• 724 Citations
  • 11 h-Index
20042022

Research output per year

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Research Output

2019

Aggregation of nontuberculous mycobacteria is regulated by carbon-nitrogen balance

Depas, W. H., Bergkessel, M. & Newman, D. K., Aug 2019, In : MBio. 10, 4, p. 1-17 17 p., e01715-19.

Research output: Contribution to journalArticle

Open Access
File
1 Citation (Scopus)
66 Downloads (Pure)

Nontuberculous Mycobacterial Aggregation is Regulated by C:N Balance

DePas, W., Bergkessel, M. & Newman, D. K., Oct 2019, In : Pediatric Pulmonology. 54, S2, p. S310 1 p., 411.

Research output: Contribution to journalConference article

The dormancy-specific regulator, SutA, is intrinsically disordered and modulates transcription initiation in Pseudomonas aeruginosa

Bergkessel, M., Babin, B. M., VanderVelde, D., Sweredoski, M. J., Moradian, A., Eggleston-Rangel, R., Hess, S., Tirrell, D. A., Artsimovitch, I. & Newman, D. K., 10 Sep 2019, In : Molecular Microbiology. 112, 3, p. 992-1009 18 p.

Research output: Contribution to journalArticle

1 Citation (Scopus)
2018

Erratum for Basta et al., "Identification of Fitness Determinants during Energy-Limited Growth Arrest in Pseudomonas aeruginosa"

Basta, D. W., Bergkessel, M. & Newman, D. K., 10 Apr 2018, In : MBio. 9, 2, 1 p., e00576-18.

Research output: Contribution to journalComment/debate

Open Access
File
52 Downloads (Pure)
2017

Aggregation of Nontuberculous Mycobacteria in Vitro and in Situ

DePas, W., Bergkessel, M. & Newman, D. K., Sep 2017, In : Pediatric Pulmonology. 52, S47, p. S342 1 p., 336.

Research output: Contribution to journalConference article

Identification of Fitness Determinants during Energy-Limited Growth Arrest in Pseudomonas aeruginosa

Basta, D. W., Bergkessel, M. & Newman, D. K., Dec 2017, In : MBio. 8, 6, p. 1-18 18 p., e01170-17.

Research output: Contribution to journalArticle

Open Access
File
8 Citations (Scopus)
53 Downloads (Pure)

SutA is a Global Transcriptional Regulator Operating during Slow Growth in Pseudomonas Aeruginosa

Bergkessel, M., Newman, D. K., Babin, B. & Tirrell, D. A., Sep 2017, In : Pediatric Pulmonology. 52, S47, p. S366-S367 2 p., 397.

Research output: Contribution to journalConference article

2016

Evolutionarily conserved polyadenosine RNA binding protein Nab2 cooperates with splicing machinery to regulate the fate of pre-mRNA

Soucek, S., Zeng, Y., Bellur, D. L., Bergkessel, M., Morris, K. J., Deng, Q., Duong, D., Seyfried, N. T., Guthrie, C., Staley, J. P., Fasken, M. B. & Corbett, A. H., Nov 2016, In : Molecular and Cellular Biology. 36, 21, p. 2697-2714 18 p.

Research output: Contribution to journalArticle

12 Citations (Scopus)

SutA is a bacterial transcription factor expressed during slow growth in Pseudomonas aeruginosa

Babin, B. M., Bergkessel, M., Sweredoski, M. J., Moradian, A., Hess, S., Newman, D. K. & Tirrell, D. A., 2 Feb 2016, In : Proceedings of the National Academy of Sciences of the United States of America. 113, 5, p. E597-E605 9 p.

Research output: Contribution to journalArticle

22 Citations (Scopus)

The physiology of growth arrest: Uniting molecular and environmental microbiology

Bergkessel, M., Basta, D. W. & Newman, D. K., Sep 2016, In : Nature Reviews Microbiology. 14, 9, p. 549-562 14 p.

Research output: Contribution to journalReview article

49 Citations (Scopus)
2015

Enzymatic degradation of phenazines can generate energy and protect sensitive organisms from toxicity

Costa, K. C., Bergkessel, M., Saunders, S., Korlach, J. & Newman, D. K., Dec 2015, In : MBio. 6, 6, p. 1-10 10 p., e01520-15.

