School of Life Sciences

  • United Kingdom

Research Output 1968 2020

2019

Enzymatic preparation of monoubiquitinated FANCD2 and FANCI proteins

Chaugule, V. K., Arkinson, C., Toth, R. & Walden, H., 2019, Methods in Enzymology. United States: Academic Press Inc., Vol. 618. p. 73-104 32 p. (Methods in Enzymology; vol. 618).

Research output: Chapter in Book/Report/Conference proceedingChapter

Fanconi Anemia Complementation Group D2 Protein
DNA Repair
Repair
Ubiquitination
DNA
59 Downloads (Pure)

Escherichia coli O157:H7 transcriptome datasets for comparison of RNA-seq and microarray platforms

Grabowiecka, E., Martin, D., Crozier, L. & Holden, N., Feb 2019, In : Data in Brief. 22, p. 126-131 6 p.

Research output: Contribution to journalArticle

Open Access
File
Escherichia coli O157
Transcriptome
RNA
High-Throughput Nucleotide Sequencing
Spinacia oleracea

Exome Capture for Variant Discovery and Analysis in Barley

Bayer, M., Morris, J. A., Booth, C., Booth, A., Uzrek, N., Russell, J. R., Waugh, R. & Hedley, P. E., 2019, Barley: Methods and Protocols. Harwood, W. A. (ed.). New York: Humana Press, Vol. 1900. p. 283-310 28 p. (Methods in Molecular Biology).

Research output: Chapter in Book/Report/Conference proceedingChapter (peer-reviewed)

Exome
Hordeum
Genome
Firearms
Computational Biology
1 Citation (Scopus)
22 Downloads (Pure)

Exome sequences and multi-environment field trials elucidate the genetic basis of adaptation in barley

Bustos-Korts, D., Dawson, I. K., Russell, J., Tondelli, A., Guerra, D., Ferrandi, C., Strozzi, F., Nicolazzi, E. L., Molnar-Lang, M., Ozkan, H., Megyeri, M., Miko, P., Çakır, E., Yakışır, E., Trabanco, N., Delbono, S., Kyriakidis, S., Booth, A., Cammarano, D., Mascher, M. & 7 others, Werner, P., Cattivelli, L., Rossini, L., Stein, N., Kilian, B., Waugh, R. & van Eeuwijk, F. A., 13 Sep 2019, In : Plant Journal. 99, 6, p. 1172-1191 20 p.

Research output: Contribution to journalArticle

Open Access
File
Exome
Hordeum
field experimentation
barley
Climate Change

Experimental and geochemical simulation of nickel carbonate mineral precipitation by carbonate-laden ureolytic fungal culture supernatants

Li, Q., Liu, D., Chen, C., Shao, Z., Wang, H., Liu, J., Zhang, Q. & Gadd, G. M., Jun 2019, In : Environmental Science: Nano. 6, 6, p. 1866-1875 10 p.

Research output: Contribution to journalArticle

Carbonate minerals
Carbonates
nickel
Nickel
Proteins
27 Downloads (Pure)

Exploration of the TRIM fold of MuRF1 using EPR reveals a canonical antiparallel structure and extended COS-box

Stevens, M., Franke, B., Skorupka, K. A., Cafiso, D. S., Pornillos, O., Mayans, O. & Norman, D., 12 Jul 2019, In : Journal of Molecular Biology. 431, 15, p. 2900-2909 10 p.

Research output: Contribution to journalArticle

Open Access
File
Dimerization
Proteins
Ubiquitin-Protein Ligases
Conserved Sequence
Electron Spin Resonance Spectroscopy
14 Downloads (Pure)

FAM83D directs protein kinase CK1α to the mitotic spindle for proper spindle positioning

Fulcher, L. J., He, Z., Mei, L., Macartney, T. J., Wood, N. T., Prescott, A. R., Whigham, A., Varghese, J., Gourlay, R., Ball, G., Clarke, R., Campbell, D., Maxwell, C. A. & Sapkota, G. P., 24 Jul 2019, In : EMBO Reports. p. 1-19 19 p., e47495.

