Abstract
Cyclo(L-Glu-L-Glu) has been crystallised in two different polymorphic forms. Both polymorphs are monoclinic, but form 1 is in space group P2(1) and form 2 is in space group C2. Raman scattering and FT-IR spectroscopic studies have been conducted for the N,O-protonated and deuterated derivatives. Raman spectra of orientated single crystals, solid-state and aqueous solution samples have also been recorded. The different hydrogen-bonding patterns for the two polymorphs have the greatest effect on vibrational modes with N-H and C=O stretching character. DFT (B3-LYP/cc-pVDZ) calculations of the isolated cyclo(L-Glu-L-Glu) molecule predict that the minimum energy structure, assuming C-2 symmetry, has a boat conformation for the diketopiperazine ring with the two L-Glu side chains being folded above the ring. The calculated geometry is in good agreement with the X-ray crystallographic structures for both polymorphs. Normal coordinate analysis has facilitated the band assignments for the experimental vibrational spectra. Copyright (C) 2009 John Wiley & Sons, Ltd.
Original language | English |
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Pages (from-to) | 288-302 |
Number of pages | 15 |
Journal | Journal of Raman Spectroscopy |
Volume | 41 |
Issue number | 3 |
DOIs | |
Publication status | Published - Mar 2010 |
Keywords
- cyclic di-amino acid peptides
- X-ray crystallography
- ab initio calculations
- vibrational spectra
- ALANYL-L-ALANYL
- CYCLIC DIPEPTIDES
- CONFORMATION
- DIKETOPIPERAZINE
- POLYPEPTIDES
- PROTEINS
- DENSITY