BioStudies and the Image Data Resource: Expanding Imaging Datasets, Linkage, Metadata and Value (Joint with EMBL-EBI) (Bioinformatics and Biological Resources Fund - BBR)

Swedlow, Jason (Investigator)

Molecular Cell and Developmental Biology

Status	Finished
Effective start/end date	1/07/18 → 30/06/21

Funding

Biotechnology and Biological Sciences Research Council (BB/R015384/1): £583,944.00

4 Article
1 Conference contribution
1 Comment/debate
1 Conference article
More
- 1 Letter

OME-Zarr: a cloud-optimized bioimaging file format with international community support
Moore, J. (Lead / Corresponding author), Basurto-Lozada, D., Besson, S., Bogovic, J., Bragantini, J., Brown, E. M., Burel, J.-M., Casas Moreno, X., de Medeiros, G., Diel, E. E., Gault, D., Ghosh, S. S., Gold, I., Halchenko, Y. O., Hartley, M., Horsfall, D., Keller, M. S., Kittisopikul, M., Kovacs, G. & Küpcü Yoldaş, A. & 49 others, Kyoda, K., le Tournoulx de la Villegeorges, A., Li, T., Liberali, P., Lindner, D., Linkert, M., Lüthi, J., Maitin-Shepard, J., Manz, T., Marconato, L., McCormick, M., Lange, M., Mohamed, K., Moore, W., Norlin, N., Ouyang, W., Özdemir, B., Palla, G., Pape, C., Pelkmans, L., Pietzsch, T., Preibisch, S., Prete, M., Rzepka, N., Samee, S., Schaub, N., Sidky, H., Solak, A. C., Stirling, D. R., Striebel, J., Tischer, C., Toloudis, D., Virshup, I., Walczysko, P., Watson, A. M., Weisbart, E., Wong, F., Yamauchi, K. A., Bayraktar, O., Cimini, B. A., Gehlenborg, N., Haniffa, M., Hotaling, N., Onami, S., Royer, L. A., Saalfeld, S., Stegle, O., Theis, F. J. & Swedlow, J. R., Sept 2023, In: Histochemistry and Cell Biology. 160, p. 223–251 29 p.
Research output: Contribution to journal › Article › peer-review

Open Access
File
28 Citations (Scopus)

105 Downloads (Pure)
The BioImage Archive - building a home for life-sciences microscopy data
Hartley, M., Kleywegt, G. J., Patwardhan, A., Sarkans, U., Swedlow, J. R. & Brazma, A., 15 Jun 2022, In: Journal of Molecular Biology. 434, 11, 8 p., 167505.
Research output: Contribution to journal › Article › peer-review

Open Access
File
51 Citations (Scopus)

223 Downloads (Pure)
MDEmic: a metadata annotation tool to facilitate management of FAIR image data in the bioimaging community
Kunis, S. (Lead / Corresponding author), Hänsch, S., Schmidt, C., Wong, F., Strambio-De-Castillia, C. & Weidtkamp-Peters, S. (Lead / Corresponding author), Dec 2021, In: Nature Methods. 18, p. 1416-1417 2 p.
Research output: Contribution to journal › Letter › peer-review

Open Access

14 Citations (Scopus)

BioStudies and the Image Data Resource: Expanding Imaging Datasets, Linkage, Metadata and Value (Joint with EMBL-EBI) (Bioinformatics and Biological Resources Fund - BBR)

Project Details

Funding

Fingerprint

OME-Zarr: a cloud-optimized bioimaging file format with international community support

The BioImage Archive - building a home for life-sciences microscopy data

MDEmic: a metadata annotation tool to facilitate management of FAIR image data in the bioimaging community

BioStudies and the Image Data Resource: Expanding Imaging Datasets, Linkage, Metadata and Value (Joint with EMBL-EBI) (Bioinformatics and Biological Resources Fund - BBR)

Project Details

Funding

Fingerprint

Research output

OME-Zarr: a cloud-optimized bioimaging file format with international community support

The BioImage Archive - building a home for life-sciences microscopy data

MDEmic: a metadata annotation tool to facilitate management of FAIR image data in the bioimaging community