Research output: Contribution to journalArticle

Open Access
File
Casein Kinase I
Spindle Apparatus
Phosphotransferases
Cells
Mitosis

Filaggrin gene loss-of-function mutations constitute a factor in patients with multiple contact allergies

Elhaji, Y., Sasseville, D., Pratt, M., Asai, Y., Matheson, K., McLean, W. H. I. & Hull, P., Jun 2019, In : Contact Dermatitis. 80, 6, p. 354-358 5 p.

Research output: Contribution to journalArticle

Hypersensitivity
Mutation
Genes
Patch Tests
Dermatitis

Following the Formation of Synaptonemal Complex Formation in Wheat and Barley by High-Resolution Microscopy

Darrier, B., Arrieta, M., Mittmann, S. U., Sourdille, P., Ramsay, L., Waugh, R. & Colas, I., 4 Oct 2019, Plant Meiosis: Methods and Protocols. Pradillo, M. & Heckmann, S. (eds.). New York: Humana Press, p. 207-215 9 p. (Methods in Molecular Biology; vol. 2061).

Research output: Chapter in Book/Report/Conference proceedingChapter (peer-reviewed)

Synaptonemal Complex
Hordeum
Genetic Recombination
Triticum
Microscopy
52 Downloads (Pure)

Full volume super-resolution imaging of thick mitotic spindle using 3D AO STED microscope

McGloin, D., Swedlow, J. & Zdankowski, P., 1 Apr 2019, In : Biomedical Optics Express. 10, 4, p. 1999-2009 11 p., #352466.

Research output: Contribution to journalArticle

Open Access
File
Spindle Apparatus
spindles
Masks
stimulated emission
depletion
18 Downloads (Pure)

Fungal formation of selenium and tellurium nanoparticles

Liang, X., Perez, M. A. M-J., Nwoko, K. C., Egbers, P., Feldmann, J., Csetenyi, L. & Gadd, G., Sep 2019, In : Applied Microbiology and Biotechnology. 103, 17, p. 7241-7259 19 p.

Research output: Contribution to journalArticle

Open Access
File
Tellurium
Selenium
Nanoparticles
Trichoderma
Selenium Oxides
9 Citations (Scopus)

Genebank genomics highlights the diversity of a global barley collection

Milner, S. G., Jost, M., Taketa, S., Mazón, E. R., Himmelbach, A., Oppermann, M., Weise, S., Knüpffer, H., Basterrechea, M., König, P., Schüler, D., Sharma, R., Pasam, R. K., Rutten, T., Guo, G., Xu, D., Zhang, J., Herren, G., Müller, T., Krattinger, S. G. & 14 others, Keller, B., Jiang, Y., González, M. Y., Zhao, Y., Habekuß, A., Färber, S., Ordon, F., Lange, M., Börner, A., Graner, A., Reif, J. C., Scholz, U., Mascher, M. & Stein, N., 2019, In : Nature Genetics. 51, p. 319-326 8 p.

Research output: Contribution to journalArticle

Hordeum
Genomics
Potyviridae
Genome-Wide Association Study
Sample Size
8 Downloads (Pure)

Genetic ablation of purine salvage in Cryptosporidium parvum reveals nucleotide uptake from the host cell

Pawlowic, M., Somepalli, M., Sateriale, A., Herbert, G. T., Gibson, A., Cuny, G. D., Hedstrom, L. & Striepen, B., 30 Sep 2019, In : Proceedings of the National Academy of Sciences. 6 p.

Research output: Contribution to journalArticle

Open Access
File
Cryptosporidium parvum
Cryptosporidium
Purine Nucleotides
Nucleotides
Parasites
43 Downloads (Pure)

Genetic Diversity and Structure of Northern Populations of the Declining Coastal Plant Eryngium maritimum

Ieviņa, B., Rostoks, N., Syed, N. H., Flavell, A. J. & Ievinsh, G., 26 Mar 2019, In : Proceedings of the Latvian Academy of Sciences, Section B: Natural, Exact, and Applied Sciences. Section B, 9 p.

Research output: Contribution to journalArticle

Open Access
File
genetic variation
Eryngium maritimum
environmental factors
retrotransposons
genetic drift

Genetic Manipulation of Cryptosporidium parvum with CRISPR/Cas9

Sateriale, A., Pawlowic, M., Vinayak, S., Brooks, C. & Striepen, B., 27 Aug 2019, Cryptosporidium. Mead, J. R. & Arrowood, M. J. (eds.). New York: Humana Press, p. 219-228 10 p. (Methods in Molecular Biology; vol. 2052).

