Reformatter for EMBL's HLA aligner

Christian Cole; Roy Mudie

Reformatter for EMBL's HLA aligner

Christian Cole (Developer), Roy Mudie (Developer)

Leverhulme Research Centre for Forensic Science

Research output: Non-textual form › Software

Abstract

The EMBL Immuno Polymorphism Database has a useful alignment tool https://www.ebi.ac.uk/ipd/imgt/hla/align.html, but generates output in a format which isn't very portable.

Use the script herein to turn it into a more useful FASTA file.

Original language	English
Publication status	Published - 29 May 2018

Keywords

HLA
Bookmarklet
Extension

ASJC Scopus subject areas

Software
Molecular Biology

Access to Document

https://github.com/LRCFS/HLA_reformatterLicence: Other

Cite this

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title = "Reformatter for EMBL's HLA aligner",

abstract = "The EMBL Immuno Polymorphism Database has a useful alignment tool https://www.ebi.ac.uk/ipd/imgt/hla/align.html, but generates output in a format which isn't very portable.Use the script herein to turn it into a more useful FASTA file.",

keywords = "HLA, Bookmarklet, Extension",

author = "Christian Cole and Roy Mudie",

year = "2018",

month = may,

day = "29",

language = "English",

}

TY - ADVS

T1 - Reformatter for EMBL's HLA aligner

A2 - Cole, Christian

A2 - Mudie, Roy

PY - 2018/5/29

Y1 - 2018/5/29

N2 - The EMBL Immuno Polymorphism Database has a useful alignment tool https://www.ebi.ac.uk/ipd/imgt/hla/align.html, but generates output in a format which isn't very portable.Use the script herein to turn it into a more useful FASTA file.

AB - The EMBL Immuno Polymorphism Database has a useful alignment tool https://www.ebi.ac.uk/ipd/imgt/hla/align.html, but generates output in a format which isn't very portable.Use the script herein to turn it into a more useful FASTA file.

KW - HLA

KW - Bookmarklet

KW - Extension

M3 - Software

ER -

Reformatter for EMBL's HLA aligner

Abstract

Keywords

ASJC Scopus subject areas

Access to Document

Fingerprint

Cite this