The genome of the yellow potato cyst nematode Globodera rostochiensis reveals insights into the basis of parasitism and virulence

Sebastian Eves-van den Akker; Dominik R. Laetsch; Peter Thorpe; Catherine J. Lilley; Etienne G. J. Danchin; Martine Da Rocha; Corinne Rancurel; Nancy E. Holroyd; James Cotton; Amir Szitenberg; Eric Grenier; Josselin Montarry; Benjamin Mimee; Marc-Olivier Duceppe; Ian Boyes; Jessica M.C. Marvin; Laura M. Jones; Hazijah B. Yusup; Joel Lafond-Lapalme; Magali Esquibet; Michael Sabeh; Michael Rott; Hein Overmars; Anna Finkers-Tomczak; Geert Smant; Georgios Koutsovoulos; Vivian Blok; Sophie Mantelin; Peter J. A. Cock; Wendy Phillips; Bernard Henrissat; Peter E. Urwin; Mark Blaxter; John T. Jones

doi:10.1186/s13059-016-0985-1

The genome of the yellow potato cyst nematode Globodera rostochiensis reveals insights into the basis of parasitism and virulence

Sebastian Eves-van den Akker (Lead / Corresponding author)
, Dominik R. Laetsch
, Peter Thorpe
, Catherine J. Lilley
, Etienne G. J. Danchin
, Martine Da Rocha
, Corinne Rancurel
, Nancy E. Holroyd
, James Cotton
, Amir Szitenberg
, Eric Grenier
, Josselin Montarry
, Benjamin Mimee
, Marc-Olivier Duceppe
, Ian Boyes
, Jessica M.C. Marvin
, Laura M. Jones
, Hazijah B. Yusup
, Joel Lafond-Lapalme
, Magali Esquibet

Michael Sabeh, Michael Rott, Hein Overmars, Anna Finkers-Tomczak, Geert Smant, Georgios Koutsovoulos, Vivian Blok, Sophie Mantelin, Peter J. A. Cock, Wendy Phillips, Bernard Henrissat, Peter E. Urwin, Mark Blaxter, John T. Jones

Plant Sciences

Research output: Contribution to journal › Article › peer-review

148 Citations (Scopus)

409 Downloads (Pure)

Abstract

The yellow potato cyst nematode, Globodera rostochiensis, is a devastating plant pathogen of global economic importance. This biotrophic parasite secretes effectors from pharyngeal glands, some of which were acquired by horizontal gene transfer, to manipulate host processes and promote parasitism. G. rostochiensis is classified into pathotypes with different plant resistance-breaking phenotypes.

Original language	English
Article number	124
Number of pages	23
Journal	Genome Biology
Volume	17
DOIs	https://doi.org/10.1186/s13059-016-0985-1
Publication status	Published - 10 Jun 2016

Keywords

Plant-parasitic nematode
Genome sequence
Virulence
Effectors
Horizontal gene transfer

Access to Document

10.1186/s13059-016-0985-1Licence: CC BY

Final Published Version
© 2016 The Author(s). Open Access This article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated.
Final published version, 3.33 MBLicence: CC BY

A Synthetic Biology Approach to Develop Durable Disease Resistance in Crops (Anniversary Fellowship)
Birch, P. (Investigator) & Eves-van den Akker, S. (Investigator)
Biotechnology and Biological Sciences Research Council
2/02/15 → 1/04/18
Project: Research

Data from: The genome of the yellow potato cyst nematode Globodera rostochiensis reveals insights into the basis of parasitism and virulence
Eves-van den Akker, S. (Creator), Laetsch, D. (Creator), Thorpe, P. (Creator), Lilley, C. (Creator), Danchin, E. (Creator), Da Rocha, M. (Creator), Rancurel, C. (Creator), Holroyd, N. (Creator), Cotton, J. (Creator), Szitenberg, A. (Creator), Grenier, E. (Creator), Montarry, J. (Creator), Mimee, B. (Creator), Duceppe, M.-O. (Creator), Boyes, I. (Creator), Marvin, J. (Creator), Jones, L. (Creator), Yusup, H. (Creator), Lafond-Lapalme, J. (Creator), Esquibet, M. (Creator), Sabeh, M. (Creator), Rott, M. (Creator), Overmars, H. (Creator), Finkers-Tomczak, A. (Creator), Smant, G. (Creator), Koutsovoulos, G. (Creator), Blok, V. (Creator), Mantelin, S. (Creator), Cock, P. (Creator), Phillips, W. (Creator), Henrissat, B. (Creator), Urwin, P. (Creator), Blaxter, M. (Creator) & Jones, J. (Creator), Dryad, 10 May 2017
DOI: 10.5061/dryad.4s5r6
Dataset

Cite this

Eves-van den Akker, S., Laetsch, D. R., Thorpe, P., Lilley, C. J., Danchin, E. G. J., Da Rocha, M., Rancurel, C., Holroyd, N. E., Cotton, J., Szitenberg, A., Grenier, E., Montarry, J., Mimee, B., Duceppe, M.-O., Boyes, I., Marvin, J. M. C., Jones, L. M., Yusup, H. B., Lafond-Lapalme, J., ... Jones, J. T. (2016). The genome of the yellow potato cyst nematode Globodera rostochiensis reveals insights into the basis of parasitism and virulence. Genome Biology, 17, Article 124. https://doi.org/10.1186/s13059-016-0985-1

