Projects per year
Abstract
Barley genomic resources are increasing rapidly, with the publication of a barley pangenome as one of the latest developments. Two-row spring barley cultivars are intensely studied as they are the source of high-quality grain for malting and distilling. Here we provide data from a European two-row spring barley population containing 209 different genotypes registered for the UK market between 1830 to 2014. The dataset encompasses RNA-sequencing data from six different tissues across a range of barley developmental stages, phenotypic datasets from two consecutive years of field-grown trials in the United Kingdom, Germany and the USA; and whole genome shotgun sequencing from all cultivars, which was used to complement the RNA-sequencing data for variant calling. The outcomes are a filtered SNP marker file, a phenotypic database and a large gene expression dataset providing a comprehensive resource which allows for downstream analyses like genome wide association studies or expression associations.
Original language | English |
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Article number | 66 |
Number of pages | 12 |
Journal | Scientific Data |
Volume | 11 |
Issue number | 1 |
DOIs | |
Publication status | Published - 12 Jan 2024 |
Keywords
- Genome-Wide Association Study
- Genomics
- Genotype
- Hordeum/genetics
- RNA
- Genome, Plant
ASJC Scopus subject areas
- Information Systems
- Education
- Library and Information Sciences
- Statistics and Probability
- Computer Science Applications
- Statistics, Probability and Uncertainty
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- 1 Finished
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16 ERA-CAPS Barley Yield Associated Networks (Joint with IPK Gatersleben as lead and University of Minnesota)
Waugh, R. (Investigator)
Biotechnology and Biological Sciences Research Council
13/08/18 → 30/06/22
Project: Research