Research output: Chapter in Book/Report/Conference proceedingChapter

Clustered Regularly Interspaced Short Palindromic Repeats
Cryptosporidium parvum
Transfection
Infection
61 Downloads (Pure)

Genetic variations in A20 DUB domain provide a genetic link to citrullination and neutrophil extracellular traps in systemic lupus erythematosus

Odqvist, L., Jevnikar, Z., Riise, R., Öberg, L., Rhedin, M., Leonard, D., Yrlid, L., Jackson, S., Mattsson, J., Nanda, S., Cohen, P., Knebel, A., Arthur, S., Thörn, K., Svenungsson, E., Jönsen, A., Gunnarsson, I., Tandre, K., Alexsson, A., Kastbom, A. & 10 others, Rantapää-Dahlqvist, S., Eloranta, M-L., Syvänen, A-C., Bengtsson, A., Johansson, P., Sandling, J. K., Sjöwall, C., Rönnblom, L., Collins, B. & Vaarala, O., 12 Jul 2019, In : Annals of the Rheumatic Diseases. 8 p.

Research output: Contribution to journalArticle

Open Access
File
Systemic Lupus Erythematosus
Polymorphism
Clustered Regularly Interspaced Short Palindromic Repeats
Genes
RNA Sequence Analysis
23 Downloads (Pure)

Genome-wide association mapping in a diverse spring barley collection reveals the presence of QTL hotspots and candidate genes for root and shoot architecture traits at seedling stage

Abdel-Ghani, A. H., Sharma, R., Wabila, C., Dhanagond, S., Owais, S. J., Duwayri, M. A., Al-Dalain, S. A., Klukas, C., Chen, D., Lübberstedt, T., von Wirén, N., Graner, A., Kilian, B. & Neumann, K., 23 May 2019, In : BMC Plant Biology. 19, p. 1-19 19 p., 216.

Research output: Contribution to journalArticle

Open Access
File
Hordeum
Seedlings
Genome
Genes
Droughts

Genome-wide association study of inhaled corticosteroid response in admixed children with asthma

Hernandez-Pacheco, N., Farzan, N., Francis, B., Karimi, L., Repnik, K., Vijverberg, S. J., Soares, P., Schieck, M., Gorenjak, M., Forno, E., Eng, C., Oh, S. S., Pérez-Méndez, L., Berce, V., Tavendale, R., Samedy, L. A., Hunstman, S., Hu, D., Meade, K., Farber, H. J. & 21 others, Avila, P. C., Serebrisky, D., Thyne, S. M., Brigino-Buenaventura, E., Rodriguez-Cintron, W., Sen, S., Kumar, R., Lenoir, M., Rodriguez-Santana, J. R., Celedón, J. C., Mukhopadhyay, S., Potočnik, U., Pirmohamed, M., Verhamme, K. M., Kabesch, M., Palmer, C. N. A., Hawcutt, D. B., Flores, C., van der Zee, A. H. M., Burchard, E. G. & Pino-Yanes, M., Jun 2019, In : Clinical and Experimental Allergy. 49, 6, p. 789-798 10 p.

Research output: Contribution to journalArticle

Genome-Wide Association Study
Adrenal Cortex Hormones
Asthma
Hispanic Americans
Population

Global geographical and historical overview of cyanotoxin distribution and cyanobacterial poisonings

Svirčev, Z., Lalić, D., Bojadžija Savić, G., Tokodi, N., Drobac Backović, D., Chen, L., Meriluoto, J. & Codd, G. A., 26 Jul 2019, In : Archives of Toxicology. 53 p.

Research output: Contribution to journalReview article

Poisons
Poisoning
Animals
Cyanobacteria
Microcystins
7 Downloads (Pure)

Glyphosate does not substitute for glycine in proteins of actively dividing mammalian cells

Antoniou, M. N., Nicolas, A., Mesnage, R., Biserni, M., Rao, F. V. & Martin, C. V., 8 Aug 2019, In : BMC Research Notes. 12, 1, p. 1-7 7 p., 494.

