Distinct and overlapping sets of SUMO-1 and SUMO-2 target proteins revealed by quantitative proteomics

Alfred C.O. Vertegaal (Lead / Corresponding author), Jens S. Andersen, Stephen C. Ogg, Ronald T. Hay, Matthias Mann, Angus I. Lamond

    Research output: Contribution to journalArticle

    223 Citations (Scopus)

    Abstract

    The small ubiquitin-like modifier (SUMO) family in vertebrates includes three different family members that are conjugated as post-translational modifications to target proteins. SUMO-2 and -3 are nearly identical but differ substantially from SUMO-1. We used quantitative proteomics to investigate the target protein preferences of SUMO-1 and SUMO-2. HeLa cells were established that stably express His6-SUMO-1 or His6-SUMO-2. These cell lines and control HeLa cells were labeled with stable arginine isotopes, and His6-SUMOs were enriched from lysates using immobilized metal affinity chromatography. 53 SUMO-conjugated proteins were identified, including 44 novel SUMO targets. 25 proteins were preferentially conjugated to SUMO-1, 19 were preferentially conjugated to SUMO-2, and nine proteins were conjugated to both SUMO-1 and SUMO-2. SART1 was confirmed by immuno-blotting to have both SUMO-1- and SUMO-2-linked forms at similar levels. SUMO-1 and SUMO-2 are thus shown to have distinct and overlapping sets of target proteins, indicating that SUMO-1 and SUMO-2 may have both redundant and non-redundant cellular functions. Interestingly, 14 of the 25 SUMO-1-conjugated proteins contain zinc fingers. Although both SUMO family members play roles in many cellular processes, our data show that sumoylation is strongly associated with transcription because nearly one-third of the identified target proteins are putative transcriptional regulators.

    Original languageEnglish
    Pages (from-to)2298-2310
    Number of pages13
    JournalMolecular and Cellular Proteomics
    Volume5
    Issue number12
    DOIs
    Publication statusPublished - 1 Dec 2006

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