@article{de90e03511f845e7ae375deaadfb8c1f,

title = "The genome of the yellow potato cyst nematode Globodera rostochiensis reveals insights into the basis of parasitism and virulence",

abstract = "The yellow potato cyst nematode, Globodera rostochiensis, is a devastating plant pathogen of global economic importance. This biotrophic parasite secretes effectors from pharyngeal glands, some of which were acquired by horizontal gene transfer, to manipulate host processes and promote parasitism. G. rostochiensis is classified into pathotypes with different plant resistance-breaking phenotypes.",

keywords = "Plant-parasitic nematode, Genome sequence, Virulence, Effectors, Horizontal gene transfer",

author = "\{Eves-van den Akker\}, Sebastian and Laetsch, \{Dominik R.\} and Peter Thorpe and Lilley, \{Catherine J.\} and Danchin, \{Etienne G. J.\} and \{Da Rocha\}, Martine and Corinne Rancurel and Holroyd, \{Nancy E.\} and James Cotton and Amir Szitenberg and Eric Grenier and Josselin Montarry and Benjamin Mimee and Marc-Olivier Duceppe and Ian Boyes and Marvin, \{Jessica M.C.\} and Jones, \{Laura M.\} and Yusup, \{Hazijah B.\} and Joel Lafond-Lapalme and Magali Esquibet and Michael Sabeh and Michael Rott and Hein Overmars and Anna Finkers-Tomczak and Geert Smant and Georgios Koutsovoulos and Vivian Blok and Sophie Mantelin and Cock, \{Peter J. A.\} and Wendy Phillips and Bernard Henrissat and Urwin, \{Peter E.\} and Mark Blaxter and Jones, \{John T.\}",

year = "2016",

month = jun,

day = "10",

doi = "10.1186/s13059-016-0985-1",

language = "English",

volume = "17",

journal = "Genome Biology",

issn = "1474-7596",

publisher = "BioMed Central",

}

Eves-van den Akker, S, Laetsch, DR, Thorpe, P, Lilley, CJ, Danchin, EGJ, Da Rocha, M, Rancurel, C, Holroyd, NE, Cotton, J, Szitenberg, A, Grenier, E, Montarry, J, Mimee, B, Duceppe, M-O, Boyes, I, Marvin, JMC, Jones, LM, Yusup, HB, Lafond-Lapalme, J, Esquibet, M, Sabeh, M, Rott, M, Overmars, H, Finkers-Tomczak, A, Smant, G, Koutsovoulos, G, Blok, V, Mantelin, S, Cock, PJA, Phillips, W, Henrissat, B, Urwin, PE, Blaxter, M & Jones, JT 2016, 'The genome of the yellow potato cyst nematode Globodera rostochiensis reveals insights into the basis of parasitism and virulence', Genome Biology, vol. 17, 124. https://doi.org/10.1186/s13059-016-0985-1

TY - JOUR

T1 - The genome of the yellow potato cyst nematode Globodera rostochiensis reveals insights into the basis of parasitism and virulence

AU - Eves-van den Akker, Sebastian

AU - Laetsch, Dominik R.

AU - Thorpe, Peter

AU - Lilley, Catherine J.

AU - Danchin, Etienne G. J.

AU - Da Rocha, Martine

AU - Rancurel, Corinne

AU - Holroyd, Nancy E.

AU - Cotton, James

AU - Szitenberg, Amir

AU - Grenier, Eric

AU - Montarry, Josselin

AU - Mimee, Benjamin

AU - Duceppe, Marc-Olivier

AU - Boyes, Ian

AU - Marvin, Jessica M.C.

AU - Jones, Laura M.

AU - Yusup, Hazijah B.

AU - Lafond-Lapalme, Joel

AU - Esquibet, Magali

AU - Sabeh, Michael

AU - Rott, Michael

AU - Overmars, Hein

AU - Finkers-Tomczak, Anna

AU - Smant, Geert

AU - Koutsovoulos, Georgios

AU - Blok, Vivian

AU - Mantelin, Sophie

AU - Cock, Peter J. A.

AU - Phillips, Wendy

AU - Henrissat, Bernard

AU - Urwin, Peter E.

AU - Blaxter, Mark

AU - Jones, John T.

PY - 2016/6/10

Y1 - 2016/6/10

N2 - The yellow potato cyst nematode, Globodera rostochiensis, is a devastating plant pathogen of global economic importance. This biotrophic parasite secretes effectors from pharyngeal glands, some of which were acquired by horizontal gene transfer, to manipulate host processes and promote parasitism. G. rostochiensis is classified into pathotypes with different plant resistance-breaking phenotypes.

AB - The yellow potato cyst nematode, Globodera rostochiensis, is a devastating plant pathogen of global economic importance. This biotrophic parasite secretes effectors from pharyngeal glands, some of which were acquired by horizontal gene transfer, to manipulate host processes and promote parasitism. G. rostochiensis is classified into pathotypes with different plant resistance-breaking phenotypes.

KW - Plant-parasitic nematode

KW - Genome sequence

KW - Virulence

KW - Effectors

KW - Horizontal gene transfer

U2 - 10.1186/s13059-016-0985-1

DO - 10.1186/s13059-016-0985-1

M3 - Article

C2 - 27286965

SN - 1474-7596

VL - 17

JO - Genome Biology

JF - Genome Biology

M1 - 124

ER -

The genome of the yellow potato cyst nematode Globodera rostochiensis reveals insights into the basis of parasitism and virulence

Abstract

Keywords

Access to Document

Fingerprint

Projects

A Synthetic Biology Approach to Develop Durable Disease Resistance in Crops (Anniversary Fellowship)

Datasets

Data from: The genome of the yellow potato cyst nematode Globodera rostochiensis reveals insights into the basis of parasitism and virulence

Cite this