School of Life Sciences

Search results

• Dataset for "Computational prediction of structure, function and interaction of Myzus persicae (green peach aphid) salivary effector proteins "

  Waksman, T. (Creator), Astin, E. (Creator), Fisher, R. (Creator), Hunter, W. (Creator) & Bos, J. (Creator), Zenodo, 13 Dec 2023

  DOI: 10.5281/zenodo.10370050, https://zenodo.org10370050

  Dataset

• Data from: Functional C-terminally encoded peptide (CEP) plant hormone domains evolved de novo in the plant parasite Rotylenchulus reniformis

  Eves-Van Den Akker, S. (Creator), Lilley, C. J. (Creator), Yusup, H. B. (Creator), Jones, J. T. (Creator) & Urwin, P. E. (Creator), Dryad, 13 Apr 2016

  DOI: 10.5061/dryad.q8h75, https://datadryad.org/stash/dataset/doi:10.5061/dryad.q8h75

  Dataset

• Data from: Early photosynthetic eukaryotes inhabited low-salinity habitats

  Sánchez-Baracaldo, P. (Creator), Raven, J. A. (Creator), Pisani, D. (Creator) & Knoll, A. H. (Creator), Dryad, 21 Jul 2018

  DOI: 10.5061/dryad.421p2, https://datadryad.org/stash/dataset/doi:10.5061/dryad.421p2

  Dataset

• Illumina RNA-Seq of FPA mutants and overexpressors.

  Parker, M. (Creator), Knop, K. (Creator), Zacharaki, V. (Creator), Sherwood, A. (Creator), Tome, D. (Creator), Yu, X. (Creator), Martin, P. (Creator), Beynon, J. (Creator), Michaels, S. (Creator), Barton, G. (Creator) & Simpson, G. (Creator), European Nucleotide Archive, 20 Nov 2020

  https://www.ebi.ac.uk/ena/browser/view/PRJEB41455

  Dataset

• K48-K63-Ubiquitin chain pulldown from U2OS cell lysates

  Kulathu, Y. (Supervisor), University of Dundee, 7 May 2024

  https://www.ebi.ac.uk/pride/archive/projects/PXD046025

  Dataset

• Modelling data for: Short-course combination treatment for experimental chronic Chagas disease

  González Del Valle, S. (Creator), Zuccotto, F. (Creator), Luise, C. (Creator), Wyllie, S. (Creator) & De Rycker, M. (Creator), Dryad, 14 Dec 2023

  DOI: 10.5061/dryad.95x69p8r7, https://datadryad.org/stash/dataset/doi:10.5061/dryad.95x69p8r7

  Dataset

• Data from: Susceptibility of Macrosiphum euphorbiae to the parasitoid Aphidius ervi: larval development depends on host aphid genotype

  Clarke, H. V. (Creator), Cullen, D. (Creator), Hubbard, S. F. (Creator) & Karley, A. J. (Creator), Dryad, 1 Nov 2017

  DOI: 10.5061/dryad.0t667, https://datadryad.org/stash/dataset/doi:10.5061/dryad.0t667

  Dataset

• Design and high-throughput implementation of MALDI-TOF/MS-based assays for Parkin E3 ligase activity