Research output: Contribution to journalArticle

Open Access
File
glyphosate
Glycine
Cells
Proteins
Bearings (structural)
3 Citations (Scopus)
53 Downloads (Pure)

GPR55 deficiency is associated with increased adiposity and impaired insulin signaling in peripheral metabolic tissues

Lipina, C., Walsh, S. K., Mitchell, S. E., Speakman, J. R., Wainwright, C. L. & Hundal, H., Jan 2019, In : FASEB Journal. 33, 1, p. 1299-1312 14 p.

Research output: Contribution to journalArticle

Open Access
File
Adiposity
G-Protein-Coupled Receptors
Insulin
Tissue
Insulin Resistance

Group A, B, C, and G Streptococcus Lancefield antigen biosynthesis is initiated by a conserved α-D-GlcNAc-β-1,4-L-rhamnosyltransferase

Zorzoli, A., Meyer, B. H., Adair, E., Torgov, V. I., Veselovsky, V. V., Danilov, L. L., Uhrin, D. & Dorfmueller, H. C., 10 Sep 2019, In : Journal of Biological Chemistry.

Research output: Contribution to journalArticle

Biosynthesis
Streptococcus
Carbohydrates
Antigens
Rhamnose
5 Citations (Scopus)

H4K20me0 recognition by BRCA1-BARD1 directs homologous recombination to sister chromatids

Nakamura, K., Saredi, G., Becker, J. R., Foster, B. M., Nguyen, N. V., Beyer, T. E., Cesa, L. C., Faull, P. A., Lukauskas, S., Frimurer, T., Chapman, J. R., Bartke, T. & Groth, A., 2019, In : Nature Cell Biology. 21, 3, p. 311-318 8 p.

Research output: Contribution to journalArticle

Chromatids
Homologous Recombination
Ankyrin Repeat
G2 Phase
S Phase
3 Citations (Scopus)

Harnessing the potential of germplasm collections

Langridge, P. & Waugh, R., Feb 2019, In : Nature Genetics. 51, 2, p. 200-201 2 p.

Research output: Contribution to journalComment/debate

Informatics
Food Supply
Hordeum
Genomics
Genotype
1 Citation (Scopus)

Heteroaggregation of soil particulate organic matter and biogenic selenium nanoparticles for remediation of elemental mercury contamination

Wang, X., Wang, S., Pan, X. & Gadd, G. M., Apr 2019, In : Chemosphere. 221, p. 486-492 7 p.

Research output: Contribution to journalArticle

Particulate Matter
Selenium
particulate organic matter
Remediation
Mercury
2 Citations (Scopus)
3 Downloads (Pure)

Hierarchical activation of compartmentalized pools of AMPK depends on severity of nutrient or energy stress

Zong, Y., Zhang, C-S., Li, M., Wang, W., Wang, Z., Hawley, S. A., Ma, T., Feng, J-W., Tian, X., Qi, Q., Wu, Y-Q., Zhang, C., Ye, Z., Lin, S-Y., Piao, H-L., Hardie, D. G. & Lin, S-C., 4 Apr 2019, In : Cell Research. 29, p. 460-473 14 p.

Research output: Contribution to journalArticle

Open Access
File
AMP-Activated Protein Kinases
Adenosine Monophosphate
Food
Mitochondrial Dynamics
Lysosomes

High-Level Expression in Escherichia coli, Purification and Kinetic Characterization of LAPTc, a Trypanosoma cruzi M17-Aminopeptidase

Izquierdo, M., Aguado, M. E., Zoltner, M. & González-Bacerio, J., Apr 2019, In : Protein Journal. 38, 2, p. 167-180 14 p.

Research output: Contribution to journalArticle

Leucyl Aminopeptidase
Aminopeptidases
Trypanosoma cruzi
Escherichia coli
Purification
51 Downloads (Pure)

Highlights of the mini-symposium on extracellular vesicles in inter-organismal communication, held in Munich, Germany, August 2018

Bielska, E., Birch, P. R. J., Buck, A. H., Abreu-Goodger, C., Innes, R. W., Jin, H., Pfaffl, M. W., Robatzek, S., Regev-Rudzki, N., Tisserant, C., Wang, S. & Weiberg, A., 18 Mar 2019, In : Journal of Extracellular Vesicles. 8, 1, p. 1-8 8 p., 1590116.