Research output: Contribution to journalArticle

Open Access
File
18 Citations (Scopus)
2014

Selective proteomics in bacterial dormancy: Enrichment of proteins synthesized by pseudomonas aeruginosa reveals a novel regulator

Babin, B. M., Bergkessel, M., Newman, D. K. & Tirrell, D. A., 2014, Food, Pharmaceutical and Bioengineering Division 2014 - Core Programming Area at the 2014 AIChE Annual Meeting. AIChE, Vol. 1. p. 116 1 p. 387795

Research output: Chapter in Book/Report/Conference proceedingConference contribution

The upper respiratory tract as a microbial source for pulmonary infections in cystic fibrosis: Parallels from island biogeography

Whiteson, K. L., Bailey, B., Bergkessel, M., Conrad, D., Delhaes, L., Felts, B., Harris, J. K., Hunter, R., Lim, Y. W., Maughan, H., Quinn, R., Salamon, P., Sullivan, J., Wagner, B. D. & Rainey, P. B., 1 Jun 2014, In : American Journal of Respiratory and Critical Care Medicine. 189, 11, p. 1309-1315 7 p.

Research output: Contribution to journalArticle

51 Citations (Scopus)
2013

Chemical Transformation of Yeast

Bergkessel, M. & Guthrie, C., 2013, Laboratory Methods in Enzymology: DNA. Lorsch, J. (ed.). Academic Press Inc., Vol. 529. p. 311-320 10 p. (Methods in Enzymology; vol. 529).

Research output: Chapter in Book/Report/Conference proceedingChapter

4 Citations (Scopus)

Colony PCR

Bergkessel, M. & Guthrie, C., 2013, Laboratory Methods in Enzymology: DNA. Lorsch, J. (ed.). Academic Press Inc., Vol. 529. p. 299-309 11 p. (Methods in Enzymology; vol. 529).

Research output: Chapter in Book/Report/Conference proceedingChapter

22 Citations (Scopus)

Yeast-gene replacement using PCR products

Bergkessel, M., Guthrie, C. & Abelson, J., 2013, Laboratory Methods in Enzymology: Cell, Lipid and Carbohydrate. Lorsch, J. (ed.). Academic Press Inc., Vol. 533. p. 43-55 13 p. (Methods in Enzymology; vol. 533).

Research output: Chapter in Book/Report/Conference proceedingChapter

2011

Diverse environmental stresses elicit distinct responses at the level of pre-mRNA processing in yeast

Bergkessel, M., Whitworth, G. B. & Guthrie, C., Aug 2011, In : RNA. 17, 8, p. 1461-1478 18 p.

Research output: Contribution to journalArticle

38 Citations (Scopus)
2009

SnapShot: Formation of mRNPs

Bergkessel, M., Wilmes, G. M. & Guthrie, C., 20 Feb 2009, In : Cell. 136, 4, p. 794-794.e1 2 p.

Research output: Contribution to journalShort survey

1 Citation (Scopus)
2008

A Genetic Interaction Map of RNA-Processing Factors Reveals Links between Sem1/Dss1-Containing Complexes and mRNA Export and Splicing

Wilmes, G. M., Bergkessel, M., Bandyopadhyay, S., Shales, M., Braberg, H., Cagney, G., Collins, S. R., Whitworth, G. B., Kress, T. L., Weissman, J. S., Ideker, T., Guthrie, C. & Krogan, N. J., 5 Dec 2008, In : Molecular Cell. 32, 5, p. 735-746 12 p.

Research output: Contribution to journalArticle

182 Citations (Scopus)
2007

Rapid, Transcript-Specific Changes in Splicing in Response to Environmental Stress

Pleiss, J. A., Whitworth, G. B., Bergkessel, M. & Guthrie, C., 21 Sep 2007, In : Molecular Cell. 27, 6, p. 928-937 10 p.

Research output: Contribution to journalArticle

145 Citations (Scopus)

Transcript specificity in yeast pre-mRNA splicing revealed by mutations in core spliceosomal components

Pleiss, J. A., Whitworth, G. B., Bergkessel, M. & Guthrie, C., 27 Mar 2007, In : PLoS Biology. 5, 4, p. 745-757 13 p.

Research output: Contribution to journalArticle

Open Access
File
144 Citations (Scopus)
50 Downloads (Pure)
2004

An essential role for the Saccharomyces cerevisiae DEAD-box helicase DHH1 in G1/S DNA-damage checkpoint recovery

Bergkessel, M. & Reese, J. C., 1 May 2004, In : Genetics. 167, 1, p. 21-33 13 p.

Research output: Contribution to journalArticle

26 Citations (Scopus)