Draft genome of the oomycete pathogen Phytophthora cactorum strain LV007 isolated from European beech (Fagus sylvatica)

Laura J. Grenville-Briggs, Sandeep K. Kushwaha, Michelle R. Cleary, Johanna Witzell, Eugene I. Savenkov, Stephen C. Whisson, Aakash Chawade, Ramesh R. Vetukuri (Lead / Corresponding author)

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Abstract

Phytophthora cactorum is a broad host range phytopathogenic oomycete. P. cactorum strain LV007 was isolated from a diseased European Beech (Fagus sylvatica) in Malmö, Sweden in 2016. The draft genome of P. cactorum strain LV007 is 67.81 Mb. It contains 15,567 contigs and 21,876 predicted protein-coding genes. As reported for other phytopathogenic Phytophthora species, cytoplasmic effector proteins including RxLR and CRN families were identified. The genome sequence has been deposited at DDBJ/ENA/GenBank under the accession NBIJ00000000. The version described in this paper is version NBIJ01000000.

Original languageEnglish
Pages (from-to)155-156
Number of pages2
JournalGenomics Data
Volume12
Early online date12 May 2017
DOIs
Publication statusPublished - Jun 2017

Keywords

  • Journal article

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    Grenville-Briggs, L. J., Kushwaha, S. K., Cleary, M. R., Witzell, J., Savenkov, E. I., Whisson, S. C., Chawade, A., & Vetukuri, R. R. (2017). Draft genome of the oomycete pathogen Phytophthora cactorum strain LV007 isolated from European beech (Fagus sylvatica). Genomics Data, 12, 155-156. https://doi.org/10.1016/j.gdata.2017.05.010