Research output: Contribution to journalArticle

Open Access
File
Germany
Oomycetes
Extracellular Vesicles
Cell Communication
Extracellular Matrix
2 Citations (Scopus)

Highly Selective PTK2 Proteolysis Targeting Chimeras to Probe Focal Adhesion Kinase Scaffolding Functions

Popow, J., Arnhof, H., Bader, G., Berger, H., Ciulli, A., Covini, D., Dank, C., Gmaschitz, T., Greb, P., Karolyi-Özguer, J., Koegl, M., McConnell, D. B., Pearson, M., Rieger, M., Rinnenthal, J., Roessler, V., Schrenk, A., Spina, M., Steurer, S., Trainor, N. & 4 others, Traxler, E., Wieshofer, C., Zoephel, A. & Ettmayer, P., 14 Mar 2019, In : Journal of Medicinal Chemistry. 62, 5, p. 2508–2520 13 p.

Research output: Contribution to journalArticle

Focal Adhesion Protein-Tyrosine Kinases
Proteolysis
Hepatocellular Carcinoma
Cell Line
Ubiquitin-Protein Ligases
52 Downloads (Pure)

High-resolution experimental and computational electrophysiology reveals weak β-lactam binding events in the porin PorB

Bartsch, A., Llabres, S., Pein, F., Kattner, C., Schön, M., Diehn, M., Tanabe, M., Munk, A., Zachariae, U. & Steinem, C., 4 Feb 2019, In : Scientific Reports. 9, p. 1-11 11 p., 1264.

Research output: Contribution to journalArticle

Open Access
File
Lactams
Porins
Electrophysiology
Anti-Bacterial Agents
Gram-Negative Bacteria

High-Resolution RT-PCR Analysis of Alternative Barley Transcripts

Simpson, C. G., Fuller, J., Rapazote-Flores, P., Mayer, C. D., Calixto, C. P. G., Milne, L., Hedley, P. E., Booth, C., Waugh, R. & Brown, J. W. S., 2019, Barley: Methods and Protocols. Harwood, W. A. (ed.). New York: Humana Press, Vol. 1900. p. 269-281 13 p. (Methods in Molecular Biology).

Research output: Chapter in Book/Report/Conference proceedingChapter (peer-reviewed)

Hordeum
RNA
Polymerase Chain Reaction
Protein Isoforms
Genome
Open Access
Ubiquitin-Protein Ligases
Ubiquitin
Esters
Viral Structures
Toll-Like Receptors
1 Citation (Scopus)

How Plants Grow Up

McKim, S., 18 Mar 2019, In : Journal of Integrative Plant Biology . 61, 3, p. 257-277 21 p.

Research output: Contribution to journalReview article

Bearings (structural)
Hinges
Plant Structures
Inflorescence
Crops
30 Downloads (Pure)
Open Access
File
Differential Expression
Eukaryota
RNA
Gene expression
Gene Expression
4 Citations (Scopus)

Human and computational models of atopic dermatitis: A review and perspectives by an expert panel of the International Eczema Council

Eyerich, K., Brown, S. J., Perez White, B. E., Tanaka, R. J., Bissonette, R., Dhar, S., Bieber, T., Hijnen, D. J., Guttman-Yassky, E., Irvine, A., Thyssen, J. P., Vestergaard, C., Werfel, T., Wollenberg, A., Paller, A. S. & Reynolds, N. J., 1 Jan 2019, In : Journal of Allergy and Clinical Immunology. 143, 1, p. 36-45 10 p.

Research output: Contribution to journalArticle

Eczema
Atopic Dermatitis
Therapeutics
Biological Models
Precision Medicine
8 Citations (Scopus)

Hypoxia induces rapid changes to histone methylation and reprograms chromatin

Batie, M., Frost, J., Frost, M., Wilson, J. W., Schofield, P. & Rocha, S., 15 Mar 2019, In : Science. 363, 6432, p. 1222-1226 5 p.

Research output: Contribution to journalArticle

Histone Demethylases
Histones
Methylation
Chromatin
Dioxygenases

Identification and characterisation of Helicobacter pylori O-acetylserine-dependent cystathionine β-synthase, a distinct member of the PLP-II family

Devi, S., Tarique, K. F., Ali, M. F., Abdul Rehman, S. A. & Gourinath, S., 21 Aug 2019, In : Molecular Microbiology. 112, 2, p. 718-739 22 p.

