ISO 23494: Biotechnology – Provenance Information Model for Biological Specimen And Data

Rudolf Wittner (Lead / Corresponding author), Petr Holub, Heimo Müller, Joerg Geiger, Carole Goble, Stian Soiland-Reyes, Luca Pireddu, Francesca Frexia, Cecilia Mascia, Elliot Fairweather, Jason R. Swedlow, Josh Moore, Caterina Strambio, David Grunwald, Hiroki Nakae

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

    3 Citations (Scopus)

    Abstract

    Exchange of research data and samples in biomedical research has become a common phenomenon, demanding for their effective quality assessment. At the same time, several reports address reproducibility of research, where history of biological samples (acquisition, processing, transportation, storage, and retrieval) and data history (data generation and processing) define their fitness for purpose, and hence their quality. This project aims to develop a comprehensive W3C PROV based provenance information standard intended for the biomedical research domain. The standard is being developed by the working group 5 (“data processing and integration”) of the ISO (International Standardisation Organisation) technical committee 276 “biotechnology”. The outcome of the project will be published in parts as international standards or technical specifications. The poster informs about the goals of the standardisation activity, presents the proposed structure of the standards, briefly describes its current state and outlines its future development and open issues.

    Original languageEnglish
    Title of host publicationProvenance and Annotation of Data and Processes
    Subtitle of host publication8th and 9th International Provenance and Annotation Workshop, IPAW 2020 + IPAW 2021, Proceedings
    EditorsBoris Glavic, Vanessa Braganholo, David Koop
    Place of PublicationSwitzerland
    PublisherSpringer Nature Switzerland AG
    Pages222-225
    Number of pages4
    Edition1
    ISBN (Electronic)9783030809607
    ISBN (Print)9783030809591
    DOIs
    Publication statusPublished - 2021
    Event8th and 9th International Provenance and Annotation Workshop, IPAW 2020 and IPAW 2021 held as part of ProvenanceWeek in 2020 and 2021 - Virtual, Online
    Duration: 19 Jul 202022 Jul 2020

    Publication series

    NameLecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)
    Volume12839
    ISSN (Print)0302-9743
    ISSN (Electronic)1611-3349

    Conference

    Conference8th and 9th International Provenance and Annotation Workshop, IPAW 2020 and IPAW 2021 held as part of ProvenanceWeek in 2020 and 2021
    CityVirtual, Online
    Period19/07/2022/07/20

    Keywords

    • Biotechnology
    • Provenance
    • Standardization

    ASJC Scopus subject areas

    • Theoretical Computer Science
    • General Computer Science

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