Reformatter for EMBL's HLA aligner

Christian Cole (Developer), Roy Mudie (Developer)

Research output: Non-textual formSoftware

Abstract

The EMBL Immuno Polymorphism Database has a useful alignment tool https://www.ebi.ac.uk/ipd/imgt/hla/align.html, but generates output in a format which isn't very portable.

Use the script herein to turn it into a more useful FASTA file.
Original languageEnglish
Publication statusPublished - 29 May 2018

Fingerprint

Polymorphism
Databases

Keywords

  • HLA
  • Bookmarklet
  • Extension

Cite this

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abstract = "The EMBL Immuno Polymorphism Database has a useful alignment tool https://www.ebi.ac.uk/ipd/imgt/hla/align.html, but generates output in a format which isn't very portable.Use the script herein to turn it into a more useful FASTA file.",
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author = "Christian Cole and Roy Mudie",
year = "2018",
month = "5",
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AB - The EMBL Immuno Polymorphism Database has a useful alignment tool https://www.ebi.ac.uk/ipd/imgt/hla/align.html, but generates output in a format which isn't very portable.Use the script herein to turn it into a more useful FASTA file.

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KW - Bookmarklet

KW - Extension

M3 - Software

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