  De Cesare, V. (Creator), Zenodo, 18 Dec 2023

  DOI: 10.5281/zenodo.10402851, https://zenodo.org/records/10402851

  Dataset

• KRAS-G12C in Complex with Compound 1

  Popow, J. (Creator), Farnaby, W. (Creator), Gollner, A. (Creator), Kofink, C. (Creator), Fischer, G. (Creator), Wurm, M. (Creator), Zollman, D. (Creator), Wijaya, A. (Creator), Mischerikow, N. (Creator), Hasenoehrl, C. (Creator), Prokofeva, P. (Creator), Arnhof, H. (Creator), Arce-Solano, S. (Creator), Bell, S. (Creator), Boeck, G. (Creator), Diers, E. (Creator), Frost, A. (Creator), Goodwin-Tindall, J. (Creator), Karolyi-Oezguer, J. (Creator), Khan, S. (Creator), Klawatsch, T. (Creator), Koegl, M. (Creator), Kousek, R. (Creator), Kratochvil, B. (Creator), Kropatsch, K. (Creator), Lauber, A. A. (Creator), McLennan, R. (Creator), Olt, S. (Creator), Peter, D. (Creator), Petermann, O. (Creator), Roessler, V. (Creator), Stolt-Bergner, P. (Creator), Strack, P. (Creator), Strauss, E. (Creator), Trainor, N. (Creator), Vetma, V. (Creator), Whitworth, C. (Creator), Zhong, S. (Creator), Quant, J. (Creator), Weinstabl, H. (Creator), Kuster, B. (Creator), Ettmayer, P. (Creator) & Ciulli, A. (Creator), Research Collaboratory for Structural Bioinformatics Protein Data Bank, 6 Dec 2023

  DOI: 10.2210/pdb8QUG/pdb

  Dataset

• PROTAC-mediated complex of KRAS with VHL/Elongin-B/Elongin-C/Cullin-2/Rbx1

  Fischer, G. (Creator), Peter, D. (Creator), Arce-Solano, S. (Creator) & Ciulli, A. (Creator), Research Collaboratory for Structural Bioinformatics Protein Data Bank, 6 Dec 2023

  DOI: 10.2210/pdb8qu8/pdb

  Dataset

• Data from: Effector gene birth in plant parasitic nematodes: neofunctionalization of a housekeeping glutathione synthetase gene

  Lilley, C. J. (Creator), Maqbool, A. (Creator), Wu, D. (Creator), Yusup, H. B. (Creator), Jones, L. M. (Creator), Birch, P. R. J. (Creator), Banfield, M. J. (Creator), Urwin, P. E. (Creator) & Eves-Van Den Akker, S. (Creator), Dryad, 19 Mar 2019

  DOI: 10.5061/dryad.7vd0160, https://datadryad.org/stash/dataset/doi:10.5061/dryad.7vd0160

  Dataset

• Smc3 deacetylation by Hos1 facilitates efficient dissolution of sister chromatid cohesion during early anaphase

  Yue, Z. (Contributor), Tanaka, T. (Creator) & Li, S. (Contributor), Mendeley Data, 4 Nov 2017

  DOI: 10.17632/m64mz2tbvh.2, https://data.mendeley.com/datasets/m64mz2tbvh

  Dataset

• Nanopore Direct RNA Sequencing Maps the Arabidopsis m6A Epitranscriptome

  Parker, M. (Creator), Knop, K. (Creator), Sherwood, A. (Creator), Schurch, N. (Creator), Mackinnon, K. (Creator), Gould, P. (Creator), Hall, A. (Creator), Barton, G. (Creator) & Simpson, G. (Creator), European Nucleotide Archive, 28 May 2019

  https://www.ebi.ac.uk/ena/data/view/PRJEB32782

  Dataset

• Haem-iron plays a key role in the regulation of the Ess/type VII secretion system of Staphylococcus aureus RN6390

  Casabona, M. G. (Creator), Kneuper, H. (Creator), Alferes de Lima, D. (Creator), Harkins, C. (Creator), Zoltner, M. (Creator), Hjerde, E. (Creator), Holden, M. T. G. (Creator) & Palmer, T. (Creator), European Nucleotide Archive, 26 May 2015

  https://www.ebi.ac.uk/ena/data/view/PRJEB8221

  Dataset

• Targeting cancer with small molecule panKRAS degraders

  Vetma, V. (Creator) & Ciulli, A. (Creator), ProteomeXchange, 22 Oct 2024

  https://www.ebi.ac.uk/pride/archive/projects/PXD045416 and one more link, https://proteomecentral.proteomexchange.org/cgi/GetDataset?ID=PXD045416 (show fewer)

