MICA: InterdisciPlInary Collaboration for EfficienT and Effective Use of Clinical Images in Big Data Health Care RESearch: PICTURES (Programme Grant) (Joint with Universities of Edinburgh and Abertay)

2024

The Scottish Medical Imaging Archive: 57.3 million Radiology Studies Linked to their Medical Records

Baxter, R., Nind, T., Sutherland, J., McAllister, G., Hardy, D., Hume, A., MacLeod, R., Caldwell, J., Krueger, S., Tramma, L., Teviotdale, R., Gillen, K., Scobie, D., Bailie, I., Brooks, A., Prodan, B., Kerr, W., Sloan-Murphy, D., Herrera, J. F. R. & van Beek, E. J. R. & 12 others, Reel, P. S., Reel, S., Mansouri-Benssassi, E., Mudie, R., Steele, D., Doney, A., Trucco, E., Morris, C., Wallace, R., Morris, A., Parsons, M. & Jefferson, E. (Lead / Corresponding author), Jan 2024, In: Radiology: Artificial Intelligence. 6, 1, 6 p., e220266.

Research output: Contribution to journal › Article › peer-review

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6 Citations (Scopus)

78 Downloads (Pure)

2023

Disclosure control of machine learning models from trusted research environments (TRE): New challenges and opportunities

Mansouri-Benssassi, E., Rogers, S., Reel, S., Malone, M., Smith, J., Ritchie, F. & Jefferson, E. (Lead / Corresponding author), Apr 2023, In: Heliyon. 9, 4, 11 p., e15143.

Research output: Contribution to journal › Review article › peer-review

Open Access

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2 Citations (Scopus)

77 Downloads (Pure)

Machine learning models in trusted research environments - understanding operational risks

Ritchie, F. (Lead / Corresponding author), Tilbrook, A., Cole, C., Jefferson, E., Krueger, S., Mansouri-Benssassi, E., Rogers, S. & Smith, J., 14 Dec 2023, In: International Journal of Population Data Science. 8, 1, 9 p., 30.

Research output: Contribution to journal › Article › peer-review

Open Access

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71 Downloads (Pure)

2022

A National Network of Safe Havens: Scottish Perspective

Gao, C., McGilchrist, M., Mumtaz, S., Hall, C., Anderson, L., Zurowski, J., Gordon, S., Lumsden, J., Munro, V., Wozniak, A., Sibley, M., Banks, C., Duncan, C., Linksted, P., Hume, A., Stables, C., Mayor, C., Caldwell, J., Wilde, K. & Cole, C. & 1 others, Jefferson, E. (Lead / Corresponding author), 9 Mar 2022, In: Journal of Medical Internet Research. 24, 3, 16 p., e31684.

Research output: Contribution to journal › Article › peer-review

Open Access

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8 Citations (Scopus)

206 Downloads (Pure)

Integrated methylome and phenome study of the circulating proteome reveals markers pertinent to brain health

Gadd, D. A., Hillary, R. F., McCartney, D. L., Shi, L., Stolicyn, A., Robertson, N., Walker, R. M., McGeachan, R. I., Campbell, A., Shen, X., Barbu, M. C., Green, C., Morris, S. W., Harris, M. A., Backhouse, E. V. .., Wardlaw, J. M., Steele, J. D., Oyarzún, D. A., Muniz-Terrera, G. & Ritchie, C. & 9 others, Nevado-Holgado, A. J., Chandra, T., Hayward, C., Evans, K. L., Porteous, D. J., Cox, S. R., Whalley, H. C., McIntosh, A. M. & Marioni, R. E. (Lead / Corresponding author), 9 Aug 2022, In: Nature Communications. 13, 14 p., 4670.

Research output: Contribution to journal › Article › peer-review

Open Access

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15 Citations (Scopus)

72 Downloads (Pure)

Next-Generation Capabilities in Trusted Research Environments: Interview Study

Kavianpour, S., Sutherland, J. (Lead / Corresponding author), Mansouri-Benssassi, E., Coull, N. & Jefferson, E., 20 Sept 2022, In: Journal of Medical Internet Research. 24, 9, 14 p., e33720.

