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Personal profile

External positions

Principal Investigator, The James Hutton Institute

6 Jan 2003 → …

Fingerprint Fingerprint is based on mining the text of the person's scientific documents to create an index of weighted terms, which defines the key subjects of each individual researcher.

Solanum tuberosum Medicine & Life Sciences
Phytophthora infestans Medicine & Life Sciences
Genes Medicine & Life Sciences
potatoes Agriculture & Biology
genes Agriculture & Biology
Oomycetes Agriculture & Biology
pathogens Agriculture & Biology
hypersensitive response Agriculture & Biology

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Research Output 2001 2019

A critical comparison of technologies for a plant genome sequencing project

Paajanen, P., Kettleborough, G., Lopez-Girona, E., Giolai, M., Heavens, D., Baker, D., Lister, A., Wilde, G., Hein, I., Macaulay, I., Bryan, G. J. & Clark, M. D., 9 Jan 2019, In : Giga Science.

Research output: Contribution to journalArticle

Open Access
File
genome assembly
genome
genomics
plant biology
DNA
3 Citations

Albugo candida race diversity, ploidy and host-associated microbes revealed using DNA sequence capture on diseased plants in the field

Jouet, A., Saunders, D. G. O., McMullan, M., Ward, B., Furzer, O., Jupe, F., Cevik, V., Hein, I., Thilliez, G. J. A., Holub, E., Oosterhout, C. V. & Jones, J. D. G., Feb 2019, In : New Phytologist. 221, 3, p. 1529-1543 15 p.

Research output: Contribution to journalArticle

Open Access
File
Albugo candida
Plant Diseases
Ploidies
ploidy
Candida

Mapping the H2 resistance effective against Globodera pallida pathotype Pa1 in tetraploid potato

Strachan, S. M. ., Armstrong, M. R., Kaur, A., Wright, K. M., Lim, T. Y., Jones, J., Bryan, G. J., Blok, V. & Hein, I., 21 Jan 2019, In : Theoretical and Applied Genetics. 12 p.

Research output: Contribution to journalArticle

Open Access
File
Globodera pallida
Tetraploidy
pathotypes
Solanum tuberosum
tetraploidy

Phytophthora infestans RXLR effectors act in concert at diverse subcellular locations to enhance host colonization

Wang, S., McLellan, H., Bukharova, T., He, Q., Murphy, F., Shi, J., Sun, S., van Weymers, P., Ren, Y., Thilliez, G., Wang, H., Chen, X., Engelhardt, S., Vleeshouwers, V., Gilroy, E. M., Whisson, S. C., Hein, I., Wang, X., Tian, Z., Birch, P. R. J. & 1 othersBoevink, P. C., 1 Jan 2019, In : Journal of Experimental Botany. 70, 1, p. 343-356 14 p., ery360.

Research output: Contribution to journalArticle

Open Access
File
Phytophthora infestans
Nicotiana benthamiana
Tobacco
pathogens
Infection

BLASTmap: A Shiny-Based Application to Visualize BLAST Results as Interactive Heat Maps and a Tool to Design Gene-Specific Baits for Bespoke Target Enrichment Sequencing

Baker, K., Stephen, G., Strachan, S., Armstrong, M. & Hein, I., 2018, Plant Pathogenic Fungi and Oomycetes. Ma, W. & Wolpert, T. (eds.). New York: Humana Press, Vol. 1848. p. 199-206 8 p. (Methods in Molecular Biology).

Research output: Chapter in Book/Report/Conference proceedingChapter

Hot Temperature
Genes
RNA Probes
Disease Resistance
DNA Probes

Thesis

A functional study of the Phytophthora infestans Avr3a alleles and paralogs

Author: Seman, Z. A., 2013

Supervisor: Birch, P. (Supervisor) & Hein, I. (Supervisor)

Student thesis: Doctoral ThesisDoctor of Philosophy

File

Applying effectoromics and genomics to identify resistance against Rhynchosporium commune in barley

Author: Griffe, L. L., 2017

Supervisor: Avrova, A. (Supervisor), Hein, I. (Supervisor) & Birch, P. (Supervisor)

Student thesis: Doctoral ThesisDoctor of Philosophy

File

Engineering durable late blight resistance to protect solanaceous plants

Author: Stevens, L. J., 2016

Supervisor: Birch, P. (Supervisor), Chapman, S. (External person) (Supervisor) & Hein, I. (Supervisor)

Student thesis: Doctoral ThesisDoctor of Philosophy

File

Identification of new functional resistance genes against P. infestans in Solanaceae species

Author: Van Weymers, P. S. M., 2016

Supervisor: Birch, P. (Supervisor), Hein, I. (Supervisor) & Cooke, D. (Supervisor)

Student thesis: Doctoral ThesisDoctor of Philosophy

File

The Role of Phytophthora Secreted Effectors in Determining Pathogen Host Range

Author: Thilliez, G. J. A., 2016

Supervisor: Huitema, E. (Supervisor), Hein, I. (Supervisor), Gilroy, E. (Supervisor) & Birch, P. (Supervisor)

Student thesis: Doctoral ThesisDoctor of Philosophy