Advanced fibre-based endoscopy for biophotonics applications

  • Ivo Jorge Oliveira Teixeira Leite

Student thesis: Doctoral ThesisDoctor of Philosophy


Despite the tremendous advances witnessed in light microscopy over the past two decades, non-invasive optical imaging is still limited to penetration depths smaller than 1 mm into tissue. Multiple scattering caused by the refractive index inhomogeneities of biological matter rapidly distort any optical wavefront prop-agating through, rendering tissues opaque. Such turbidity restricts imaging, as well as other biophotonics techniques, to the most superficial layers of tissue.

A perspective strategy to overcome the turbidity of living matter exploits holographic light control in multimode optical fibres. This allows devising min-imally invasive imaging probes with footprints far bellow those of conventional endoscopes, as well as enhanced spatial resolution up to the diffraction limit de-termined by the numerical aperture (NA) of the fibre.

In this Thesis, high-resolution focussing is demonstrated with unprecedented ability across novel specialty fibres offering very-high NAs, by devising a system and methodologies which allow counteracting the severe mode-dependent loss affecting such fibres. The high quality and NA of the generated foci is capable of 3D optical confinement of dielectric microparticles, thus enabling the deliv-ery of holographic optical tweezers introduced through a bare optical fibre with cross-section comparable to a single cell. The holographic methods developed allow the manipulation of complex 3D arrangements of particles, as well as their independent positioning with nanometre-scale precision in all three dimensions.

Separately, a multimode fibre based deep-brain fluorescence imaging is demonstrated in animal models in vivo, allowing the identification of neuronal structures at depths exceeding 2 mm and resolving fine details down to ≈1 µm resolution.
Date of Award2018
Original languageEnglish
SupervisorAlfred Cuschieri (Supervisor) & Tomas Cizmar (Supervisor)

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