Research output: Contribution to journal › Article › peer-review

Open Access

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10 Citations (Scopus)

120 Downloads (Pure)

2021

A National Network of Safe Havens: A Scottish Perspective

Gao, C., McGilchrist, M., Mumtaz, S., Hall, C., Anderson, L., Zurowski, J., Gordon, S., Lumsden, J., Munro, V., Wozniak, A., Sibley, M., Banks, C., Duncan, C., Linksted, P., Hume, A., Stables, C., Mayor, C., Caldwell, J., Wilde, K. & Cole, C. & 1 others, Jefferson, E. (Lead / Corresponding author), 9 Jul 2021, JMIR Publications Inc.

Research output: Working paper/Preprint › Preprint

Open Access

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324 Downloads (Pure)

An overview of the National COVID-19 Chest Imaging Database: data quality and cohort analysis

Cushnan, D. (Lead / Corresponding author), Bennett, O., Berka, R., Bertolli, O., Chopra, A., Dorgham, S., Favaro, A., Ganepola, T., Halling-Brown, M., Imreh, G., Jacob, J., Jefferson, E., Lemarchand, F., Schofield, D., Wyatt, J. C., Nov 2021, In: GigaScience. 10, 11, 20 p., giab076.

Research output: Contribution to journal › Review article › peer-review

Open Access

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6 Citations (Scopus)

109 Downloads (Pure)

An overview of the National COVID-19 Chest Imaging Database: data quality and cohort analysis

Cushnan, D. (Lead / Corresponding author), Bennett, O., Berka, R., Bertolli, O., Chopra, A., Dorgham, S., Favaro, A., Ganepola, T., Halling-Brown, M., Imreh, G., Jacob, J., Jefferson, E., Lemarchand, F., Schofield, D., Wyatt, J. C., 4 Mar 2021, medRxiv, 37 p.

Research output: Working paper/Preprint › Preprint

Identification of plasma proteins relating to brain neurodegeneration and vascular pathology in cognitively normal individuals

Shi, L. (Lead / Corresponding author), Buchanan, C., Cox, S. R., Hillary, R. F., Marioni, R. E., Campbell, A., Hayward, C., Stolicyn, A., Whalley, H. C., Waymont, J. M. J., Waiter, G. D., Backhouse, E. V. .., Steele, D., Mcintosh, A., Lovestone, S., Buckley, N. J. & Nevado-Holgado, A. J., 2021, In: Alzheimer's & Dementia: Diagnosis, Assessment & Disease Monitoring. 13, 1, 12 p., e12240.

Research output: Contribution to journal › Article › peer-review

Open Access

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5 Citations (Scopus)

96 Downloads (Pure)

Towards nationally curated data archives for clinical radiology image analysis at scale: Learnings from national data collection in response to a pandemic

Cushnan, D. (Lead / Corresponding author), Berka, R., Bertolli, O., Williams, P., Schofield, D., Joshi, I., Favaro, A., Halling-Brown, M., Imreh, G., Jefferson, E., Sebire, N., Reilly, G., Rodrigues, J. C. L., Robinson, G., Copley, S., Malik, R., Bloomfield, C., Gleeson, F., Crotty, M. & Denton, E. & 14 others, Dickson, J., Leeming, G., Hardwick, H. E., Baillie, K., Openshaw, P. J. M., Semple, M. G., Rubin, C., Howlett, A., Rockall, A. G., Bhayat, A., Fascia, D., Sudlow, C. & Jacob, J., Nov 2021, In: Digital Health. 7, 12 p.

Research output: Contribution to journal › Article › peer-review

Open Access

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7 Citations (Scopus)

91 Downloads (Pure)

Using machine learning approaches for multi-omics data analysis: A review

Reel, P. S., Reel, S., Pearson, E., Trucco, E. & Jefferson, E. (Lead / Corresponding author), Jul 2021, In: Biotechnology Advances. 49, 24 p., 107739.

