The Non-Coding Arabidopsis Genome

Barton, Geoffrey (Investigator)
Simpson, Gordon (Investigator)

Status	Finished
Effective start/end date	1/07/12 → 31/12/15

Funding

(BB/J00247X/1): £792,345.00

3 Article

2passtools: two-pass alignment using machine-learning-filtered splice junctions increases the accuracy of intron detection in long-read RNA sequencing
Parker, M. T., Knop, K., Barton, G. J. & Simpson, G. G., 1 Mar 2021, In: Genome Biology. 22, 1, 24 p., 72.
Research output: Contribution to journal › Article › peer-review

Open Access
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2 Citations (Scopus)

93 Downloads (Pure)
Widespread premature transcription termination of Arabidopsis thaliana NLR genes by the spen protein FPA
Parker, M., Knop, K., Zacharaki, V., Sherwood, A., Tomé, D., Yu, X., Martin, P., Beynon, J., Michaels, S., Barton, G. J. & Simpson, G. G., 12 May 2021, In: eLife. 10, 36 p., e65537.
Research output: Contribution to journal › Article › peer-review

Open Access
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6 Citations (Scopus)

103 Downloads (Pure)
How well do RNA-Seq differential gene expression tools perform in a complex eukaryote? A case study in Arabidopsis thaliana
Froussios, K., Schurch, N., Mackinnon, K., Gierlinski, M., Duc, C., Simpson, G. G. & Barton, G. J., 15 Sep 2019, In: Bioinformatics. 35, 18, p. 3372-3377 6 p.
Research output: Contribution to journal › Article › peer-review

Open Access
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2 Citations (Scopus)

91 Downloads (Pure)