Research output: Contribution to journalArticle

Cystathionine
Helicobacter pylori
Cysteine Synthase
Serine
Cysteine

Identification of Endogenous Adenomatous Polyposis Coli Interaction Partners and β-Catenin-Independent Targets by Proteomics

Popow, O., Paulo, J. A., Tatham, M., Volk, M., Rojas-Fernandez, A., Loyer, N., Newton, I., Januschke, J., Haigis, K. M. & Nathke, I., Sep 2019, In : Molecular Cancer Research. 17, 9, p. 1828-1841 14 p.

Research output: Contribution to journalArticle

Catenins
Adenomatous Polyposis Coli
Proteomics
Phosphotransferases
Colorectal Neoplasms
3 Citations (Scopus)

Identification of GSK3186899/DDD853651 as a Preclinical Development Candidate for the Treatment of Visceral Leishmaniasis

Thomas, M. G., De Rycker, M., Ajakane, M., Albrecht, S., Álvarez-Pedraglio, A. I., Boesche, M., Brand, S., Campbell, L., Cantizani-Perez, J., Cleghorn, L. A. T., Copley, R. C. B., Crouch, S. D., Daugan, A., Drewes, G., Ferrer, S., Ghidelli-Disse, S., Gonzalez, S., Gresham, S. L., Hill, A. P., Hindley, S. J. & 32 others, Lowe, R. M., MacKenzie, C. J., MacLean, L., Manthri, S., Martin, F., Miguel-Siles, J., Nguyen, V. L., Norval, S., Osuna-Cabello, M., Woodland, A., Patterson, S., Pena, I., Quesada-Campos, M. T., Reid, I. H., Revill, C., Riley, J., Ruiz-Gomez, J. R., Shishikura, Y., Simeons, F. R. C., Smith, A., Smith, V. C., Spinks, D., Stojanovski, L., Thomas, J., Thompson, S., Underwood, T., Gray, D. W., Fiandor, J. M., Gilbert, I. H., Wyatt, P. G., Read, K. D. & Miles, T. J., 14 Feb 2019, In : Journal of Medicinal Chemistry. 62, 3, p. 1180-1202 23 p.

Research output: Contribution to journalArticle

Visceral Leishmaniasis
Leishmania major
Leishmania donovani
Standard of Care
Solubility
26 Downloads (Pure)

Identification of inhibitors of an unconventional Trypanosoma brucei kinetochore kinase

Torrie, L., Zuccotto, F., Robinson, D., Gray, D., Gilbert, I. & De Rycker, M., 31 May 2019, In : PLoS ONE. 14, 5, p. 1-16 16 p., e0217828.

Research output: Contribution to journalArticle

Open Access
File
Kinetochores
Trypanosoma brucei
kinetochores
Trypanosoma brucei brucei
phosphotransferases (kinases)
2 Citations (Scopus)
53 Downloads (Pure)

Identification of Leishmania major UDP-Sugar Pyrophosphorylase Inhibitors Using Biosensor-Based Small Molecule Fragment Library Screening

Prakash, O., Führing, J., Post, J., Shepherd, S. M., Eadsforth, T. C., Gray, D., Fedorov, R. & Routier, F. H., 12 Mar 2019, In : Molecules and Cells. 24, 5, p. 1-16 16 p., 996.

Research output: Contribution to journalArticle

Open Access
File
Uridine Diphosphate Sugars
Small Molecule Libraries
Leishmania major
Biosensing Techniques
sugars
14 Downloads (Pure)

Identification of Novel Trypanosoma cruzi Proteasome Inhibitors Using a Luminescence-Based High-Throughput Screening Assay

Zmuda, F., Sastry, L., Shepherd, S. M., Jones, D., Scott, A., Craggs, P. D., Cortes, A., Gray, D. W., Torrie, L. S. & De Rycker, M., Sep 2019, In : Antimicrobial Agents and Chemotherapy. 63, 9, p. 1-15 15 p., e00309-19.

