Brown, John

Professor

  • Professor & Personal Chair of Molecular Plant Sciences, Plant Sciences
1989 …2020
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Personal profile

Education/Academic qualification

Doctor of Philosophy, University of Cambridge

Bachelor of Science, University of Edinburgh

Keywords

  • QH301 Biology
  • gene expression
  • RNA splicing

Fingerprint Dive into the research topics where John Brown is active. These topic labels come from the works of this person. Together they form a unique fingerprint.

  • 10 Similar Profiles
Alternative Splicing Medicine & Life Sciences
Arabidopsis Medicine & Life Sciences
alternative splicing Agriculture & Biology
Circadian Clocks Medicine & Life Sciences
Genes Medicine & Life Sciences
Proteins Medicine & Life Sciences
RNA Medicine & Life Sciences
Hordeum Medicine & Life Sciences

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Research Output 1989 2019

34 Downloads (Pure)

Cold-Dependent Expression and Alternative Splicing of Arabidopsis Long Non-coding RNAs

Calixto, C., Tzioutziou, N., James, A. B., Hornyik, C., Guo, W., Zhang, R., Nimmo, H. G. & Brown, J., 28 Feb 2019, In : Frontiers in Plant Science. 10, p. 1-16 16 p., 235.

Research output: Contribution to journalArticle

Open Access
File
alternative splicing
Arabidopsis
small interfering RNA
time series analysis
temperature
9 Citations (Scopus)

Light Regulates Plant Alternative Splicing through the Control of Transcriptional Elongation

Godoy Herz, M. A., Kubaczka, M. G., Brzyżek, G., Servi, L., Krzyszton, M., Simpson, C., Brown, J., Swiezewski, S., Petrillo, E. & Kornblihtt, A. R., 7 Mar 2019, In : Molecular Cell. 73, 5, p. 1066-1074.e3 13 p.

Research output: Contribution to journalArticle

Alternative Splicing
Light
Chloroplasts
Arabidopsis
Carbon Cycle
3 Citations (Scopus)
86 Downloads (Pure)

How does temperature affect splicing events? Isoform switching of splicing factors regulates splicing of LATE ELONGATED HYPOCOTYL (LHY)

James, A. B., Calixto, C. P. G., Tzioutziou, N. A., Guo, W., Zhang, R., Simpson, C. G., Jiang, W., Nimmo, G. A., Brown, J. W. S. & Nimmo, H. G., 1 Jul 2018, In : Plant, Cell & Environment. 41, 7, p. 1539-1550 12 p.

Research output: Contribution to journalArticle

Open Access
File
Hypocotyl
hypocotyls
Protein Isoforms
Temperature
temperature
23 Citations (Scopus)
79 Downloads (Pure)

Rapid and dynamic alternative splicing impacts the Arabidopsis cold response transcriptome

Calixto, C. P. G., Guo, W., James, A. B., Tzioutziou, N. A., Entizne, J. C., Panter, P. E., Knight, H., Nimmo, H., Zhang, R. & Brown, J. W. S., 1 Jul 2018, In : Plant Cell. 30, 7, p. 1424-1444 21 p.

Research output: Contribution to journalArticle

Open Access
File
alternative splicing
Alternative Splicing
Transcriptome
Arabidopsis
transcriptome
43 Citations (Scopus)
142 Downloads (Pure)

A high quality Arabidopsis transcriptome for accurate transcript-level analysis of alternative splicing

Zhang, R., Calixto, C. P. G., Marquez, Y., Venhuizen, P., Tzioutziou, N. A., Guo, W., Spensley, M., Entizne, J. C., Lewandowska, D., ten Have, S., Frei dit Frey, N., Hirt, H., James, A. B., Nimmo, H. G., Barta, A., Kalyna, M. & Brown, J. W. S., 19 May 2017, In : Nucleic Acids Research. 45, 9, p. 5061-5073 13 p.

Research output: Contribution to journalArticle

Open Access
File
Alternative Splicing
Transcriptome
Arabidopsis
Protein Isoforms
RNA

Thesis

Alternative splicing in the regulation of the barley circadian clock

Author: Calixto, C. P. G., 2013

Supervisor: Brown, J. (Supervisor)

Student thesis: Doctoral ThesisDoctor of Philosophy

File

An investigation of gene expression, alternative splicing and nonsense-mediated decay in potato in response to Phytophthora infestans infection

Author: Domingo Torres, E., 2019

Supervisor: Brown, J. (Supervisor), Simpson, C. (Supervisor) & Hein, I. (Supervisor)

Student thesis: Doctoral ThesisDoctor of Philosophy

Computational analysis and method development for high throughput transcriptomics and transcriptional regulatory inference in plants

Author: Guo, W., 2018

Supervisor: Zhang, R. (Supervisor), Brown, J. (Supervisor), Waugh, R. (Supervisor) & Lin, P. (Supervisor)

Student thesis: Doctoral ThesisDoctor of Philosophy

Investigating the role of Arabidopsis flowering regulator FPA in plant development and control of alternative polyadenylation

Author: Lishak, E., 2017

Supervisor: Brown, J. (Supervisor) & Simpson, G. (Supervisor)

Student thesis: Master's ThesisMaster of Philosophy

File

Regulation of low-temperature alternative splicing in the Arabidopsis thaliana circadian clock genes

Author: Tzioutziou, N., 2016

Supervisor: Brown, J. (Supervisor)

Student thesis: Doctoral ThesisDoctor of Philosophy