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Discovery of type II inhibitors of tgfβ-activated kinase 1 (TAK1) and mitogen-activated protein kinase kinase kinase kinase 2 (MAP4K2)

  • Li Tan
  • , Tyzoon Nomanbhoy
  • , Deepak Gurbani
  • , Matthew Patricelli
  • , John Hunter
  • , Jiefei Geng
  • , Lina Herhaus
  • , Jianming Zhang
  • , Eduardo Pauls
  • , Youngjin Ham
  • , Hwan Geun Choi
  • , Ting Xie
  • , Xianming Deng
  • , Sara J. Buhrlage
  • , Taebo Sim
  • , Philip Cohen
  • , Gopal Sapkota
  • , Kenneth D. Westover
  • , Nathanael S. Gray

Research output: Contribution to journalArticlepeer-review

Abstract

We developed a pharmacophore model for type II inhibitors that was used to guide the construction of a library of kinase inhibitors. Kinome-wide selectivity profiling of the library resulted in the identification of a series of 4-substituted 1H-pyrrolo[2,3-b]pyridines that exhibited potent inhibitory activity against two mitogen-activated protein kinases (MAPKs), TAK1 (MAP3K7) and MAP4K2, as well as pharmacologically well interrogated kinases such as p38α (MAPK14) and ABL. Further investigation of the structure-activity relationship (SAR) resulted in the identification of potent dual TAK1 and MAP4K2 inhibitors such as 1 (NG25) and 2 as well as MAP4K2 selective inhibitors such as 16 and 17. Some of these inhibitors possess good pharmacokinetic properties that will enable their use in pharmacological studies in vivo. A 2.4 Å cocrystal structure of TAK1 in complex with 1 confirms that the activation loop of TAK1 assumes the DFG-out conformation characteristic of type II inhibitors.

Original languageEnglish
Pages (from-to)183-196
Number of pages14
JournalJournal of Medicinal Chemistry
Volume58
Issue number1
Early online date17 Jul 2014
DOIs
Publication statusPublished - 8 Jan 2015

ASJC Scopus subject areas

  • Molecular Medicine
  • Drug Discovery

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