Small changes in ambient temperature affect alternative splicing in Arabidopsis thaliana

Corinna Streitner, Craig G. Simpson, Paul Shaw, Selahattin Danisman, John W. S. Brown, Dorothee Staiger

    Research output: Contribution to journalArticle

    23 Citations (Scopus)

    Abstract

    Alternative splicing (AS) gives rise to multiple mRNA isoforms from the same gene, providing possibilities to reg-ulate gene expression beyond the level of transcription. In a recent paper in Nucleic Acids Research we used a high resolution RT-PCR based panel to study changes in AS patterns in plants with altered levels of an hnRNP-like RNA-binding protein in Arabidopsis thaliana. Furthermore, we detected significant changes in AS pat-terns between different Arabidopsis eco-types. Here we investigated how small changes in ambient temperature affect AS. We found significant changes in AS for 12 of 28 investigated events (43%) upon transfer of Arabidopsis plants from 20°C to 16°C and for 6 of the 28 inves-tigated events (21%) upon transfer from 20°C to 24°C.
    Original languageEnglish
    Pages (from-to)e24638.1-e24638.7
    Number of pages7
    JournalPlant Signaling and Behavior
    Volume8
    Issue number7
    DOIs
    Publication statusPublished - Jul 2013

    Fingerprint

    alternative splicing
    ambient temperature
    Arabidopsis thaliana
    Arabidopsis
    RNA-binding proteins
    Laridae
    nucleic acids
    transcription (genetics)
    reverse transcriptase polymerase chain reaction
    gene expression
    genes

    Cite this

    Streitner, Corinna ; Simpson, Craig G. ; Shaw, Paul ; Danisman, Selahattin ; Brown, John W. S. ; Staiger, Dorothee. / Small changes in ambient temperature affect alternative splicing in Arabidopsis thaliana. In: Plant Signaling and Behavior. 2013 ; Vol. 8, No. 7. pp. e24638.1-e24638.7.
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    Streitner, C, Simpson, CG, Shaw, P, Danisman, S, Brown, JWS & Staiger, D 2013, 'Small changes in ambient temperature affect alternative splicing in Arabidopsis thaliana', Plant Signaling and Behavior, vol. 8, no. 7, pp. e24638.1-e24638.7. https://doi.org/10.4161/psb.24638

    Small changes in ambient temperature affect alternative splicing in Arabidopsis thaliana. / Streitner, Corinna; Simpson, Craig G.; Shaw, Paul; Danisman, Selahattin; Brown, John W. S.; Staiger, Dorothee.

    In: Plant Signaling and Behavior, Vol. 8, No. 7, 07.2013, p. e24638.1-e24638.7.

    Research output: Contribution to journalArticle

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