UK CropNet: A collection of databases and bioinformatics resources for crop plant genomics

Jo Dicks, Mary Anderson, Linda Cardle, Sam Cartinhour, Matthew Couchman, Guy Davenport, Jeremy Dickson, Mike Gale, David Marshall, Sean May (Lead / Corresponding author), Hamish McWilliam, Andrew O'Malia, Helen Ougham, Martin Trick, Sean Walsh, Robbie Waugh

Research output: Contribution to journalArticle

14 Citations (Scopus)

Abstract

The UK Crop Plant Bioinformatics Network (UK CropNet) was established in 1996 in order to harness the extensive work in genome mapping in crop plants in the UK. Since this date we have published five databases from our central UK CropNet WWW site (http://synteny.nott.ac.uk/) with a further three to follow shortly. Our resource facilitates the identification and manipulation of agronomically important genes by laying a foundation for comparative analysis among crop plants and model species. In addition, we have developed a number of software tools that facilitate the visualisation and analysis of our data. Many of our tools are made freely available for use with both crop plant data and with data from other species.

Original languageEnglish
Pages (from-to)104-107
Number of pages4
JournalNucleic Acids Research
Volume28
Issue number1
DOIs
Publication statusPublished - 1 Jan 2000

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Genomics
Computational Biology
Databases
Chromosome Mapping
Software
Genes

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Dicks, J., Anderson, M., Cardle, L., Cartinhour, S., Couchman, M., Davenport, G., ... Waugh, R. (2000). UK CropNet: A collection of databases and bioinformatics resources for crop plant genomics. Nucleic Acids Research, 28(1), 104-107. https://doi.org/10.1093/nar/28.1.104
Dicks, Jo ; Anderson, Mary ; Cardle, Linda ; Cartinhour, Sam ; Couchman, Matthew ; Davenport, Guy ; Dickson, Jeremy ; Gale, Mike ; Marshall, David ; May, Sean ; McWilliam, Hamish ; O'Malia, Andrew ; Ougham, Helen ; Trick, Martin ; Walsh, Sean ; Waugh, Robbie. / UK CropNet : A collection of databases and bioinformatics resources for crop plant genomics. In: Nucleic Acids Research. 2000 ; Vol. 28, No. 1. pp. 104-107.
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Dicks, J, Anderson, M, Cardle, L, Cartinhour, S, Couchman, M, Davenport, G, Dickson, J, Gale, M, Marshall, D, May, S, McWilliam, H, O'Malia, A, Ougham, H, Trick, M, Walsh, S & Waugh, R 2000, 'UK CropNet: A collection of databases and bioinformatics resources for crop plant genomics', Nucleic Acids Research, vol. 28, no. 1, pp. 104-107. https://doi.org/10.1093/nar/28.1.104

UK CropNet : A collection of databases and bioinformatics resources for crop plant genomics. / Dicks, Jo; Anderson, Mary; Cardle, Linda; Cartinhour, Sam; Couchman, Matthew; Davenport, Guy; Dickson, Jeremy; Gale, Mike; Marshall, David; May, Sean (Lead / Corresponding author); McWilliam, Hamish; O'Malia, Andrew; Ougham, Helen; Trick, Martin; Walsh, Sean; Waugh, Robbie.

In: Nucleic Acids Research, Vol. 28, No. 1, 01.01.2000, p. 104-107.

Research output: Contribution to journalArticle

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Dicks J, Anderson M, Cardle L, Cartinhour S, Couchman M, Davenport G et al. UK CropNet: A collection of databases and bioinformatics resources for crop plant genomics. Nucleic Acids Research. 2000 Jan 1;28(1):104-107. https://doi.org/10.1093/nar/28.1.104