter, P. E. (Creator), Knight, H. (Creator), Nimmo, H. (Creator), Zhang, R. (Creator) & Brown, J. W. S. (Creator), Dryad, 7 May 2019

  DOI: 10.5061/dryad.fk1cj47, https://datadryad.org/stash/dataset/doi:10.5061/dryad.fk1cj47

  Dataset

• Nanopore direct RNA sequencing of Col-0 and fio1-3 mutant Arabidopsis

  Parker, M. (Creator), Soanes, B. K. (Creator), Kusakina, J. (Creator), Larrieu, A. (Creator), Knop, K. (Creator), Joy, N. (Creator), Breidenbach, F. (Creator), Sherwood, A. (Creator), Barton, G. (Creator), Fica, S. M. (Creator), Davies, B. H. (Creator) & Simpson, G. (Creator), European Nucleotide Archive, 5 Apr 2022

  https://www.ebi.ac.uk/ena/browser/view/PRJEB51364

  Dataset