Research output: Contribution to journal › Review article › peer-review

Open Access

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346 Citations (Scopus)

4651 Downloads (Pure)

2020

An extensible big data software architecture managing a research resource of real-world clinical radiology data linked to other health data from the whole Scottish population

Nind, T., Sutherland, J., McAllister, G., Hardy, D., Hume, A., MacLeod, R., Caldwell, J., Krueger, S., Tramma, L., Teviotdale, R., Abdelatif, M., Gillen, K., Ward, J., Scobbie, D., Baillie, I., Brooks, A., Prodan, B., Kerr, W., Sloan-Murphy, D. & Rodriguez Herrera, J. & 7 others, McManus, D., Morris, C., Sinclair, C., Baxter, R., Parsons, M., Morris, A. & Jefferson, E. (Lead / Corresponding author), Oct 2020, In: Giga Science. 9, 10, 13 p., giaa095.

Research output: Contribution to journal › Article › peer-review

Open Access

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13 Citations (Scopus)

116 Downloads (Pure)

Monitoring indirect impact of COVID-19 pandemic on services for cardiovascular diseases in the UK

CVD-COVID-UK Consortium, Ball, S., Banerjee, A. (Lead / Corresponding author), Berry, C., Boyle, J., Bray, B., Bradlow, W., Chaudhry, A., Crawley, R., Danesh, J., Denniston, A., Falter, F., Figueroa, J. D., Hall, C., Hemingway, H., Jefferson, E., Johnson, T., King, G., Lee, K. K. & McKean, P. & 14 others, Mason, S., Mills, N. L., Pearson, E., Pirmohamed, M., Poon, M. T. C., Priedon, R., Shah, A., Sofat, R., Sterne, J. A. C., Strachan, F. E., Sudlow, C. L. M. (Lead / Corresponding author), Szarka, Z., Whiteley, W. & Wyatt, M., 1 Dec 2020, In: Heart (British Cardiac Society). 106, 24, p. 1890-1897 8 p.

Research output: Contribution to journal › Article › peer-review

Open Access

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81 Citations (Scopus)

60 Downloads (Pure)

Using imaging to combat a pandemic: rationale for developing the UK National COVID-19 Chest Imaging Database

Jacob, J. (Lead / Corresponding author), Alexander, D., Baillie, J. K., Berka, R., Bertolli, O., Blackwood, J., Buchan, I., Bloomfield, C., Cushnan, D., Docherty, A., Edey, A., Favaro, A., Gleeson, F., Halling-Brown, M., Hare, S., Jefferson, E., Johnstone, A., Kirby, M., Mcstay, R. & Nair, A. & 11 others, Openshaw, P. J. M., Parker, G., Reilly, G., Robinson, G., Roditi, G., Rodrigues, J. C. L., Sebire, N., Semple, M. G., Sudlow, C., Woznitza, N. & Joshi, I., 1 Aug 2020, In: European Respiratory Journal. 56, 2, 15 p., 2001809.

Research output: Contribution to journal › Article › peer-review

Open Access

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22 Citations (Scopus)

104 Downloads (Pure)

2019

Investigating the Relationship Between Type 2 Diabetes and Dementia Using Electronic Medical Records in the GoDARTS Bioresource

Doney, A. S. F. (Lead / Corresponding author), Bonney, W., Jefferson, E., Walesby, K. E., Bittern, R., Trucco, E., Connelly, P., McCrimmon, R. J. & Palmer, C. N. A., Oct 2019, In: Diabetes Care. 42, 10, p. 1973-1980 8 p.

Research output: Contribution to journal › Article › peer-review

Open Access

10 Citations (Scopus)

The challenges of assembling, maintaining and making available large data sets of clinical data for research

Jefferson, E. R. & Trucco, E., 2019, Computational Retinal Image Analysis: Tools, Applications and Perspectives. Trucco, E., MacGillivray, T. & Xu, Y. (eds.). Academic Press, p. 429-444 16 p. (The Elsevier and MICCAI Society Book Series).

Research output: Chapter in Book/Report/Conference proceeding › Chapter

4 Citations (Scopus)

MICA: InterdisciPlInary Collaboration for EfficienT and Effective Use of Clinical Images in Big Data Health Care RESearch: PICTURES (Programme Grant) (Joint with Universities of Edinburgh and Abertay)

Research output

Search results