  Dataset

• Mechanism of 60S ribosomal subunit recognition and UFMylation by the UFM1 E3 ligase complex

  Kulathu, Y. (Supervisor), ProteomeXchange, 22 Mar 2024

  https://www.ebi.ac.uk/pride/archive/projects/PXD046990

  Dataset

• LC-MS/MS analysis of ribosome UFMylation in vitro

  Kulathu, Y. (Supervisor), University of Dundee, 22 Mar 2024

  https://www.ebi.ac.uk/pride/archive/projects/PXD046991

  Dataset

• Nanopore direct RNA sequencing of Col-0 and fio1-3 mutant Arabidopsis

  Parker, M. (Creator), Soanes, B. K. (Creator), Kusakina, J. (Creator), Larrieu, A. (Creator), Knop, K. (Creator), Joy, N. (Creator), Breidenbach, F. (Creator), Sherwood, A. (Creator), Barton, G. (Creator), Fica, S. M. (Creator), Davies, B. H. (Creator) & Simpson, G. (Creator), European Nucleotide Archive, 5 Apr 2022

  https://www.ebi.ac.uk/ena/browser/view/PRJEB51364

  Dataset

• LsRTDv1: A reference transcript dataset for accurate transcript-specific expression analysis in lettuce

  Denby, K. (Creator), Kara, M. F. (Creator), Guo, W. (Creator) & Zhang, R. (Creator), Dryad, 8 Feb 2024

  DOI: 10.5061/dryad.xwdbrv1m8, http://.https://doi.org/10.5061/dryad.xwdbrv1m8

  Dataset

• ProteomeXchange dataset PXD023140

  Swamy, M. (Creator), University of Dundee, 15 Mar 2021

  https://www.ebi.ac.uk/pride/archive/projects/PXD023140

  Dataset

• LsRTDv1, a reference transcript dataset for accurate transcript-specific RNA-seq analysis in lettuce

  Kara, M. F. (Creator), Guo, W. (Creator), Zhang, R. (Creator) & Denby, K. (Creator), University of Dundee, 23 Sept 2023

  https://www.ncbi.nlm.nih.gov/bioproject/PRJNA1018253

  Dataset

• Single-cell transcriptomics of mouse spinal cord ependymal cells

  Rodrigo Albors, A. (Creator) & Storey, K. (Creator), posit, 2022

  https://ependymalcell.shinyapps.io/ependymal_atlas/ and 2 more links, https://doi.org/10.1101/2022.03.07.483249, https://github.com/aidarodrigo/ependymal_cell (show fewer)

  Dataset

• Single-cell RNA-sequencing of spinal cord ependymal cells from FOXJ1-EGFP mice

  Rodrigo Albors, A. (Creator) & Storey, K. (Creator), EMBL-EBI, 13 Dec 2022

  https://www.ebi.ac.uk/biostudies/arrayexpress/studies/E-MTAB-11563

  Dataset

• Data from: A systems biology view of responses to lignin biosynthesis perturbations in Arabidopsis

  Vanholme, R. (Creator), Storme, V. (Creator), Vanholme, B. (Creator), Sundin, L. (Creator), Holst Christensen, J. (Creator), Goeminne, G. (Creator), Halpin, C. (Creator), Rohde, A. (Creator), Morreel, K. (Creator) & Boerjan, W. (Creator), Dryad, 21 Feb 2013

  DOI: 10.5061/dryad.jn16g, https://datadryad.org/stash/dataset/doi:10.5061/dryad.jn16g

  Dataset

• Bacterial whole genome sequencing data and annotated genome assemblies deposited in the European Nucleotide archive

  Coulthurst, S. (Creator) & Williams, D. (Creator), European Nucleotide Archive, 2019

  https://www.ebi.ac.uk/ena/browser/view/PRJEB24638 and one more link, https://www.ebi.ac.uk/ena/browser/view/PRJEB51113 (show fewer)

  Dataset