The Arabidopsis Epitranscriptome (Joint with University of Nottingham)

Barton, Geoffrey (Investigator)
Simpson, Gordon (Investigator)

Project Details

Status	Finished
Effective start/end date	1/04/15 → 31/03/19

Funding

Biotechnology and Biological Sciences Research Council (BB/M010066/1): £800,599.00

9 Article

2passtools: two-pass alignment using machine-learning-filtered splice junctions increases the accuracy of intron detection in long-read RNA sequencing
Parker, M. T., Knop, K., Barton, G. J. & Simpson, G. G., 1 Mar 2021, In: Genome Biology. 22, 1, 24 p., 72.
Research output: Contribution to journal › Article › peer-review

Open Access
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19 Downloads (Pure)
Nanopore direct RNA sequencing maps the complexity of Arabidopsis mRNA processing and m6A modification
Parker, M. T., Knop, K., Sherwood, A. V., Schurch, N. J., Mackinnon, K., Gould, P. D., Hall, A. J. W., Barton, G. J. & Simpson, G. G., 14 Jan 2020, In: eLife. 9, p. 1-35 35 p., e49658.
Research output: Contribution to journal › Article › peer-review

Open Access
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37 Citations (Scopus)

108 Downloads (Pure)
Detection and Mitigation of Spurious Antisense RNA-seq Reads with RoSA
Mourão, K., Schurch, N. J., Lukoszek, R., Froussios, K., Mackinnon, K., Duc, C., Simpson, G. & Barton, G., 7 Jun 2019, In: F1000 Research. 8, p. 1-7 7 p., 819.
Research output: Contribution to journal › Article › peer-review

Open Access
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135 Downloads (Pure)