Keyphrases
Pseudouridine
55%
Molecular Dynamics Simulation
41%
Amber
33%
N1-methylpseudouridine
29%
Fragment Molecular Orbital Method
29%
Reparameterization
29%
Riboswitch
29%
RNA Duplex
29%
Conformational Preferences
28%
Force Field
26%
Modified RNA
26%
Residence Time
24%
Conformational Characteristics
24%
Torsion Parameters
23%
Methyl Derivatives
23%
Ligand Unbinding
23%
Bacterial RNA Polymerase
19%
RNA Polymerase Pausing
19%
RNA-dependent RNA Polymerase (RdRP)
19%
Modified Uridine
19%
Ligand Binding
19%
Inosine
19%
Free Energy
19%
Nucleosides
18%
Transfer RNA (tRNA)
15%
Small Molecules
15%
Force Field Parameters
13%
Molecular Simulation
13%
NMR Studies
13%
Sugar Pucker
12%
Dihydrouridine
12%
Conformational Properties
11%
Dynamic Stability
11%
Thermodynamics
11%
RNA Ligands
11%
Nearest Neighbor
11%
Enhanced Sampling
11%
Torsion
11%
RNA Structure
10%
Data Parallelism
9%
Loop Domain
9%
Lennard-Jones Parameters
9%
Destabilizing Effect
9%
Therapeutic Aptamers
9%
Locked nucleic Acid
9%
Explicit Water Model
9%
Potential Scaling
9%
Steered Molecular Dynamics
9%
RNA Recognition
9%
Nascent RNA
9%
Biochemistry, Genetics and Molecular Biology
RNA
100%
Pseudouridine
62%
Computer Simulation
49%
Dynamics
30%
Nucleoside
30%
Riboswitch
29%
Ligand Binding
27%
Retention Time
25%
Uridine
23%
RNA Polymerase
19%
Sampling
18%
Aptamer
15%
Messenger RNA
14%
Conformation
14%
Transfer RNA
13%
Dihydrouridine
13%
Transcription
11%
Protein Secondary Structure
11%
Adenosine
11%
RNA Structure
10%
Biogenesis
9%
Quantum Mechanics
9%
Anticodon
9%
Flavin Mononucleotide
9%
Locked Nucleic Acid
9%
Stem-Loop
9%
Escherichia coli
9%
Codon
9%
G Protein Coupled Receptor
9%
Inosine
9%
Potential Energy Function
8%
Binding Affinity
6%
Post-Transcriptional Modification
6%
Structure Prediction
5%
Energy Transfer
5%
Oligonucleotide
5%