Research output: Contribution to journalArticle

Open Access
File
High-Throughput Screening Assays
Proteasome Inhibitors
Trypanosoma cruzi
Proteasome Endopeptidase Complex
Luminescence
1 Citation (Scopus)
96 Downloads (Pure)

IL-33 regulates cytokine production and neutrophil recruitment via the p38 MAPK-activated kinases MK2/3

McCarthy, P. C., Phair, I. R., Greger, C., Pardali, K., McGuire, V. A., Clark, A. R., Gaestel, M. & Arthur, J. S. C., 17 Jan 2019, In : Immunology and Cell Biology. 97, 1, p. 54-71 18 p.

Research output: Contribution to journalArticle

Open Access
File
Neutrophil Infiltration
Mitogen-Activated Protein Kinase Kinases
p38 Mitogen-Activated Protein Kinases
Mast Cells
Cytokines

Immobilization of elemental mercury by biogenic Se nanoparticles in soils of varying salinity

Wang, X., Pan, X. & Gadd, G. M., 10 Jun 2019, In : Science of the Total Environment. 668, p. 303-309 7 p.

Research output: Contribution to journalArticle

Mercury
Selenium
immobilization
selenium
Nanoparticles
11 Downloads (Pure)

Increased autophagy in EphrinB2-deficient osteocytes is associated with elevated secondary mineralization and brittle bone

Vrahnas, C., Blank, M., Dite, T. A., Tatarczuch, L., Ansari, N., Crimeen-Irwin, B., Nguyen, H., Forwood, M. R., Hu, Y., Ikegame, M., Bambery, K. R., Petibois, C., Mackie, E. J., Tobin, M. J., Smyth, G. K., Oakhill, J. S., Martin, T. J. & Sims, N. A., 31 Jul 2019, In : Nature Communications. 10, 1, 16 p., 3436.

Research output: Contribution to journalArticle

Open Access
File
Osteocytes
Physiologic Calcification
Autophagy
bones
Bone

Inhibition of CorA dependent Magnesium Homeostasis is cidal in Mycobacterium tuberculosis

Park, Y., Ahn, Y-M., Jonnala, S., Oh, S., Fisher, J. M., Goodwin, M. B., Loerger, T. R., Via, L. E., Bayliss, T., Green, S. R., Ray, P. C., Wyatt, P. G., Barry, C. E. & Boshoff, H. I., 23 Sep 2019, In : Antimicrobial Agents and Chemotherapy. 63, 10, p. 1-14 14 p., e01006-19.

Research output: Contribution to journalArticle

Mycobacterium tuberculosis
Magnesium
Homeostasis
Amides
Symporters
1 Citation (Scopus)
67 Downloads (Pure)

Insights into evolving global populations of Phytophthora infestans via new complementary mtDNA haplotype markers and nuclear SSRs

Martin, F. N., Zhang, Y., Cooke, D. E. L., Coffey, M. D., Grünwald, N. J. & Fry, W. E., 2 Jan 2019, In : PLoS ONE. 14, 1, p. 1-24 24 p., e0208606.

Research output: Contribution to journalArticle

Open Access
File
Phytophthora infestans
Mitochondrial DNA
Haplotypes
haplotypes
mitochondrial DNA
11 Downloads (Pure)

Integrative construction of regulatory region networks in 127 human reference epigenomes by matrix factorization

Liu, D., Davila-Velderrain, J., Zhang, Z. & Kellis, M., 22 Aug 2019, In : Nucleic Acids Research. 47, 14, p. 7235-7246 12 p.

Research output: Contribution to journalArticle

Open Access
File
Nucleic Acid Regulatory Sequences
Chromatin
Information Storage and Retrieval
Epigenomics
Genes
3 Citations (Scopus)

Investigating Mitophagy and Mitochondrial Morphology In Vivo Using mito-QC: A Comprehensive Guide

McWilliams, T. G. & Ganley, I. G., 2019, Autophagy: Methods and Protocols. Ktistakis, N. & Florey, O. (eds.). New York: Humana Press, Vol. 1880. p. 621-642 22 p. (Methods in Molecular Biology; vol. 1880).

Research output: Chapter in Book/Report/Conference proceedingChapter (peer-reviewed)

Mitochondrial Degradation
Quality Control
Autophagy
Organelles
Homeostasis
Open Access
Nanocomposites
Urinary Catheters
Polytetrafluoroethylene
Silver
Catheters